RNA–Protein interactions for RNA: ENST00000460639.2

ATRX-204, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 461 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-204ENST00000460639 CDK20Q8IZL9 346 aa3.92□□□□□ -1.78
ATRX-204ENST00000460639 RNF113BQ8IZP6 322 aaKnown RBP3.92□□□□□ -1.78
ATRX-204ENST00000460639 GPC2Q8N158 579 aa3.92□□□□□ -1.78
ATRX-204ENST00000460639 CSNK1A1LQ8N752 337 aa3.92□□□□□ -1.78
ATRX-204ENST00000460639 C9orf106Q8NAJ2 232 aa3.92□□□□□ -1.78
ATRX-204ENST00000460639 STXBP6Q8NFX7 210 aa3.92□□□□□ -1.78
ATRX-204ENST00000460639 OR7A2PQ8NGA2 310 aa3.92□□□□□ -1.78
ATRX-204ENST00000460639 OR10H4Q8NGA5 316 aa3.92□□□□□ -1.78
ATRX-204ENST00000460639 OR4F6Q8NGB9 312 aa3.92□□□□□ -1.78
ATRX-204ENST00000460639 UBA3Q8TBC4 463 aa3.92□□□□□ -1.78
ATRX-204ENST00000460639 SETD7Q8WTS6 366 aaKnown RBP3.92□□□□□ -1.78
ATRX-204ENST00000460639 RASSF5Q8WWW0 418 aa3.92□□□□□ -1.78
ATRX-204ENST00000460639 NAT6Q93015 286 aa3.92□□□□□ -1.78
ATRX-204ENST00000460639 RTP4Q96DX8 246 aa3.92□□□□□ -1.78
ATRX-204ENST00000460639 TIMD4Q96H15 378 aa3.92□□□□□ -1.78
ATRX-204ENST00000460639 ZNF514Q96K75 400 aaPredicted RBP3.92□□□□□ -1.78
ATRX-204ENST00000460639 LYZL4Q96KX0 146 aa3.92□□□□□ -1.78
ATRX-204ENST00000460639 FOXN4Q96NZ1 517 aa3.92□□□□□ -1.78
ATRX-204ENST00000460639 PSD2Q9BQI7 771 aa3.92□□□□□ -1.78
ATRX-204ENST00000460639 URM1Q9BTM9 101 aaKnown RBP3.92□□□□□ -1.78
ATRX-204ENST00000460639 CHRNA10Q9GZZ6 450 aa3.92□□□□□ -1.78
ATRX-204ENST00000460639 OPN3Q9H1Y3 402 aaPredicted RBP3.92□□□□□ -1.78
ATRX-204ENST00000460639 NRN1Q9NPD7 142 aa3.92□□□□□ -1.78
ATRX-204ENST00000460639 SAMSN1Q9NSI8 373 aaKnown RBP3.92□□□□□ -1.78
ATRX-204ENST00000460639 STMN3Q9NZ72 180 aa3.92□□□□□ -1.78
ATRX-204ENST00000460639 KCNS2Q9ULS6 477 aa3.92□□□□□ -1.78
ATRX-204ENST00000460639 SPATA2Q9UM82 520 aa3.92□□□□□ -1.78
ATRX-204ENST00000460639 FAF1Q9UNN5 650 aaPredicted RBP3.92□□□□□ -1.78
ATRX-204ENST00000460639 AP3M1Q9Y2T2 418 aa3.92□□□□□ -1.78
ATRX-204ENST00000460639 FKBP7Q9Y680 259 aa3.92□□□□□ -1.78
ATRX-204ENST00000460639 PLEKHG1Q9ULL1 1385 aa3.91□□□□□ -1.78
ATRX-204ENST00000460639 IGKV2D-30A0A075B6S6 120 aa3.91□□□□□ -1.78
ATRX-204ENST00000460639 PVALEFA0A1B0GWK0 134 aa3.91□□□□□ -1.78
ATRX-204ENST00000460639 PRSS44E7EML9 344 aa3.91□□□□□ -1.78
ATRX-204ENST00000460639 NPIPA7E9PJI5 369 aa3.91□□□□□ -1.78
ATRX-204ENST00000460639 G3V4G9 280 aa3.91□□□□□ -1.78
ATRX-204ENST00000460639 CALUO43852 315 aaPredicted RBP3.91□□□□□ -1.78
ATRX-204ENST00000460639 CIAO1O76071 339 aa3.91□□□□□ -1.78
ATRX-204ENST00000460639 CLDN9O95484 217 aa3.91□□□□□ -1.78
ATRX-204ENST00000460639 P04436 131 aa3.91□□□□□ -1.78
ATRX-204ENST00000460639 UBCP0CG48 685 aaKnown RBP3.91□□□□□ -1.78
ATRX-204ENST00000460639 NPIPA8P0DM63 369 aa3.91□□□□□ -1.78
ATRX-204ENST00000460639 FGF3P11487 239 aaPredicted RBP3.91□□□□□ -1.78
ATRX-204ENST00000460639 GFAPP14136 432 aa3.91□□□□□ -1.78
ATRX-204ENST00000460639 CD1CP29017 333 aa3.91□□□□□ -1.78
ATRX-204ENST00000460639 IL12BP29460 328 aa3.91□□□□□ -1.78
ATRX-204ENST00000460639 UGT1A3P35503 534 aa3.91□□□□□ -1.78
ATRX-204ENST00000460639 NUDT1P36639 197 aa3.91□□□□□ -1.78
ATRX-204ENST00000460639 SPAM1P38567 509 aa3.91□□□□□ -1.78
ATRX-204ENST00000460639 HSPA9P38646 679 aaKnown RBP3.91□□□□□ -1.78
ATRX-204ENST00000460639 NBL1P41271 181 aa3.91□□□□□ -1.78
ATRX-204ENST00000460639 SLC1A2P43004 574 aa3.91□□□□□ -1.78
ATRX-204ENST00000460639 QARSP47897 775 aaKnown RBP3.91□□□□□ -1.78
ATRX-204ENST00000460639 TNNC1P63316 161 aa3.91□□□□□ -1.78
ATRX-204ENST00000460639 HPCAP84074 193 aa3.91□□□□□ -1.78
ATRX-204ENST00000460639 FCHO2Q0JRZ9 810 aa3.91□□□□□ -1.78
ATRX-204ENST00000460639 FADDQ13158 208 aa3.91□□□□□ -1.78
ATRX-204ENST00000460639 STX3Q13277 289 aa3.91□□□□□ -1.78
ATRX-204ENST00000460639 WRNQ14191 1432 aaPredicted RBP eCLIP3.91□□□□□ -1.78
ATRX-204ENST00000460639 NFATC4Q14934 902 aa3.91□□□□□ -1.78
ATRX-204ENST00000460639 PON2Q15165 354 aa3.91□□□□□ -1.78
ATRX-204ENST00000460639 PSG3Q16557 428 aa3.91□□□□□ -1.78
ATRX-204ENST00000460639 SGCAQ16586 387 aa3.91□□□□□ -1.78
ATRX-204ENST00000460639 MOGAT2Q3SYC2 334 aa3.91□□□□□ -1.78
ATRX-204ENST00000460639 TMEM35AQ53FP2 167 aa3.91□□□□□ -1.78
ATRX-204ENST00000460639 FAM120AOSQ5T036 256 aa3.91□□□□□ -1.78
ATRX-204ENST00000460639 ADNP2Q6IQ32 1131 aa3.91□□□□□ -1.78
ATRX-204ENST00000460639 PRR5LQ6MZQ0 368 aa3.91□□□□□ -1.78
ATRX-204ENST00000460639 APOBEC3HQ6NTF7 200 aaKnown RBP3.91□□□□□ -1.78
ATRX-204ENST00000460639 ENPP6Q6UWR7 440 aa3.91□□□□□ -1.78
ATRX-204ENST00000460639 ASRGL1Q7L266 308 aa3.91□□□□□ -1.78
ATRX-204ENST00000460639 ARCQ7LC44 396 aa3.91□□□□□ -1.78
ATRX-204ENST00000460639 HDDC2Q7Z4H3 204 aa3.91□□□□□ -1.78
ATRX-204ENST00000460639 CYP4Z1Q86W10 505 aa3.91□□□□□ -1.78
ATRX-204ENST00000460639 TGIF2LXQ8IUE1 241 aa3.91□□□□□ -1.78
ATRX-204ENST00000460639 PLD3Q8IV08 490 aa3.91□□□□□ -1.78
ATRX-204ENST00000460639 MMAAQ8IVH4 418 aaKnown RBP3.91□□□□□ -1.78
ATRX-204ENST00000460639 DND1Q8IYX4 353 aaKnown RBP3.91□□□□□ -1.78
ATRX-204ENST00000460639 FBXO36Q8NEA4 188 aa3.91□□□□□ -1.78
ATRX-204ENST00000460639 ADAMTS16Q8TE57 1224 aa3.91□□□□□ -1.78
ATRX-204ENST00000460639 CAPSLQ8WWF8 208 aa3.91□□□□□ -1.78
ATRX-204ENST00000460639 TANKQ92844 425 aa3.91□□□□□ -1.78
ATRX-204ENST00000460639 FAM218AQ96MZ4 157 aa3.91□□□□□ -1.78
ATRX-204ENST00000460639 COMMD4Q9H0A8 199 aa3.91□□□□□ -1.78
ATRX-204ENST00000460639 FAM49AQ9H0Q0 323 aaPredicted RBP3.91□□□□□ -1.78
ATRX-204ENST00000460639 CPVLQ9H3G5 476 aa3.91□□□□□ -1.78
ATRX-204ENST00000460639 SMYD3Q9H7B4 428 aa3.91□□□□□ -1.78
ATRX-204ENST00000460639 CD209Q9NNX6 404 aa3.91□□□□□ -1.78
ATRX-204ENST00000460639 SLC40A1Q9NP59 571 aa3.91□□□□□ -1.78
ATRX-204ENST00000460639 OLFML3Q9NRN5 406 aa3.91□□□□□ -1.78
ATRX-204ENST00000460639 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.91□□□□□ -1.78
ATRX-204ENST00000460639 NPIPA1Q9UND3 350 aa3.91□□□□□ -1.78
ATRX-204ENST00000460639 SCML2Q9UQR0 700 aa3.91□□□□□ -1.78
ATRX-204ENST00000460639 ERGIC3Q9Y282 383 aa3.91□□□□□ -1.78
ATRX-204ENST00000460639 MMP24Q9Y5R2 645 aa3.91□□□□□ -1.78
ATRX-204ENST00000460639 GAPVD1Q14C86 1478 aa3.91□□□□□ -1.78
ATRX-204ENST00000460639 JCADQ9P266 1359 aa3.9□□□□□ -1.78
ATRX-204ENST00000460639 A0A087WZ39 114 aa3.9□□□□□ -1.79
ATRX-204ENST00000460639 A0A0A6YYD4 124 aa3.9□□□□□ -1.79
ATRX-204ENST00000460639 TRBV4-1A0A0J9YWV2 114 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms