RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 OR4F3Q6IEY1 312 aa9.57□□□□□ -0.88
USP1-204ENST00000452143 EMBQ6PCB8 327 aa9.57□□□□□ -0.88
USP1-204ENST00000452143 VPS37AQ8NEZ2 397 aa9.57□□□□□ -0.88
USP1-204ENST00000452143 OR4A15Q8NGL6 344 aa9.57□□□□□ -0.88
USP1-204ENST00000452143 ARL5BQ96KC2 179 aa9.57□□□□□ -0.88
USP1-204ENST00000452143 FKRPQ9H9S5 495 aa9.57□□□□□ -0.88
USP1-204ENST00000452143 CTPS2Q9NRF8 586 aa9.57□□□□□ -0.88
USP1-204ENST00000452143 PARPBPQ9NWS1 579 aa9.57□□□□□ -0.88
USP1-204ENST00000452143 TMEM181Q9P2C4 612 aa9.57□□□□□ -0.88
USP1-204ENST00000452143 DCTN4Q9UJW0 460 aa9.57□□□□□ -0.88
USP1-204ENST00000452143 TRAPPC4Q9Y296 219 aa9.57□□□□□ -0.88
USP1-204ENST00000452143 SLC9A8Q9Y2E8 581 aa9.57□□□□□ -0.88
USP1-204ENST00000452143 AMDHD2Q9Y303 409 aa9.57□□□□□ -0.88
USP1-204ENST00000452143 MALRD1Q5VYJ5 2156 aa9.57□□□□□ -0.88
USP1-204ENST00000452143 TLDC2A0PJX2 215 aa9.56□□□□□ -0.88
USP1-204ENST00000452143 M0R1B8 84 aa9.56□□□□□ -0.88
USP1-204ENST00000452143 PDLIM1O00151 329 aa9.56□□□□□ -0.88
USP1-204ENST00000452143 GPRIN2O60269 458 aa9.56□□□□□ -0.88
USP1-204ENST00000452143 SNUPNO95149 360 aaKnown RBP9.56□□□□□ -0.88
USP1-204ENST00000452143 BPGMP07738 259 aa9.56□□□□□ -0.88
USP1-204ENST00000452143 ITGA5P08648 1049 aa9.56□□□□□ -0.88
USP1-204ENST00000452143 UQCRC2P22695 453 aa9.56□□□□□ -0.88
USP1-204ENST00000452143 FABP6P51161 128 aa9.56□□□□□ -0.88
USP1-204ENST00000452143 CASP9P55211 416 aa9.56□□□□□ -0.88
USP1-204ENST00000452143 CHRNEQ04844 493 aa9.56□□□□□ -0.88
USP1-204ENST00000452143 CHRNB3Q05901 458 aa9.56□□□□□ -0.88
USP1-204ENST00000452143 ANXA8L1Q5VT79 327 aa9.56□□□□□ -0.88
USP1-204ENST00000452143 SAXO2Q658L1 398 aa9.56□□□□□ -0.88
USP1-204ENST00000452143 CASP12Q6UXS9 341 aa9.56□□□□□ -0.88
USP1-204ENST00000452143 B3GLCTQ6Y288 498 aa9.56□□□□□ -0.88
USP1-204ENST00000452143 FRRS1Q6ZNA5 592 aa9.56□□□□□ -0.88
USP1-204ENST00000452143 CMIPQ8IY22 773 aa9.56□□□□□ -0.88
USP1-204ENST00000452143 LRRC34Q8IZ02 419 aa9.56□□□□□ -0.88
USP1-204ENST00000452143 CLEC4FQ8N1N0 589 aa9.56□□□□□ -0.88
USP1-204ENST00000452143 ARFGAP2Q8N6H7 521 aa9.56□□□□□ -0.88
USP1-204ENST00000452143 ZNF525Q8N782 197 aa9.56□□□□□ -0.88
USP1-204ENST00000452143 FAM168AQ92567 244 aa9.56□□□□□ -0.88
USP1-204ENST00000452143 PROX1Q92786 737 aa9.56□□□□□ -0.88
USP1-204ENST00000452143 TESCQ96BS2 214 aa9.56□□□□□ -0.88
USP1-204ENST00000452143 ROPN1LQ96C74 230 aa9.56□□□□□ -0.88
USP1-204ENST00000452143 DDIT4LQ96D03 193 aa9.56□□□□□ -0.88
USP1-204ENST00000452143 NEURL3Q96EH8 262 aa9.56□□□□□ -0.88
USP1-204ENST00000452143 OR11A1Q9GZK7 315 aa9.56□□□□□ -0.88
USP1-204ENST00000452143 PRSS51A0A1B0GVH4 220 aa9.55□□□□□ -0.88
USP1-204ENST00000452143 FAAHO00519 579 aa9.55□□□□□ -0.88
USP1-204ENST00000452143 PHF1O43189 567 aaPredicted RBP9.55□□□□□ -0.88
USP1-204ENST00000452143 ZNF208O43345 1280 aa9.55□□□□□ -0.88
USP1-204ENST00000452143 SCN2BO60939 215 aa9.55□□□□□ -0.88
USP1-204ENST00000452143 BCAS1O75363 584 aaPredicted RBP9.55□□□□□ -0.88
USP1-204ENST00000452143 SPAG7O75391 227 aa9.55□□□□□ -0.88
USP1-204ENST00000452143 F12P00748 615 aaPredicted RBP9.55□□□□□ -0.88
USP1-204ENST00000452143 OR12D1P0DN82 309 aa9.55□□□□□ -0.88
USP1-204ENST00000452143 UQCRBP14927 111 aa9.55□□□□□ -0.88
USP1-204ENST00000452143 PTNP21246 168 aa9.55□□□□□ -0.88
USP1-204ENST00000452143 NTF4P34130 210 aa9.55□□□□□ -0.88
USP1-204ENST00000452143 RYKP34925 604 aa9.55□□□□□ -0.88
USP1-204ENST00000452143 THBS2P35442 1172 aa9.55□□□□□ -0.88
USP1-204ENST00000452143 ETV4P43268 484 aa9.55□□□□□ -0.88
USP1-204ENST00000452143 EFNA4P52798 201 aa9.55□□□□□ -0.88
USP1-204ENST00000452143 SLC35A1P78382 337 aa9.55□□□□□ -0.88
USP1-204ENST00000452143 KCNJ10P78508 379 aa9.55□□□□□ -0.88
USP1-204ENST00000452143 TXNL4AP83876 142 aaKnown RBP9.55□□□□□ -0.88
USP1-204ENST00000452143 PLAURQ03405 335 aa9.55□□□□□ -0.88
USP1-204ENST00000452143 IFFO1Q0D2I5 559 aa9.55□□□□□ -0.88
USP1-204ENST00000452143 FUT5Q11128 374 aa9.55□□□□□ -0.88
USP1-204ENST00000452143 TNFAIP8L2Q6P589 184 aaPredicted RBP9.55□□□□□ -0.88
USP1-204ENST00000452143 OLIG3Q7RTU3 272 aa9.55□□□□□ -0.88
USP1-204ENST00000452143 ADGRG3Q86Y34 549 aa9.55□□□□□ -0.88
USP1-204ENST00000452143 KIRREL3Q8IZU9 778 aa9.55□□□□□ -0.88
USP1-204ENST00000452143 C10orf105Q8TEF2 133 aa9.55□□□□□ -0.88
USP1-204ENST00000452143 XAGE5Q8WWM1 108 aa9.55□□□□□ -0.88
USP1-204ENST00000452143 NANOS1Q8WY41 292 aaKnown RBP9.55□□□□□ -0.88
USP1-204ENST00000452143 PMM1Q92871 262 aa9.55□□□□□ -0.88
USP1-204ENST00000452143 NAA11Q9BSU3 229 aaPredicted RBP9.55□□□□□ -0.88
USP1-204ENST00000452143 ROPN1BQ9BZX4 212 aaPredicted RBP9.55□□□□□ -0.88
USP1-204ENST00000452143 DPY30Q9C005 99 aa9.55□□□□□ -0.88
USP1-204ENST00000452143 MANSC1Q9H8J5 431 aa9.55□□□□□ -0.88
USP1-204ENST00000452143 ROPN1Q9HAT0 212 aaPredicted RBP9.55□□□□□ -0.88
USP1-204ENST00000452143 SLC17A5Q9NRA2 495 aa9.55□□□□□ -0.88
USP1-204ENST00000452143 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.55□□□□□ -0.88
USP1-204ENST00000452143 FLVCR1Q9Y5Y0 555 aa9.55□□□□□ -0.88
USP1-204ENST00000452143 PMF1-BGLAPU3KQ54 211 aa9.55□□□□□ -0.88
USP1-204ENST00000452143 A0A1W2PR80 420 aa9.54□□□□□ -0.88
USP1-204ENST00000452143 NDUFS8O00217 210 aa9.54□□□□□ -0.88
USP1-204ENST00000452143 TYROBPO43914 113 aa9.54□□□□□ -0.88
USP1-204ENST00000452143 WNT11O96014 354 aa9.54□□□□□ -0.88
USP1-204ENST00000452143 MYZAPP0CAP1 466 aa9.54□□□□□ -0.88
USP1-204ENST00000452143 PAX7P23759 505 aa9.54□□□□□ -0.88
USP1-204ENST00000452143 MPGP29372 298 aa9.54□□□□□ -0.88
USP1-204ENST00000452143 APOBEC3AP31941 199 aaPredicted RBP9.54□□□□□ -0.88
USP1-204ENST00000452143 IDH2P48735 452 aaKnown RBP9.54□□□□□ -0.88
USP1-204ENST00000452143 ANXA11P50995 505 aaKnown RBP9.54□□□□□ -0.88
USP1-204ENST00000452143 POLR2HP52434 150 aaKnown RBP9.54□□□□□ -0.88
USP1-204ENST00000452143 CLNS1AP54105 237 aaKnown RBP9.54□□□□□ -0.88
USP1-204ENST00000452143 OR2B6P58173 313 aa9.54□□□□□ -0.88
USP1-204ENST00000452143 PHC1P78364 1004 aa9.54□□□□□ -0.88
USP1-204ENST00000452143 GNA13Q14344 377 aa9.54□□□□□ -0.88
USP1-204ENST00000452143 CASP8Q14790 479 aa9.54□□□□□ -0.88
USP1-204ENST00000452143 SLC17A1Q14916 467 aa9.54□□□□□ -0.88
USP1-204ENST00000452143 PDCD2Q16342 344 aaPredicted RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms