RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 CDHR4A6H8M9 788 aa15.66■□□□□ 0.1
DDX56-207ENST00000448192 ZNF716A6NP11 495 aa15.66■□□□□ 0.1
DDX56-207ENST00000448192 FAAHO00519 579 aa15.66■□□□□ 0.1
DDX56-207ENST00000448192 CLOCKO15516 846 aa15.66■□□□□ 0.1
DDX56-207ENST00000448192 ZNF208O43345 1280 aa15.66■□□□□ 0.1
DDX56-207ENST00000448192 DNPH1O43598 174 aa15.66■□□□□ 0.1
DDX56-207ENST00000448192 TGDSO95455 350 aa15.66■□□□□ 0.1
DDX56-207ENST00000448192 CXCR1P25024 350 aa15.66■□□□□ 0.1
DDX56-207ENST00000448192 LARS2Q15031 903 aaKnown RBP15.66■□□□□ 0.1
DDX56-207ENST00000448192 PDK3Q15120 406 aa15.66■□□□□ 0.1
DDX56-207ENST00000448192 CADM2Q8N3J6 435 aa15.66■□□□□ 0.1
DDX56-207ENST00000448192 AKAP1Q92667 903 aaKnown RBP eCLIP15.66■□□□□ 0.1
DDX56-207ENST00000448192 USB1Q9BQ65 265 aaKnown RBP15.66■□□□□ 0.1
DDX56-207ENST00000448192 EBF4Q9BQW3 602 aa15.66■□□□□ 0.1
DDX56-207ENST00000448192 TMEM204Q9BSN7 226 aa15.66■□□□□ 0.1
DDX56-207ENST00000448192 POTEKPQ9BYX7 375 aa15.66■□□□□ 0.1
DDX56-207ENST00000448192 PAIP1Q9H074 479 aaKnown RBP15.66■□□□□ 0.1
DDX56-207ENST00000448192 CACYBPQ9HB71 228 aaKnown RBP15.66■□□□□ 0.1
DDX56-207ENST00000448192 THUMPD1Q9NXG2 353 aaKnown RBP15.66■□□□□ 0.1
DDX56-207ENST00000448192 ZNF232Q9UNY5 417 aa15.66■□□□□ 0.1
DDX56-207ENST00000448192 ZNF443Q9Y2A4 671 aaPredicted RBP15.66■□□□□ 0.1
DDX56-207ENST00000448192 RNF115Q9Y4L5 304 aa15.66■□□□□ 0.1
DDX56-207ENST00000448192 DSPPQ9NZW4 1301 aa15.66■□□□□ 0.1
DDX56-207ENST00000448192 NIPBLQ6KC79 2804 aaeCLIP15.65■□□□□ 0.1
DDX56-207ENST00000448192 A0A0G2JPF8 293 aa15.65■□□□□ 0.1
DDX56-207ENST00000448192 ZC3H12DA2A288 527 aaKnown RBP15.65■□□□□ 0.1
DDX56-207ENST00000448192 HNRNPCL2B2RXH8 293 aa15.65■□□□□ 0.1
DDX56-207ENST00000448192 HNRNPCL3B7ZW38 293 aa15.65■□□□□ 0.1
DDX56-207ENST00000448192 CLIC1O00299 241 aa15.65■□□□□ 0.1
DDX56-207ENST00000448192 GPR171O14626 319 aa15.65■□□□□ 0.1
DDX56-207ENST00000448192 HS3ST1O14792 307 aa15.65■□□□□ 0.1
DDX56-207ENST00000448192 HNRNPCL1O60812 293 aaKnown RBP15.65■□□□□ 0.1
DDX56-207ENST00000448192 RAMP1O60894 148 aa15.65■□□□□ 0.1
DDX56-207ENST00000448192 CD3EP07766 207 aa15.65■□□□□ 0.1
DDX56-207ENST00000448192 HNRNPCL4P0DMR1 293 aa15.65■□□□□ 0.1
DDX56-207ENST00000448192 IMPDH2P12268 514 aa15.65■□□□□ 0.1
DDX56-207ENST00000448192 IGHV1-2P23083 117 aa15.65■□□□□ 0.1
DDX56-207ENST00000448192 AQP5P55064 265 aa15.65■□□□□ 0.1
DDX56-207ENST00000448192 COPZ1P61923 177 aa15.65■□□□□ 0.1
DDX56-207ENST00000448192 SLC35A1P78382 337 aa15.65■□□□□ 0.1
DDX56-207ENST00000448192 NCMAPQ5T1S8 102 aa15.65■□□□□ 0.1
DDX56-207ENST00000448192 GOLGA6L1Q8N7Z2 621 aa15.65■□□□□ 0.1
DDX56-207ENST00000448192 TMEM171Q8WVE6 324 aa15.65■□□□□ 0.1
DDX56-207ENST00000448192 APH1AQ96BI3 265 aa15.65■□□□□ 0.1
DDX56-207ENST00000448192 C18orf12Q96KH6 178 aa15.65■□□□□ 0.1
DDX56-207ENST00000448192 NAA11Q9BSU3 229 aaPredicted RBP15.65■□□□□ 0.1
DDX56-207ENST00000448192 ADAM19Q9H013 955 aa15.65■□□□□ 0.1
DDX56-207ENST00000448192 RAD21L1Q9H4I0 556 aa15.65■□□□□ 0.1
DDX56-207ENST00000448192 A0A096LPI6 279 aa15.64■□□□□ 0.09
DDX56-207ENST00000448192 NR5A2O00482 541 aa15.64■□□□□ 0.09
DDX56-207ENST00000448192 EIF1BO60739 113 aaKnown RBP15.64■□□□□ 0.09
DDX56-207ENST00000448192 MRPL33O75394 65 aaKnown RBP15.64■□□□□ 0.09
DDX56-207ENST00000448192 CNOT4O95628 575 aaKnown RBP15.64■□□□□ 0.09
DDX56-207ENST00000448192 NUDT7P0C024 238 aa15.64■□□□□ 0.09
DDX56-207ENST00000448192 GGT1P19440 569 aa15.64■□□□□ 0.09
DDX56-207ENST00000448192 NCF2P19878 526 aaPredicted RBP15.64■□□□□ 0.09
DDX56-207ENST00000448192 ADSLP30566 484 aaPredicted RBP15.64■□□□□ 0.09
DDX56-207ENST00000448192 MAP2K6P52564 334 aa15.64■□□□□ 0.09
DDX56-207ENST00000448192 PPA1Q15181 289 aa15.64■□□□□ 0.09
DDX56-207ENST00000448192 RGNQ15493 299 aa15.64■□□□□ 0.09
DDX56-207ENST00000448192 RNF220Q5VTB9 566 aa15.64■□□□□ 0.09
DDX56-207ENST00000448192 FBXW9Q5XUX1 488 aa15.64■□□□□ 0.09
DDX56-207ENST00000448192 YTHDF3Q7Z739 585 aaKnown RBP15.64■□□□□ 0.09
DDX56-207ENST00000448192 ATG4DQ86TL0 474 aaPredicted RBP15.64■□□□□ 0.09
DDX56-207ENST00000448192 CLIP4Q8N3C7 705 aa15.64■□□□□ 0.09
DDX56-207ENST00000448192 ZNF611Q8N823 705 aa15.64■□□□□ 0.09
DDX56-207ENST00000448192 MAL2Q969L2 176 aa15.64■□□□□ 0.09
DDX56-207ENST00000448192 MUCL1Q96DR8 90 aa15.64■□□□□ 0.09
DDX56-207ENST00000448192 Q96MF0 132 aa15.64■□□□□ 0.09
DDX56-207ENST00000448192 SMR3AQ99954 134 aa15.64■□□□□ 0.09
DDX56-207ENST00000448192 CCDC28BQ9BUN5 200 aa15.64■□□□□ 0.09
DDX56-207ENST00000448192 ARMC7Q9H6L4 198 aa15.64■□□□□ 0.09
DDX56-207ENST00000448192 CCDC167Q9P0B6 97 aa15.64■□□□□ 0.09
DDX56-207ENST00000448192 CIB4A0PJX0 185 aa15.63■□□□□ 0.09
DDX56-207ENST00000448192 C5orf58C9J3I9 102 aa15.63■□□□□ 0.09
DDX56-207ENST00000448192 THBS1P07996 1170 aa15.63■□□□□ 0.09
DDX56-207ENST00000448192 INHBBP09529 407 aa15.63■□□□□ 0.09
DDX56-207ENST00000448192 PRG2P13727 222 aa15.63■□□□□ 0.09
DDX56-207ENST00000448192 COX5AP20674 150 aa15.63■□□□□ 0.09
DDX56-207ENST00000448192 NTF4P34130 210 aa15.63■□□□□ 0.09
DDX56-207ENST00000448192 IDUAP35475 653 aa15.63■□□□□ 0.09
DDX56-207ENST00000448192 ACAA2P42765 397 aaKnown RBP15.63■□□□□ 0.09
DDX56-207ENST00000448192 PTH2RP49190 550 aa15.63■□□□□ 0.09
DDX56-207ENST00000448192 MRPL19P49406 292 aaKnown RBP15.63■□□□□ 0.09
DDX56-207ENST00000448192 SLC16A1P53985 500 aa15.63■□□□□ 0.09
DDX56-207ENST00000448192 H3F3AP84243 136 aa15.63■□□□□ 0.09
DDX56-207ENST00000448192 BSPH1Q075Z2 132 aa15.63■□□□□ 0.09
DDX56-207ENST00000448192 CEACAM7Q14002 265 aa15.63■□□□□ 0.09
DDX56-207ENST00000448192 ZSWIM7Q19AV6 140 aa15.63■□□□□ 0.09
DDX56-207ENST00000448192 ZNF311Q5JNZ3 666 aa15.63■□□□□ 0.09
DDX56-207ENST00000448192 WBP2NLQ6ICG8 309 aa15.63■□□□□ 0.09
DDX56-207ENST00000448192 BLOC1S3Q6QNY0 202 aa15.63■□□□□ 0.09
DDX56-207ENST00000448192 FUNDC1Q8IVP5 155 aa15.63■□□□□ 0.09
DDX56-207ENST00000448192 ZNF433Q8N7K0 673 aaPredicted RBP15.63■□□□□ 0.09
DDX56-207ENST00000448192 SPDL1Q96EA4 605 aa15.63■□□□□ 0.09
DDX56-207ENST00000448192 SPATA9Q9BWV2 254 aa15.63■□□□□ 0.09
DDX56-207ENST00000448192 CXorf56Q9H5V9 222 aa15.63■□□□□ 0.09
DDX56-207ENST00000448192 INTS9Q9NV88 658 aaKnown RBP15.63■□□□□ 0.09
DDX56-207ENST00000448192 IFT52Q9Y366 437 aa15.63■□□□□ 0.09
DDX56-207ENST00000448192 CCT8L1PA6NM43 557 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms