RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 UGT2B15P54855 530 aa15.39■□□□□ 0.05
EXOSC3-203ENST00000465229 CDC42P60953 191 aa15.39■□□□□ 0.05
EXOSC3-203ENST00000465229 ALDH6A1Q02252 535 aaKnown RBP15.39■□□□□ 0.05
EXOSC3-203ENST00000465229 NPTX1Q15818 432 aa15.39■□□□□ 0.05
EXOSC3-203ENST00000465229 ASB18Q6ZVZ8 466 aa15.39■□□□□ 0.05
EXOSC3-203ENST00000465229 PRSS48Q7RTY5 328 aa15.39■□□□□ 0.05
EXOSC3-203ENST00000465229 P3H2Q8IVL5 708 aa15.39■□□□□ 0.05
EXOSC3-203ENST00000465229 FAM81AQ8TBF8 368 aa15.39■□□□□ 0.05
EXOSC3-203ENST00000465229 GTPBP3Q969Y2 492 aaKnown RBP15.39■□□□□ 0.05
EXOSC3-203ENST00000465229 ARSGQ96EG1 525 aa15.39■□□□□ 0.05
EXOSC3-203ENST00000465229 TMEM41AQ96HV5 264 aa15.39■□□□□ 0.05
EXOSC3-203ENST00000465229 MPP4Q96JB8 637 aa15.39■□□□□ 0.05
EXOSC3-203ENST00000465229 KLHDC3Q9BQ90 382 aa15.39■□□□□ 0.05
EXOSC3-203ENST00000465229 FAM173AQ9BQD7 235 aa15.39■□□□□ 0.05
EXOSC3-203ENST00000465229 ZNF71Q9NQZ8 489 aaPredicted RBP15.39■□□□□ 0.05
EXOSC3-203ENST00000465229 MED11Q9P086 117 aa15.39■□□□□ 0.05
EXOSC3-203ENST00000465229 PPP4R1LQ9P1A2 415 aa15.39■□□□□ 0.05
EXOSC3-203ENST00000465229 ICAM5Q9UMF0 924 aa15.39■□□□□ 0.05
EXOSC3-203ENST00000465229 KLF13Q9Y2Y9 288 aaPredicted RBP15.39■□□□□ 0.05
EXOSC3-203ENST00000465229 PCDHGB6Q9Y5F9 930 aa15.39■□□□□ 0.05
EXOSC3-203ENST00000465229 GNB5O14775 395 aa15.38■□□□□ 0.05
EXOSC3-203ENST00000465229 SNPHO15079 494 aa15.38■□□□□ 0.05
EXOSC3-203ENST00000465229 RGS10O43665 173 aa15.38■□□□□ 0.05
EXOSC3-203ENST00000465229 OR10H3O60404 316 aa15.38■□□□□ 0.05
EXOSC3-203ENST00000465229 TPST2O60704 377 aa15.38■□□□□ 0.05
EXOSC3-203ENST00000465229 FAM20BO75063 409 aa15.38■□□□□ 0.05
EXOSC3-203ENST00000465229 IFNA8P32881 189 aa15.38■□□□□ 0.05
EXOSC3-203ENST00000465229 ACAA2P42765 397 aaKnown RBP15.38■□□□□ 0.05
EXOSC3-203ENST00000465229 ZNF136P52737 540 aa15.38■□□□□ 0.05
EXOSC3-203ENST00000465229 HOXC5Q00444 222 aa15.38■□□□□ 0.05
EXOSC3-203ENST00000465229 FOXO1Q12778 655 aa15.38■□□□□ 0.05
EXOSC3-203ENST00000465229 PIN1Q13526 163 aaPredicted RBP15.38■□□□□ 0.05
EXOSC3-203ENST00000465229 PTGES3Q15185 160 aaKnown RBP15.38■□□□□ 0.05
EXOSC3-203ENST00000465229 ST3GAL2Q16842 350 aa15.38■□□□□ 0.05
EXOSC3-203ENST00000465229 TIGD3Q6B0B8 471 aa15.38■□□□□ 0.05
EXOSC3-203ENST00000465229 PGBD2Q6P3X8 592 aa15.38■□□□□ 0.05
EXOSC3-203ENST00000465229 Q6ZS92 163 aa15.38■□□□□ 0.05
EXOSC3-203ENST00000465229 EXD3Q8N9H8 876 aa15.38■□□□□ 0.05
EXOSC3-203ENST00000465229 TMEM178AQ8NBL3 297 aa15.38■□□□□ 0.05
EXOSC3-203ENST00000465229 ZNF540Q8NDQ6 660 aa15.38■□□□□ 0.05
EXOSC3-203ENST00000465229 TOR1AIP2Q8NFQ8 470 aa15.38■□□□□ 0.05
EXOSC3-203ENST00000465229 OR2M7Q8NG81 312 aa15.38■□□□□ 0.05
EXOSC3-203ENST00000465229 C9orf43Q8TAL5 461 aaPredicted RBP15.38■□□□□ 0.05
EXOSC3-203ENST00000465229 SLC35B4Q969S0 331 aa15.38■□□□□ 0.05
EXOSC3-203ENST00000465229 C12orf43Q96C57 262 aaKnown RBP15.38■□□□□ 0.05
EXOSC3-203ENST00000465229 EXOSC3Q9NQT5 275 aaKnown RBP15.38■□□□□ 0.05
EXOSC3-203ENST00000465229 RASSF1Q9NS23 344 aa15.38■□□□□ 0.05
EXOSC3-203ENST00000465229 MAN2C1Q9NTJ4 1040 aa15.38■□□□□ 0.05
EXOSC3-203ENST00000465229 REV1Q9UBZ9 1251 aa15.38■□□□□ 0.05
EXOSC3-203ENST00000465229 SH3D21A4FU49 640 aa15.37■□□□□ 0.05
EXOSC3-203ENST00000465229 ENO4A6NNW6 628 aa15.37■□□□□ 0.05
EXOSC3-203ENST00000465229 GMFGO60234 142 aa15.37■□□□□ 0.05
EXOSC3-203ENST00000465229 CHMP24386 653 aa15.37■□□□□ 0.05
EXOSC3-203ENST00000465229 MASP1P48740 699 aa15.37■□□□□ 0.05
EXOSC3-203ENST00000465229 RGS8P57771 180 aaPredicted RBP15.37■□□□□ 0.05
EXOSC3-203ENST00000465229 EMX1Q04741 257 aaPredicted RBP15.37■□□□□ 0.05
EXOSC3-203ENST00000465229 PODNL1Q6PEZ8 512 aa15.37■□□□□ 0.05
EXOSC3-203ENST00000465229 Q6ZPB1 254 aaPredicted RBP15.37■□□□□ 0.05
EXOSC3-203ENST00000465229 PLCZ1Q86YW0 608 aa15.37■□□□□ 0.05
EXOSC3-203ENST00000465229 ZNF440Q8IYI8 595 aa15.37■□□□□ 0.05
EXOSC3-203ENST00000465229 FADS6Q8N9I5 356 aa15.37■□□□□ 0.05
EXOSC3-203ENST00000465229 B4GALNT2Q8NHY0 566 aa15.37■□□□□ 0.05
EXOSC3-203ENST00000465229 JSRP1Q96MG2 331 aaPredicted RBP15.37■□□□□ 0.05
EXOSC3-203ENST00000465229 GNRHR2Q96P88 292 aa15.37■□□□□ 0.05
EXOSC3-203ENST00000465229 PRR14Q9BWN1 585 aa15.37■□□□□ 0.05
EXOSC3-203ENST00000465229 MFRPQ9BY79 579 aa15.37■□□□□ 0.05
EXOSC3-203ENST00000465229 POLR2J2Q9GZM3 115 aaKnown RBP15.37■□□□□ 0.05
EXOSC3-203ENST00000465229 POLR2J3Q9H1A7 115 aaKnown RBP15.37■□□□□ 0.05
EXOSC3-203ENST00000465229 DSN1Q9H410 356 aa15.37■□□□□ 0.05
EXOSC3-203ENST00000465229 EVA1AQ9H8M9 152 aa15.37■□□□□ 0.05
EXOSC3-203ENST00000465229 FKBP14Q9NWM8 211 aa15.37■□□□□ 0.05
EXOSC3-203ENST00000465229 IMPAD1Q9NX62 359 aa15.37■□□□□ 0.05
EXOSC3-203ENST00000465229 ZNF226Q9NYT6 803 aa15.37■□□□□ 0.05
EXOSC3-203ENST00000465229 FBXL2Q9UKC9 423 aa15.37■□□□□ 0.05
EXOSC3-203ENST00000465229 HEATR5AQ86XA9 2040 aa15.37■□□□□ 0.05
EXOSC3-203ENST00000465229 PCNX3Q9H6A9 2034 aa15.36■□□□□ 0.05
EXOSC3-203ENST00000465229 LRRC3CA6NJW4 275 aa15.36■□□□□ 0.05
EXOSC3-203ENST00000465229 H3BMQ9 156 aa15.36■□□□□ 0.05
EXOSC3-203ENST00000465229 KLRC4-KLRK1H3BQV0 150 aa15.36■□□□□ 0.05
EXOSC3-203ENST00000465229 NOL3O60936 208 aaKnown RBP15.36■□□□□ 0.05
EXOSC3-203ENST00000465229 POU2F1P14859 743 aa15.36■□□□□ 0.05
EXOSC3-203ENST00000465229 ACVR2AP27037 513 aa15.36■□□□□ 0.05
EXOSC3-203ENST00000465229 MSX1P28360 303 aa15.36■□□□□ 0.05
EXOSC3-203ENST00000465229 PCSK6P29122 969 aa15.36■□□□□ 0.05
EXOSC3-203ENST00000465229 P2RX1P51575 399 aa15.36■□□□□ 0.05
EXOSC3-203ENST00000465229 ZNF169Q14929 603 aaPredicted RBP15.36■□□□□ 0.05
EXOSC3-203ENST00000465229 GPR107Q5VW38 600 aa15.36■□□□□ 0.05
EXOSC3-203ENST00000465229 C1orf94Q6P1W5 598 aa15.36■□□□□ 0.05
EXOSC3-203ENST00000465229 ZNF550Q7Z398 422 aa15.36■□□□□ 0.05
EXOSC3-203ENST00000465229 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.36■□□□□ 0.05
EXOSC3-203ENST00000465229 TMCO5AQ8N6Q1 288 aa15.36■□□□□ 0.05
EXOSC3-203ENST00000465229 OR2M3Q8NG83 312 aa15.36■□□□□ 0.05
EXOSC3-203ENST00000465229 OR1J4Q8NGS1 313 aa15.36■□□□□ 0.05
EXOSC3-203ENST00000465229 OR5W2Q8NH69 310 aa15.36■□□□□ 0.05
EXOSC3-203ENST00000465229 RAB2BQ8WUD1 216 aa15.36■□□□□ 0.05
EXOSC3-203ENST00000465229 FAR1Q8WVX9 515 aa15.36■□□□□ 0.05
EXOSC3-203ENST00000465229 TRUB1Q8WWH5 349 aaKnown RBP15.36■□□□□ 0.05
EXOSC3-203ENST00000465229 SLC39A7Q92504 469 aa15.36■□□□□ 0.05
EXOSC3-203ENST00000465229 UBE2FQ969M7 185 aa15.36■□□□□ 0.05
EXOSC3-203ENST00000465229 ZNF524Q96C55 264 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms