RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 MAP2K6P52564 334 aa11.41□□□□□ -0.58
CHD3-206ENST00000452447 CRISP3P54108 245 aa11.41□□□□□ -0.58
CHD3-206ENST00000452447 DSTNP60981 165 aa11.41□□□□□ -0.58
CHD3-206ENST00000452447 PLAURQ03405 335 aa11.41□□□□□ -0.58
CHD3-206ENST00000452447 NCMAPQ5T1S8 102 aa11.41□□□□□ -0.58
CHD3-206ENST00000452447 SSX8Q7RTT4 187 aa11.41□□□□□ -0.58
CHD3-206ENST00000452447 ZNF440Q8IYI8 595 aa11.41□□□□□ -0.58
CHD3-206ENST00000452447 OR52P1PQ8NH57 321 aa11.41□□□□□ -0.58
CHD3-206ENST00000452447 APH1AQ96BI3 265 aa11.41□□□□□ -0.58
CHD3-206ENST00000452447 POM121Q96HA1 1249 aa11.41□□□□□ -0.58
CHD3-206ENST00000452447 SMR3AQ99954 134 aa11.41□□□□□ -0.58
CHD3-206ENST00000452447 BDH2Q9BUT1 245 aa11.41□□□□□ -0.58
CHD3-206ENST00000452447 TPT1P8Q9HAU6 139 aa11.41□□□□□ -0.58
CHD3-206ENST00000452447 CACYBPQ9HB71 228 aaKnown RBP11.41□□□□□ -0.58
CHD3-206ENST00000452447 SLC6A13Q9NSD5 602 aa11.41□□□□□ -0.58
CHD3-206ENST00000452447 RLIMQ9NVW2 624 aa11.41□□□□□ -0.58
CHD3-206ENST00000452447 OSGIN1Q9UJX0 560 aa11.41□□□□□ -0.58
CHD3-206ENST00000452447 TRAPPC4Q9Y296 219 aa11.41□□□□□ -0.58
CHD3-206ENST00000452447 TMED7Q9Y3B3 224 aa11.41□□□□□ -0.58
CHD3-206ENST00000452447 JMJD1CQ15652 2540 aa11.4□□□□□ -0.58
CHD3-206ENST00000452447 FAAHO00519 579 aa11.4□□□□□ -0.58
CHD3-206ENST00000452447 ZNF208O43345 1280 aa11.4□□□□□ -0.58
CHD3-206ENST00000452447 EIF1BO60739 113 aaKnown RBP11.4□□□□□ -0.58
CHD3-206ENST00000452447 TMCC2O75069 709 aa11.4□□□□□ -0.58
CHD3-206ENST00000452447 MRPL33O75394 65 aaKnown RBP11.4□□□□□ -0.58
CHD3-206ENST00000452447 IGHV3-9P01782 118 aa11.4□□□□□ -0.58
CHD3-206ENST00000452447 BCHEP06276 602 aa11.4□□□□□ -0.58
CHD3-206ENST00000452447 ETFAP13804 333 aa11.4□□□□□ -0.58
CHD3-206ENST00000452447 IGHV1-2P23083 117 aa11.4□□□□□ -0.58
CHD3-206ENST00000452447 EDNRAP25101 427 aa11.4□□□□□ -0.58
CHD3-206ENST00000452447 STX1BP61266 288 aa11.4□□□□□ -0.58
CHD3-206ENST00000452447 COPZ1P61923 177 aa11.4□□□□□ -0.58
CHD3-206ENST00000452447 SLC35A1P78382 337 aa11.4□□□□□ -0.58
CHD3-206ENST00000452447 EPS8Q12929 822 aa11.4□□□□□ -0.58
CHD3-206ENST00000452447 LARS2Q15031 903 aaKnown RBP11.4□□□□□ -0.58
CHD3-206ENST00000452447 PPA1Q15181 289 aa11.4□□□□□ -0.58
CHD3-206ENST00000452447 LIN52Q52LA3 116 aa11.4□□□□□ -0.58
CHD3-206ENST00000452447 FBXW9Q5XUX1 488 aa11.4□□□□□ -0.58
CHD3-206ENST00000452447 ADAM5Q6NVV9 412 aa11.4□□□□□ -0.58
CHD3-206ENST00000452447 CLEC9AQ6UXN8 241 aa11.4□□□□□ -0.58
CHD3-206ENST00000452447 Q71RC1 249 aaPredicted RBP11.4□□□□□ -0.58
CHD3-206ENST00000452447 P2RY8Q86VZ1 359 aa11.4□□□□□ -0.58
CHD3-206ENST00000452447 CCDC103Q8IW40 242 aa11.4□□□□□ -0.58
CHD3-206ENST00000452447 OR9I1Q8NGQ6 314 aa11.4□□□□□ -0.58
CHD3-206ENST00000452447 FBXW5Q969U6 566 aa11.4□□□□□ -0.58
CHD3-206ENST00000452447 VPS33AQ96AX1 596 aa11.4□□□□□ -0.58
CHD3-206ENST00000452447 NAA11Q9BSU3 229 aaPredicted RBP11.4□□□□□ -0.58
CHD3-206ENST00000452447 ASB6Q9NWX5 421 aa11.4□□□□□ -0.58
CHD3-206ENST00000452447 THUMPD1Q9NXG2 353 aaKnown RBP11.4□□□□□ -0.58
CHD3-206ENST00000452447 ZNF232Q9UNY5 417 aa11.4□□□□□ -0.58
CHD3-206ENST00000452447 LAMP3Q9UQV4 416 aa11.4□□□□□ -0.58
CHD3-206ENST00000452447 USH1CQ9Y6N9 552 aa11.4□□□□□ -0.58
CHD3-206ENST00000452447 CIB4A0PJX0 185 aa11.39□□□□□ -0.59
CHD3-206ENST00000452447 TMEM72A0PK05 275 aa11.39□□□□□ -0.59
CHD3-206ENST00000452447 FAM234BA2RU67 622 aa11.39□□□□□ -0.59
CHD3-206ENST00000452447 CDHR4A6H8M9 788 aa11.39□□□□□ -0.59
CHD3-206ENST00000452447 ZNF716A6NP11 495 aa11.39□□□□□ -0.59
CHD3-206ENST00000452447 POLR3GO15318 223 aaPredicted RBP11.39□□□□□ -0.59
CHD3-206ENST00000452447 COX5AP20674 150 aa11.39□□□□□ -0.59
CHD3-206ENST00000452447 CXCR1P25024 350 aa11.39□□□□□ -0.59
CHD3-206ENST00000452447 MVDP53602 400 aa11.39□□□□□ -0.59
CHD3-206ENST00000452447 SLC16A1P53985 500 aa11.39□□□□□ -0.59
CHD3-206ENST00000452447 ATP5J2P56134 94 aa11.39□□□□□ -0.59
CHD3-206ENST00000452447 RPS4XP62701 263 aaKnown RBP11.39□□□□□ -0.59
CHD3-206ENST00000452447 BSPH1Q075Z2 132 aa11.39□□□□□ -0.59
CHD3-206ENST00000452447 TIMM23BQ5SRD1 257 aa11.39□□□□□ -0.59
CHD3-206ENST00000452447 AGBL2Q5U5Z8 902 aa11.39□□□□□ -0.59
CHD3-206ENST00000452447 EPGNQ6UW88 154 aa11.39□□□□□ -0.59
CHD3-206ENST00000452447 VRK2Q86Y07 508 aa11.39□□□□□ -0.59
CHD3-206ENST00000452447 SLC38A5Q8WUX1 472 aa11.39□□□□□ -0.59
CHD3-206ENST00000452447 AURKBQ96GD4 344 aaPredicted RBP11.39□□□□□ -0.59
CHD3-206ENST00000452447 ARMC7Q9H6L4 198 aa11.39□□□□□ -0.59
CHD3-206ENST00000452447 TCF7L2Q9NQB0 619 aa11.39□□□□□ -0.59
CHD3-206ENST00000452447 CCT8L1PA6NM43 557 aa11.38□□□□□ -0.59
CHD3-206ENST00000452447 H7C1Q1 480 aa11.38□□□□□ -0.59
CHD3-206ENST00000452447 RAD51DO75771 328 aa11.38□□□□□ -0.59
CHD3-206ENST00000452447 TFPTP0C1Z6 253 aa11.38□□□□□ -0.59
CHD3-206ENST00000452447 GKN3PP0CG01 181 aa11.38□□□□□ -0.59
CHD3-206ENST00000452447 PAX1P15863 534 aa11.38□□□□□ -0.59
CHD3-206ENST00000452447 H3F3AP84243 136 aa11.38□□□□□ -0.59
CHD3-206ENST00000452447 LTBQ06643 244 aa11.38□□□□□ -0.59
CHD3-206ENST00000452447 ZSWIM7Q19AV6 140 aa11.38□□□□□ -0.59
CHD3-206ENST00000452447 KRTAP21-3Q3LHN1 58 aa11.38□□□□□ -0.59
CHD3-206ENST00000452447 GTDC1Q4AE62 458 aa11.38□□□□□ -0.59
CHD3-206ENST00000452447 HSP90B2PQ58FF3 399 aa11.38□□□□□ -0.59
CHD3-206ENST00000452447 ZNF836Q6ZNA1 936 aa11.38□□□□□ -0.59
CHD3-206ENST00000452447 ATG4DQ86TL0 474 aaPredicted RBP11.38□□□□□ -0.59
CHD3-206ENST00000452447 CADM2Q8N3J6 435 aa11.38□□□□□ -0.59
CHD3-206ENST00000452447 ZNF433Q8N7K0 673 aaPredicted RBP11.38□□□□□ -0.59
CHD3-206ENST00000452447 LRRC8CQ8TDW0 803 aa11.38□□□□□ -0.59
CHD3-206ENST00000452447 IGFBPL1Q8WX77 278 aa11.38□□□□□ -0.59
CHD3-206ENST00000452447 TMEM19Q96HH6 336 aa11.38□□□□□ -0.59
CHD3-206ENST00000452447 COX4I2Q96KJ9 171 aa11.38□□□□□ -0.59
CHD3-206ENST00000452447 C7orf26Q96N11 449 aa11.38□□□□□ -0.59
CHD3-206ENST00000452447 ADAM19Q9H013 955 aa11.38□□□□□ -0.59
CHD3-206ENST00000452447 RAD21L1Q9H4I0 556 aa11.38□□□□□ -0.59
CHD3-206ENST00000452447 ZNF701Q9NV72 531 aaPredicted RBP11.38□□□□□ -0.59
CHD3-206ENST00000452447 PARPBPQ9NWS1 579 aa11.38□□□□□ -0.59
CHD3-206ENST00000452447 DSPPQ9NZW4 1301 aa11.38□□□□□ -0.59
CHD3-206ENST00000452447 A0A0G2JPF8 293 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms