RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 CLEC9AQ6UXN8 241 aa18.15■□□□□ 0.5
PDLIM4-205ENST00000463615 PEX5LQ8IYB4 626 aa18.15■□□□□ 0.5
PDLIM4-205ENST00000463615 ZNF433Q8N7K0 673 aaPredicted RBP18.15■□□□□ 0.5
PDLIM4-205ENST00000463615 ZNF775Q96BV0 537 aaPredicted RBP18.15■□□□□ 0.5
PDLIM4-205ENST00000463615 RMND5AQ9H871 391 aa18.15■□□□□ 0.5
PDLIM4-205ENST00000463615 TPT1P8Q9HAU6 139 aa18.15■□□□□ 0.5
PDLIM4-205ENST00000463615 P2RX2Q9UBL9 471 aa18.15■□□□□ 0.5
PDLIM4-205ENST00000463615 MALT1Q9UDY8 824 aa18.15■□□□□ 0.5
PDLIM4-205ENST00000463615 TMED7Q9Y3B3 224 aa18.15■□□□□ 0.5
PDLIM4-205ENST00000463615 CDHR4A6H8M9 788 aa18.14■□□□□ 0.49
PDLIM4-205ENST00000463615 DPRXA6NFQ7 191 aa18.14■□□□□ 0.49
PDLIM4-205ENST00000463615 OR5H1A6NKK0 313 aa18.14■□□□□ 0.49
PDLIM4-205ENST00000463615 H7C1Q1 480 aa18.14■□□□□ 0.49
PDLIM4-205ENST00000463615 UBDO15205 165 aa18.14■□□□□ 0.49
PDLIM4-205ENST00000463615 LYZL6O75951 148 aa18.14■□□□□ 0.49
PDLIM4-205ENST00000463615 TFPTP0C1Z6 253 aa18.14■□□□□ 0.49
PDLIM4-205ENST00000463615 GGT1P19440 569 aa18.14■□□□□ 0.49
PDLIM4-205ENST00000463615 NTF4P34130 210 aa18.14■□□□□ 0.49
PDLIM4-205ENST00000463615 SLC35A1P78382 337 aa18.14■□□□□ 0.49
PDLIM4-205ENST00000463615 PPA1Q15181 289 aa18.14■□□□□ 0.49
PDLIM4-205ENST00000463615 ZNF672Q499Z4 452 aaPredicted RBP18.14■□□□□ 0.49
PDLIM4-205ENST00000463615 CIARTQ8N365 385 aaPredicted RBP18.14■□□□□ 0.49
PDLIM4-205ENST00000463615 PNPT1Q8TCS8 783 aaKnown RBP18.14■□□□□ 0.49
PDLIM4-205ENST00000463615 FBXW5Q969U6 566 aa18.14■□□□□ 0.49
PDLIM4-205ENST00000463615 APH1AQ96BI3 265 aa18.14■□□□□ 0.49
PDLIM4-205ENST00000463615 DDIT4LQ96D03 193 aa18.14■□□□□ 0.49
PDLIM4-205ENST00000463615 ITCHQ96J02 903 aa18.14■□□□□ 0.49
PDLIM4-205ENST00000463615 OR52B2Q96RD2 323 aa18.14■□□□□ 0.49
PDLIM4-205ENST00000463615 GRIP2Q9C0E4 1043 aa18.14■□□□□ 0.49
PDLIM4-205ENST00000463615 NOSIPQ9Y314 301 aaKnown RBP18.14■□□□□ 0.49
PDLIM4-205ENST00000463615 ABCA2Q9BZC7 2435 aa18.14■□□□□ 0.49
PDLIM4-205ENST00000463615 TMEM72A0PK05 275 aa18.13■□□□□ 0.49
PDLIM4-205ENST00000463615 THBS1P07996 1170 aa18.13■□□□□ 0.49
PDLIM4-205ENST00000463615 IMPDH2P12268 514 aa18.13■□□□□ 0.49
PDLIM4-205ENST00000463615 TACR3P29371 465 aa18.13■□□□□ 0.49
PDLIM4-205ENST00000463615 CRISP3P54108 245 aa18.13■□□□□ 0.49
PDLIM4-205ENST00000463615 RPS4XP62701 263 aaKnown RBP18.13■□□□□ 0.49
PDLIM4-205ENST00000463615 BSPH1Q075Z2 132 aa18.13■□□□□ 0.49
PDLIM4-205ENST00000463615 LIN52Q52LA3 116 aa18.13■□□□□ 0.49
PDLIM4-205ENST00000463615 C1QTNF12Q5T7M4 302 aa18.13■□□□□ 0.49
PDLIM4-205ENST00000463615 RNF220Q5VTB9 566 aa18.13■□□□□ 0.49
PDLIM4-205ENST00000463615 SLC38A5Q8WUX1 472 aa18.13■□□□□ 0.49
PDLIM4-205ENST00000463615 MUCL1Q96DR8 90 aa18.13■□□□□ 0.49
PDLIM4-205ENST00000463615 C7orf26Q96N11 449 aa18.13■□□□□ 0.49
PDLIM4-205ENST00000463615 TRIM2Q9C040 744 aa18.13■□□□□ 0.49
PDLIM4-205ENST00000463615 FN1P02751 2386 aaKnown RBP18.13■□□□□ 0.49
PDLIM4-205ENST00000463615 PDLIM1O00151 329 aa18.12■□□□□ 0.49
PDLIM4-205ENST00000463615 BMP2P12643 396 aa18.12■□□□□ 0.49
PDLIM4-205ENST00000463615 ETFAP13804 333 aa18.12■□□□□ 0.49
PDLIM4-205ENST00000463615 ACAA2P42765 397 aaKnown RBP18.12■□□□□ 0.49
PDLIM4-205ENST00000463615 POLR2JP52435 117 aaKnown RBP18.12■□□□□ 0.49
PDLIM4-205ENST00000463615 OR2B6P58173 313 aa18.12■□□□□ 0.49
PDLIM4-205ENST00000463615 DSTNP60981 165 aa18.12■□□□□ 0.49
PDLIM4-205ENST00000463615 CAPRIN1Q14444 709 aaKnown RBP18.12■□□□□ 0.49
PDLIM4-205ENST00000463615 AGBL2Q5U5Z8 902 aa18.12■□□□□ 0.49
PDLIM4-205ENST00000463615 PRAMEF8Q5VWM4 474 aa18.12■□□□□ 0.49
PDLIM4-205ENST00000463615 PRAMEF7Q5VXH5 474 aa18.12■□□□□ 0.49
PDLIM4-205ENST00000463615 PAQR6Q6TCH4 344 aa18.12■□□□□ 0.49
PDLIM4-205ENST00000463615 EPGNQ6UW88 154 aa18.12■□□□□ 0.49
PDLIM4-205ENST00000463615 ATG4DQ86TL0 474 aaPredicted RBP18.12■□□□□ 0.49
PDLIM4-205ENST00000463615 OR52P1PQ8NH57 321 aa18.12■□□□□ 0.49
PDLIM4-205ENST00000463615 AMBRA1Q9C0C7 1298 aa18.12■□□□□ 0.49
PDLIM4-205ENST00000463615 PIF1Q9H611 641 aa18.12■□□□□ 0.49
PDLIM4-205ENST00000463615 LAMP3Q9UQV4 416 aa18.12■□□□□ 0.49
PDLIM4-205ENST00000463615 TLN2Q9Y4G6 2542 aa18.12■□□□□ 0.49
PDLIM4-205ENST00000463615 CSPG4Q6UVK1 2322 aa18.11■□□□□ 0.49
PDLIM4-205ENST00000463615 A0A0G2JPF8 293 aa18.11■□□□□ 0.49
PDLIM4-205ENST00000463615 FAM234BA2RU67 622 aa18.11■□□□□ 0.49
PDLIM4-205ENST00000463615 TRIM64A6NGJ6 449 aa18.11■□□□□ 0.49
PDLIM4-205ENST00000463615 TRIM64BA6NI03 449 aa18.11■□□□□ 0.49
PDLIM4-205ENST00000463615 HNRNPCL2B2RXH8 293 aa18.11■□□□□ 0.49
PDLIM4-205ENST00000463615 HNRNPCL3B7ZW38 293 aa18.11■□□□□ 0.49
PDLIM4-205ENST00000463615 CLOCKO15516 846 aa18.11■□□□□ 0.49
PDLIM4-205ENST00000463615 HNRNPCL1O60812 293 aaKnown RBP18.11■□□□□ 0.49
PDLIM4-205ENST00000463615 RAMP1O60894 148 aa18.11■□□□□ 0.49
PDLIM4-205ENST00000463615 MRPL33O75394 65 aaKnown RBP18.11■□□□□ 0.49
PDLIM4-205ENST00000463615 TGDSO95455 350 aa18.11■□□□□ 0.49
PDLIM4-205ENST00000463615 LY6G6DO95868 133 aa18.11■□□□□ 0.49
PDLIM4-205ENST00000463615 SOD3P08294 240 aa18.11■□□□□ 0.49
PDLIM4-205ENST00000463615 HNRNPCL4P0DMR1 293 aa18.11■□□□□ 0.49
PDLIM4-205ENST00000463615 HOXB9P17482 250 aaPredicted RBP18.11■□□□□ 0.49
PDLIM4-205ENST00000463615 ATP5J2P56134 94 aa18.11■□□□□ 0.49
PDLIM4-205ENST00000463615 SLC17A1Q14916 467 aa18.11■□□□□ 0.49
PDLIM4-205ENST00000463615 ETFDHQ16134 617 aa18.11■□□□□ 0.49
PDLIM4-205ENST00000463615 ALKBH2Q6NS38 261 aa18.11■□□□□ 0.49
PDLIM4-205ENST00000463615 ZNF836Q6ZNA1 936 aa18.11■□□□□ 0.49
PDLIM4-205ENST00000463615 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.11■□□□□ 0.49
PDLIM4-205ENST00000463615 CCDC103Q8IW40 242 aa18.11■□□□□ 0.49
PDLIM4-205ENST00000463615 MIER2Q8N344 545 aa18.11■□□□□ 0.49
PDLIM4-205ENST00000463615 SMAP2Q8WU79 429 aaPredicted RBP18.11■□□□□ 0.49
PDLIM4-205ENST00000463615 GTF2H4Q92759 462 aa18.11■□□□□ 0.49
PDLIM4-205ENST00000463615 SLC35B4Q969S0 331 aa18.11■□□□□ 0.49
PDLIM4-205ENST00000463615 RADILQ96JH8 1075 aa18.11■□□□□ 0.49
PDLIM4-205ENST00000463615 MUS81Q96NY9 551 aa18.11■□□□□ 0.49
PDLIM4-205ENST00000463615 NAA11Q9BSU3 229 aaPredicted RBP18.11■□□□□ 0.49
PDLIM4-205ENST00000463615 BCL2L10Q9HD36 194 aa18.11■□□□□ 0.49
PDLIM4-205ENST00000463615 RLIMQ9NVW2 624 aa18.11■□□□□ 0.49
PDLIM4-205ENST00000463615 PARPBPQ9NWS1 579 aa18.11■□□□□ 0.49
PDLIM4-205ENST00000463615 ASB6Q9NWX5 421 aa18.11■□□□□ 0.49
PDLIM4-205ENST00000463615 TAS2R16Q9NYV7 291 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms