RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 BTDP43251 543 aa2.24□□□□□ -2.05
HDAC6-212ENST00000461608 MAGEA8P43361 318 aa2.24□□□□□ -2.05
HDAC6-212ENST00000461608 GYG1P46976 350 aa2.24□□□□□ -2.05
HDAC6-212ENST00000461608 HSPA2P54652 639 aa2.24□□□□□ -2.05
HDAC6-212ENST00000461608 OGDHQ02218 1023 aa2.24□□□□□ -2.05
HDAC6-212ENST00000461608 EGFEM1PQ0D2K5 195 aa2.24□□□□□ -2.05
HDAC6-212ENST00000461608 CUL1Q13616 776 aa2.24□□□□□ -2.05
HDAC6-212ENST00000461608 MAJINQ3KP22 176 aa2.24□□□□□ -2.05
HDAC6-212ENST00000461608 TMEM52BQ4KMG9 183 aa2.24□□□□□ -2.05
HDAC6-212ENST00000461608 BOLA3Q53S33 107 aa2.24□□□□□ -2.05
HDAC6-212ENST00000461608 C6orf226Q5I0X4 101 aa2.24□□□□□ -2.05
HDAC6-212ENST00000461608 HSDL2Q6YN16 418 aa2.24□□□□□ -2.05
HDAC6-212ENST00000461608 HSD17B13Q7Z5P4 300 aaPredicted RBP2.24□□□□□ -2.05
HDAC6-212ENST00000461608 TMEM179BQ7Z7N9 219 aa2.24□□□□□ -2.05
HDAC6-212ENST00000461608 ZNF589Q86UQ0 364 aaPredicted RBP2.24□□□□□ -2.05
HDAC6-212ENST00000461608 EGFL6Q8IUX8 553 aa2.24□□□□□ -2.05
HDAC6-212ENST00000461608 CCDC65Q8IXS2 484 aa2.24□□□□□ -2.05
HDAC6-212ENST00000461608 UBE2J2Q8N2K1 259 aa2.24□□□□□ -2.05
HDAC6-212ENST00000461608 OR2L13Q8N349 312 aa2.24□□□□□ -2.05
HDAC6-212ENST00000461608 CD177Q8N6Q3 437 aa2.24□□□□□ -2.05
HDAC6-212ENST00000461608 LINC00612Q8N6U2 182 aa2.24□□□□□ -2.05
HDAC6-212ENST00000461608 C14orf178Q8N769 122 aaPredicted RBP2.24□□□□□ -2.05
HDAC6-212ENST00000461608 BBS1Q8NFJ9 593 aa2.24□□□□□ -2.05
HDAC6-212ENST00000461608 OR2AP1Q8NGE2 309 aa2.24□□□□□ -2.05
HDAC6-212ENST00000461608 MAGEE2Q8TD90 523 aaPredicted RBP2.24□□□□□ -2.05
HDAC6-212ENST00000461608 OR1E3Q8WZA6 343 aa2.24□□□□□ -2.05
HDAC6-212ENST00000461608 RAPGEF5Q92565 580 aa2.24□□□□□ -2.05
HDAC6-212ENST00000461608 UBE2E3Q969T4 207 aa2.24□□□□□ -2.05
HDAC6-212ENST00000461608 NT5C3BQ969T7 300 aa2.24□□□□□ -2.05
HDAC6-212ENST00000461608 TUBGCP3Q96CW5 907 aa2.24□□□□□ -2.05
HDAC6-212ENST00000461608 MAGEB18Q96M61 343 aa2.24□□□□□ -2.05
HDAC6-212ENST00000461608 NOL4LQ96MY1 436 aaPredicted RBP2.24□□□□□ -2.05
HDAC6-212ENST00000461608 ZNF184Q99676 751 aaPredicted RBP2.24□□□□□ -2.05
HDAC6-212ENST00000461608 NICN1Q9BSH3 213 aa2.24□□□□□ -2.05
HDAC6-212ENST00000461608 REEP4Q9H6H4 257 aa2.24□□□□□ -2.05
HDAC6-212ENST00000461608 RANBP3Q9H6Z4 567 aaPredicted RBP2.24□□□□□ -2.05
HDAC6-212ENST00000461608 PTGES2Q9H7Z7 377 aa2.24□□□□□ -2.05
HDAC6-212ENST00000461608 NIPAL2Q9H841 368 aa2.24□□□□□ -2.05
HDAC6-212ENST00000461608 YY1AP1Q9H869 796 aa2.24□□□□□ -2.05
HDAC6-212ENST00000461608 PLGRKTQ9HBL7 147 aa2.24□□□□□ -2.05
HDAC6-212ENST00000461608 NMRK1Q9NWW6 199 aa2.24□□□□□ -2.05
HDAC6-212ENST00000461608 SUN2Q9UH99 717 aa2.24□□□□□ -2.05
HDAC6-212ENST00000461608 CLEC4EQ9ULY5 219 aa2.24□□□□□ -2.05
HDAC6-212ENST00000461608 VSIG4Q9Y279 399 aa2.24□□□□□ -2.05
HDAC6-212ENST00000461608 MEMO1Q9Y316 297 aa2.24□□□□□ -2.05
HDAC6-212ENST00000461608 RRP15Q9Y3B9 282 aaKnown RBP2.24□□□□□ -2.05
HDAC6-212ENST00000461608 NPTNQ9Y639 398 aa2.24□□□□□ -2.05
HDAC6-212ENST00000461608 TNRQ92752 1358 aa2.23□□□□□ -2.05
HDAC6-212ENST00000461608 PPIAL4EA0A075B759 164 aa2.23□□□□□ -2.05
HDAC6-212ENST00000461608 LOC110117498-PIK3R3F6TDL0 507 aa2.23□□□□□ -2.05
HDAC6-212ENST00000461608 RGS16O15492 202 aaPredicted RBP2.23□□□□□ -2.05
HDAC6-212ENST00000461608 WBP4O75554 376 aaKnown RBP2.23□□□□□ -2.05
HDAC6-212ENST00000461608 BBOX1O75936 387 aa2.23□□□□□ -2.05
HDAC6-212ENST00000461608 ATP5LO75964 103 aa2.23□□□□□ -2.05
HDAC6-212ENST00000461608 SNAPINO95295 136 aa2.23□□□□□ -2.05
HDAC6-212ENST00000461608 CCDC166P0CW27 439 aa2.23□□□□□ -2.05
HDAC6-212ENST00000461608 PPIAL4FP0DN26 164 aa2.23□□□□□ -2.05
HDAC6-212ENST00000461608 GABRR1P24046 479 aa2.23□□□□□ -2.05
HDAC6-212ENST00000461608 GNA11P29992 359 aa2.23□□□□□ -2.05
HDAC6-212ENST00000461608 PTGDSP41222 190 aa2.23□□□□□ -2.05
HDAC6-212ENST00000461608 YAP1P46937 504 aaKnown RBP2.23□□□□□ -2.05
HDAC6-212ENST00000461608 NOVP48745 357 aa2.23□□□□□ -2.05
HDAC6-212ENST00000461608 SUCLG1P53597 346 aaKnown RBP2.23□□□□□ -2.05
HDAC6-212ENST00000461608 ATP1B3P54709 279 aa2.23□□□□□ -2.05
HDAC6-212ENST00000461608 SEC61GP60059 68 aa2.23□□□□□ -2.05
HDAC6-212ENST00000461608 IGLV3-21P80748 117 aaPredicted RBP2.23□□□□□ -2.05
HDAC6-212ENST00000461608 GNMTQ14749 295 aa2.23□□□□□ -2.05
HDAC6-212ENST00000461608 KYAT1Q16773 422 aa2.23□□□□□ -2.05
HDAC6-212ENST00000461608 MICBQ29980 383 aa2.23□□□□□ -2.05
HDAC6-212ENST00000461608 PARP15Q460N3 678 aa2.23□□□□□ -2.05
HDAC6-212ENST00000461608 KLF17Q5JT82 389 aaPredicted RBP2.23□□□□□ -2.05
HDAC6-212ENST00000461608 PDZK1Q5T2W1 519 aa2.23□□□□□ -2.05
HDAC6-212ENST00000461608 ATL3Q6DD88 541 aa2.23□□□□□ -2.05
HDAC6-212ENST00000461608 UNQ9370/PRO34162Q6UXP9 181 aa2.23□□□□□ -2.05
HDAC6-212ENST00000461608 ZNF677Q86XU0 584 aa2.23□□□□□ -2.05
HDAC6-212ENST00000461608 VRK2Q86Y07 508 aa2.23□□□□□ -2.05
HDAC6-212ENST00000461608 CEP112Q8N8E3 955 aa2.23□□□□□ -2.05
HDAC6-212ENST00000461608 OR51S1Q8NGJ8 323 aa2.23□□□□□ -2.05
HDAC6-212ENST00000461608 OR56B4Q8NH76 319 aa2.23□□□□□ -2.05
HDAC6-212ENST00000461608 SETD7Q8WTS6 366 aaKnown RBP2.23□□□□□ -2.05
HDAC6-212ENST00000461608 SCFD1Q8WVM8 642 aa2.23□□□□□ -2.05
HDAC6-212ENST00000461608 ST8SIA1Q92185 356 aa2.23□□□□□ -2.05
HDAC6-212ENST00000461608 C10orf35Q96D05 121 aa2.23□□□□□ -2.05
HDAC6-212ENST00000461608 NUS1Q96E22 293 aa2.23□□□□□ -2.05
HDAC6-212ENST00000461608 SLC38A2Q96QD8 506 aa2.23□□□□□ -2.05
HDAC6-212ENST00000461608 MTMR9Q96QG7 549 aa2.23□□□□□ -2.05
HDAC6-212ENST00000461608 GAL3ST1Q99999 423 aa2.23□□□□□ -2.05
HDAC6-212ENST00000461608 KLHDC3Q9BQ90 382 aa2.23□□□□□ -2.05
HDAC6-212ENST00000461608 EBF4Q9BQW3 602 aa2.23□□□□□ -2.05
HDAC6-212ENST00000461608 MAGT1Q9H0U3 335 aa2.23□□□□□ -2.05
HDAC6-212ENST00000461608 RBKSQ9H477 322 aa2.23□□□□□ -2.05
HDAC6-212ENST00000461608 VCPKMTQ9H867 229 aa2.23□□□□□ -2.05
HDAC6-212ENST00000461608 SH2D2AQ9NP31 389 aa2.23□□□□□ -2.05
HDAC6-212ENST00000461608 MARCH5Q9NX47 278 aa2.23□□□□□ -2.05
HDAC6-212ENST00000461608 HYPKQ9NX55 129 aa2.23□□□□□ -2.05
HDAC6-212ENST00000461608 CD274Q9NZQ7 290 aa2.23□□□□□ -2.05
HDAC6-212ENST00000461608 CTNNA3Q9UI47 895 aa2.23□□□□□ -2.05
HDAC6-212ENST00000461608 LCMT1Q9UIC8 334 aa2.23□□□□□ -2.05
HDAC6-212ENST00000461608 IKZF2Q9UKS7 526 aa2.23□□□□□ -2.05
HDAC6-212ENST00000461608 RABL2BQ9UNT1 228 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms