RNA–Protein interactions for RNA: ENST00000453954.6

TCF3-204, Transcript of transcription factor 3, humanhuman

TSL 5 BASIC

Gene TCF3, Length 3,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-204ENST00000453954 LHX9Q9NQ69 397 aa15.98■□□□□ 0.15
TCF3-204ENST00000453954 ECDO95905 644 aaPredicted RBP15.98■□□□□ 0.15
TCF3-204ENST00000453954 SULT1A3P0DMM9 295 aa15.98■□□□□ 0.15
TCF3-204ENST00000453954 SULT1A4P0DMN0 295 aa15.98■□□□□ 0.15
TCF3-204ENST00000453954 SRSF5Q13243 272 aaKnown RBP15.98■□□□□ 0.15
TCF3-204ENST00000453954 OR7G2Q8NG99 324 aa15.98■□□□□ 0.15
TCF3-204ENST00000453954 TSEN15Q8WW01 171 aaKnown RBP15.98■□□□□ 0.15
TCF3-204ENST00000453954 RSPH9Q9H1X1 276 aaPredicted RBP15.98■□□□□ 0.15
TCF3-204ENST00000453954 TMEM231Q9H6L2 316 aa15.98■□□□□ 0.15
TCF3-204ENST00000453954 SLC22A23A1A5C7 686 aa15.97■□□□□ 0.15
TCF3-204ENST00000453954 C7orf66A4D0T2 115 aa15.97■□□□□ 0.15
TCF3-204ENST00000453954 LRIT2A6NDA9 550 aa15.97■□□□□ 0.15
TCF3-204ENST00000453954 FAM74A7A6NL05 159 aa15.97■□□□□ 0.15
TCF3-204ENST00000453954 SDC3O75056 442 aa15.97■□□□□ 0.15
TCF3-204ENST00000453954 TBX6O95947 436 aaPredicted RBP15.97■□□□□ 0.15
TCF3-204ENST00000453954 HLA-DQB1P01920 261 aa15.97■□□□□ 0.15
TCF3-204ENST00000453954 CPMP14384 443 aa15.97■□□□□ 0.15
TCF3-204ENST00000453954 VASPP50552 380 aaPredicted RBP15.97■□□□□ 0.15
TCF3-204ENST00000453954 AP3S2P59780 193 aa15.97■□□□□ 0.15
TCF3-204ENST00000453954 FAM74A3Q4VXF1 159 aa15.97■□□□□ 0.15
TCF3-204ENST00000453954 ZNF836Q6ZNA1 936 aa15.97■□□□□ 0.15
TCF3-204ENST00000453954 KCTD9Q7L273 389 aa15.97■□□□□ 0.15
TCF3-204ENST00000453954 SUSD6Q92537 303 aa15.97■□□□□ 0.15
TCF3-204ENST00000453954 ELP4Q96EB1 424 aa15.97■□□□□ 0.15
TCF3-204ENST00000453954 STARD5Q9NSY2 213 aa15.97■□□□□ 0.15
TCF3-204ENST00000453954 CPNE7Q9UBL6 633 aa15.97■□□□□ 0.15
TCF3-204ENST00000453954 H7C2Y5 167 aa15.97■□□□□ 0.15
TCF3-204ENST00000453954 ATP1B1P05026 303 aa15.97■□□□□ 0.15
TCF3-204ENST00000453954 CBR1P16152 277 aa15.97■□□□□ 0.15
TCF3-204ENST00000453954 CD200R1LQ6Q8B3 271 aa15.97■□□□□ 0.15
TCF3-204ENST00000453954 LCTLQ6UWM7 567 aa15.97■□□□□ 0.15
TCF3-204ENST00000453954 FOXRED2Q8IWF2 684 aa15.97■□□□□ 0.15
TCF3-204ENST00000453954 LHFPL5Q8TAF8 219 aa15.97■□□□□ 0.15
TCF3-204ENST00000453954 SETD7Q8WTS6 366 aaKnown RBP15.97■□□□□ 0.15
TCF3-204ENST00000453954 THEM6Q8WUY1 208 aa15.97■□□□□ 0.15
TCF3-204ENST00000453954 OR8D1Q8WZ84 308 aa15.97■□□□□ 0.15
TCF3-204ENST00000453954 ARRDC3Q96B67 414 aa15.97■□□□□ 0.15
TCF3-204ENST00000453954 ASF1BQ9NVP2 202 aa15.97■□□□□ 0.15
TCF3-204ENST00000453954 HPF1Q9NWY4 346 aa15.97■□□□□ 0.15
TCF3-204ENST00000453954 SPHK1Q9NYA1 384 aa15.97■□□□□ 0.15
TCF3-204ENST00000453954 IL20Q9NYY1 176 aa15.97■□□□□ 0.15
TCF3-204ENST00000453954 SCN10AQ9Y5Y9 1956 aa15.97■□□□□ 0.15
TCF3-204ENST00000453954 ELOA3DA6NLF2 546 aaPredicted RBP15.97■□□□□ 0.15
TCF3-204ENST00000453954 ZGLP1P0C6A0 271 aa15.97■□□□□ 0.15
TCF3-204ENST00000453954 CDK2P24941 298 aa15.97■□□□□ 0.15
TCF3-204ENST00000453954 DDX6P26196 483 aaKnown RBP eCLIP15.97■□□□□ 0.155e-6■■■■■ 46.6
TCF3-204ENST00000453954 PGDP52209 483 aa15.97■□□□□ 0.15
TCF3-204ENST00000453954 TDGQ13569 410 aa15.97■□□□□ 0.15
TCF3-204ENST00000453954 GK2Q14410 553 aaPredicted RBP15.97■□□□□ 0.15
TCF3-204ENST00000453954 TMEM44Q2T9K0 475 aa15.97■□□□□ 0.15
TCF3-204ENST00000453954 ELOA3BQ3SY89 546 aa15.97■□□□□ 0.15
TCF3-204ENST00000453954 CLVS2Q5SYC1 327 aa15.97■□□□□ 0.15
TCF3-204ENST00000453954 RAB12Q6IQ22 244 aa15.97■□□□□ 0.15
TCF3-204ENST00000453954 GRASPQ7Z6J2 395 aaPredicted RBP15.97■□□□□ 0.15
TCF3-204ENST00000453954 ELOA3Q8NG57 546 aa15.97■□□□□ 0.15
TCF3-204ENST00000453954 BRIX1Q8TDN6 353 aaKnown RBP15.97■□□□□ 0.15
TCF3-204ENST00000453954 SOSTQ9BQB4 213 aa15.97■□□□□ 0.15
TCF3-204ENST00000453954 C12orf10Q9HB07 376 aa15.97■□□□□ 0.15
TCF3-204ENST00000453954 ICKQ9UPZ9 632 aa15.97■□□□□ 0.15
TCF3-204ENST00000453954 NOP16Q9Y3C1 178 aaKnown RBP15.97■□□□□ 0.15
TCF3-204ENST00000453954 PCDHGA9Q9Y5G4 932 aaKnown RBP15.97■□□□□ 0.15
TCF3-204ENST00000453954 RP1L1Q8IWN7 2480 aaPredicted RBP15.96■□□□□ 0.15
TCF3-204ENST00000453954 C13orf42A0A1B0GVH6 325 aa15.96■□□□□ 0.15
TCF3-204ENST00000453954 TRAPPC13A5PLN9 417 aa15.96■□□□□ 0.15
TCF3-204ENST00000453954 OR2W5A6NFC9 320 aa15.96■□□□□ 0.15
TCF3-204ENST00000453954 CASC3O15234 703 aaKnown RBP15.96■□□□□ 0.15
TCF3-204ENST00000453954 ATG12O94817 140 aa15.96■□□□□ 0.15
TCF3-204ENST00000453954 F3P13726 295 aa15.96■□□□□ 0.15
TCF3-204ENST00000453954 VAMP1P23763 118 aa15.96■□□□□ 0.15
TCF3-204ENST00000453954 DEFB103AP81534 67 aa15.96■□□□□ 0.15
TCF3-204ENST00000453954 UNQ6126/PRO20091Q6UXV3 157 aa15.96■□□□□ 0.15
TCF3-204ENST00000453954 OR11G2Q8NGC1 345 aa15.96■□□□□ 0.15
TCF3-204ENST00000453954 ADAD1Q96M93 576 aaKnown RBP15.96■□□□□ 0.15
TCF3-204ENST00000453954 ACTR6Q9GZN1 396 aa15.96■□□□□ 0.15
TCF3-204ENST00000453954 SLC6A20Q9NP91 592 aa15.96■□□□□ 0.15
TCF3-204ENST00000453954 C4orf47A7E2U8 309 aa15.96■□□□□ 0.15
TCF3-204ENST00000453954 MAN2B1O00754 1011 aa15.96■□□□□ 0.15
TCF3-204ENST00000453954 RBBP9O75884 186 aa15.96■□□□□ 0.15
TCF3-204ENST00000453954 MNDAP41218 407 aa15.96■□□□□ 0.15
TCF3-204ENST00000453954 HLXQ14774 488 aaPredicted RBP15.96■□□□□ 0.15
TCF3-204ENST00000453954 PRRT3Q5FWE3 981 aa15.96■□□□□ 0.15
TCF3-204ENST00000453954 HAGHLQ6PII5 290 aaPredicted RBP15.96■□□□□ 0.15
TCF3-204ENST00000453954 WDR88Q6ZMY6 472 aa15.96■□□□□ 0.15
TCF3-204ENST00000453954 PAQR7Q86WK9 346 aa15.96■□□□□ 0.15
TCF3-204ENST00000453954 LINC01555Q8NAE3 123 aa15.96■□□□□ 0.15
TCF3-204ENST00000453954 NXPE3Q969Y0 559 aa15.96■□□□□ 0.15
TCF3-204ENST00000453954 INSM2Q96T92 566 aaPredicted RBP15.96■□□□□ 0.15
TCF3-204ENST00000453954 LMAN2LQ9H0V9 348 aa15.96■□□□□ 0.15
TCF3-204ENST00000453954 ACSS1Q9NUB1 689 aaPredicted RBP15.96■□□□□ 0.15
TCF3-204ENST00000453954 COMMD9Q9P000 198 aa15.96■□□□□ 0.15
TCF3-204ENST00000453954 LIPT1Q9Y234 373 aa15.96■□□□□ 0.15
TCF3-204ENST00000453954 LOC285556D6RIA3 1793 aa15.96■□□□□ 0.15
TCF3-204ENST00000453954 SERTM1A2A2V5 107 aa15.96■□□□□ 0.14
TCF3-204ENST00000453954 M0QYG6 137 aa15.96■□□□□ 0.14
TCF3-204ENST00000453954 AGPAT2O15120 278 aa15.96■□□□□ 0.14
TCF3-204ENST00000453954 THY1P04216 161 aa15.96■□□□□ 0.14
TCF3-204ENST00000453954 ZNF888P0CJ79 500 aaPredicted RBP15.96■□□□□ 0.14
TCF3-204ENST00000453954 SEC61A1P61619 476 aaKnown RBP15.96■□□□□ 0.14
TCF3-204ENST00000453954 RPS15P62841 145 aaKnown RBP15.96■□□□□ 0.14
TCF3-204ENST00000453954 GAS6Q14393 721 aa15.96■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms