RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 CD8BP10966 210 aa12.32□□□□□ -0.44
PDLIM2-213ENST00000448520 POU2F1P14859 743 aa12.32□□□□□ -0.44
PDLIM2-213ENST00000448520 ETS2P15036 469 aa12.32□□□□□ -0.44
PDLIM2-213ENST00000448520 NQO1P15559 274 aaKnown RBP12.32□□□□□ -0.44
PDLIM2-213ENST00000448520 TNFRSF1BP20333 461 aa12.32□□□□□ -0.44
PDLIM2-213ENST00000448520 CD247P20963 164 aa12.32□□□□□ -0.44
PDLIM2-213ENST00000448520 TBXA2RP21731 343 aa12.32□□□□□ -0.44
PDLIM2-213ENST00000448520 KDELR2P33947 212 aa12.32□□□□□ -0.44
PDLIM2-213ENST00000448520 UGT2B10P36537 528 aa12.32□□□□□ -0.44
PDLIM2-213ENST00000448520 RPS3AP61247 264 aaKnown RBP12.32□□□□□ -0.44
PDLIM2-213ENST00000448520 BNIP2Q12982 314 aa12.32□□□□□ -0.44
PDLIM2-213ENST00000448520 TRIM25Q14258 630 aaKnown RBP12.32□□□□□ -0.44
PDLIM2-213ENST00000448520 GNA13Q14344 377 aa12.32□□□□□ -0.44
PDLIM2-213ENST00000448520 ACKR1Q16570 336 aa12.32□□□□□ -0.44
PDLIM2-213ENST00000448520 SPATS1Q496A3 300 aa12.32□□□□□ -0.44
PDLIM2-213ENST00000448520 KLHL26Q53HC5 615 aa12.32□□□□□ -0.44
PDLIM2-213ENST00000448520 CYBRD1Q53TN4 286 aa12.32□□□□□ -0.44
PDLIM2-213ENST00000448520 PRAMEF8Q5VWM4 474 aa12.32□□□□□ -0.44
PDLIM2-213ENST00000448520 PRAMEF7Q5VXH5 474 aa12.32□□□□□ -0.44
PDLIM2-213ENST00000448520 RAET1LQ5VY80 246 aa12.32□□□□□ -0.44
PDLIM2-213ENST00000448520 VWA1Q6PCB0 445 aa12.32□□□□□ -0.44
PDLIM2-213ENST00000448520 ZNF474Q6S9Z5 364 aaPredicted RBP12.32□□□□□ -0.44
PDLIM2-213ENST00000448520 CCDC80Q76M96 950 aa12.32□□□□□ -0.44
PDLIM2-213ENST00000448520 SLC30A8Q8IWU4 369 aa12.32□□□□□ -0.44
PDLIM2-213ENST00000448520 UBQLNLQ8IYU4 475 aa12.32□□□□□ -0.44
PDLIM2-213ENST00000448520 CLIP4Q8N3C7 705 aa12.32□□□□□ -0.44
PDLIM2-213ENST00000448520 DUSP19Q8WTR2 217 aa12.32□□□□□ -0.44
PDLIM2-213ENST00000448520 WDR60Q8WVS4 1066 aa12.32□□□□□ -0.44
PDLIM2-213ENST00000448520 ZNF845Q96IR2 970 aaPredicted RBP12.32□□□□□ -0.44
PDLIM2-213ENST00000448520 SMR3AQ99954 134 aa12.32□□□□□ -0.44
PDLIM2-213ENST00000448520 WFDC6Q9BQY6 131 aa12.32□□□□□ -0.44
PDLIM2-213ENST00000448520 BDH2Q9BUT1 245 aa12.32□□□□□ -0.44
PDLIM2-213ENST00000448520 MTHFD2LQ9H903 347 aaPredicted RBP12.32□□□□□ -0.44
PDLIM2-213ENST00000448520 RNF122Q9H9V4 155 aa12.32□□□□□ -0.44
PDLIM2-213ENST00000448520 UBQLN4Q9NRR5 601 aa12.32□□□□□ -0.44
PDLIM2-213ENST00000448520 RLIMQ9NVW2 624 aa12.32□□□□□ -0.44
PDLIM2-213ENST00000448520 KLHL28Q9NXS3 571 aa12.32□□□□□ -0.44
PDLIM2-213ENST00000448520 MED11Q9P086 117 aa12.32□□□□□ -0.44
PDLIM2-213ENST00000448520 C6orf203Q9P0P8 240 aaPredicted RBP12.32□□□□□ -0.44
PDLIM2-213ENST00000448520 MAGEL2Q9UJ55 1249 aa12.32□□□□□ -0.44
PDLIM2-213ENST00000448520 ZNF337Q9Y3M9 751 aa12.32□□□□□ -0.44
PDLIM2-213ENST00000448520 SERINC4A6NH21 518 aa12.31□□□□□ -0.44
PDLIM2-213ENST00000448520 DEFB108AA8MXU0 73 aa12.31□□□□□ -0.44
PDLIM2-213ENST00000448520 FRS3O43559 492 aa12.31□□□□□ -0.44
PDLIM2-213ENST00000448520 ZNF682O95780 498 aa12.31□□□□□ -0.44
PDLIM2-213ENST00000448520 CGAP01215 116 aa12.31□□□□□ -0.44
PDLIM2-213ENST00000448520 HEXAP06865 529 aa12.31□□□□□ -0.44
PDLIM2-213ENST00000448520 PABPC4LP0CB38 370 aaKnown RBP12.31□□□□□ -0.44
PDLIM2-213ENST00000448520 TCEA1P23193 301 aaKnown RBP12.31□□□□□ -0.44
PDLIM2-213ENST00000448520 KCNJ5P48544 419 aa12.31□□□□□ -0.44
PDLIM2-213ENST00000448520 SUCLG1P53597 346 aaKnown RBP12.31□□□□□ -0.44
PDLIM2-213ENST00000448520 CLDN15P56746 228 aa12.31□□□□□ -0.44
PDLIM2-213ENST00000448520 C17orf67Q0P5P2 114 aa12.31□□□□□ -0.44
PDLIM2-213ENST00000448520 DUSP7Q16829 419 aa12.31□□□□□ -0.44
PDLIM2-213ENST00000448520 ZNF311Q5JNZ3 666 aa12.31□□□□□ -0.44
PDLIM2-213ENST00000448520 MRPL2Q5T653 305 aaKnown RBP12.31□□□□□ -0.44
PDLIM2-213ENST00000448520 INTS11Q5TA45 600 aaKnown RBP12.31□□□□□ -0.44
PDLIM2-213ENST00000448520 C20orf204Q6ZNR8 217 aa12.31□□□□□ -0.44
PDLIM2-213ENST00000448520 PATL1Q86TB9 770 aaKnown RBP12.31□□□□□ -0.44
PDLIM2-213ENST00000448520 DHFR2Q86XF0 187 aa12.31□□□□□ -0.44
PDLIM2-213ENST00000448520 ARMC8Q8IUR7 673 aa12.31□□□□□ -0.44
PDLIM2-213ENST00000448520 PEX5LQ8IYB4 626 aa12.31□□□□□ -0.44
PDLIM2-213ENST00000448520 BHLHE22Q8NFJ8 381 aaPredicted RBP12.31□□□□□ -0.44
PDLIM2-213ENST00000448520 CNOT9Q92600 299 aaKnown RBP12.31□□□□□ -0.44
PDLIM2-213ENST00000448520 ASB9Q96DX5 294 aa12.31□□□□□ -0.44
PDLIM2-213ENST00000448520 TPD52L3Q96J77 140 aa12.31□□□□□ -0.44
PDLIM2-213ENST00000448520 NSMCE2Q96MF7 247 aa12.31□□□□□ -0.44
PDLIM2-213ENST00000448520 PINK1Q9BXM7 581 aa12.31□□□□□ -0.44
PDLIM2-213ENST00000448520 TBL1XR1Q9BZK7 514 aa12.31□□□□□ -0.44
PDLIM2-213ENST00000448520 DTNAQ9Y4J8 743 aa12.31□□□□□ -0.44
PDLIM2-213ENST00000448520 AP4B1Q9Y6B7 739 aa12.31□□□□□ -0.44
PDLIM2-213ENST00000448520 JMJD1CQ15652 2540 aa12.31□□□□□ -0.44
PDLIM2-213ENST00000448520 TCRBV5S2A0A599 114 aa12.3□□□□□ -0.44
PDLIM2-213ENST00000448520 OR2M5A3KFT3 312 aa12.3□□□□□ -0.44
PDLIM2-213ENST00000448520 ALG1L2C9J202 215 aa12.3□□□□□ -0.44
PDLIM2-213ENST00000448520 SCDO00767 359 aa12.3□□□□□ -0.44
PDLIM2-213ENST00000448520 ANGPTL1O95841 491 aa12.3□□□□□ -0.44
PDLIM2-213ENST00000448520 DBIP07108 87 aaKnown RBP12.3□□□□□ -0.44
PDLIM2-213ENST00000448520 NGFRP08138 427 aa12.3□□□□□ -0.44
PDLIM2-213ENST00000448520 GUSBP08236 651 aa12.3□□□□□ -0.44
PDLIM2-213ENST00000448520 FCGR2AP12318 317 aa12.3□□□□□ -0.44
PDLIM2-213ENST00000448520 HPGDP15428 266 aa12.3□□□□□ -0.44
PDLIM2-213ENST00000448520 IL7RP16871 459 aa12.3□□□□□ -0.44
PDLIM2-213ENST00000448520 SGCBQ16585 318 aa12.3□□□□□ -0.44
PDLIM2-213ENST00000448520 Q5PR19 223 aa12.3□□□□□ -0.44
PDLIM2-213ENST00000448520 AP1ARQ63HQ0 302 aa12.3□□□□□ -0.44
PDLIM2-213ENST00000448520 LCN8Q6JVE9 175 aa12.3□□□□□ -0.44
PDLIM2-213ENST00000448520 Q71RC1 249 aaPredicted RBP12.3□□□□□ -0.44
PDLIM2-213ENST00000448520 VTCN1Q7Z7D3 282 aa12.3□□□□□ -0.44
PDLIM2-213ENST00000448520 KRT73Q86Y46 540 aa12.3□□□□□ -0.44
PDLIM2-213ENST00000448520 ZNF610Q8N9Z0 462 aa12.3□□□□□ -0.44
PDLIM2-213ENST00000448520 OR4D11Q8NGI4 311 aa12.3□□□□□ -0.44
PDLIM2-213ENST00000448520 PHOSPHO1Q8TCT1 267 aa12.3□□□□□ -0.44
PDLIM2-213ENST00000448520 SLC26A7Q8TE54 656 aa12.3□□□□□ -0.44
PDLIM2-213ENST00000448520 C1GALT1C1Q96EU7 318 aa12.3□□□□□ -0.44
PDLIM2-213ENST00000448520 PIK3IP1Q96FE7 263 aa12.3□□□□□ -0.44
PDLIM2-213ENST00000448520 SH3YL1Q96HL8 342 aaPredicted RBP12.3□□□□□ -0.44
PDLIM2-213ENST00000448520 ZNF607Q96SK3 696 aa12.3□□□□□ -0.44
PDLIM2-213ENST00000448520 HOXD1Q9GZZ0 328 aa12.3□□□□□ -0.44
PDLIM2-213ENST00000448520 OPN3Q9H1Y3 402 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms