RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 SURF4O15260 269 aa17.76■□□□□ 0.43
HMGA1-205ENST00000447654 POP4O95707 220 aaKnown RBP17.76■□□□□ 0.43
HMGA1-205ENST00000447654 IFNA10P01566 189 aa17.76■□□□□ 0.43
HMGA1-205ENST00000447654 CD8AP01732 235 aa17.76■□□□□ 0.43
HMGA1-205ENST00000447654 MT-ND4LP03901 98 aa17.76■□□□□ 0.43
HMGA1-205ENST00000447654 SLC25A4P12235 298 aa17.76■□□□□ 0.43
HMGA1-205ENST00000447654 CBR1P16152 277 aa17.76■□□□□ 0.43
HMGA1-205ENST00000447654 ZNF8P17098 575 aaPredicted RBP17.76■□□□□ 0.43
HMGA1-205ENST00000447654 ZNF763Q0D2J5 394 aa17.76■□□□□ 0.43
HMGA1-205ENST00000447654 TSPAN31Q12999 210 aa17.76■□□□□ 0.43
HMGA1-205ENST00000447654 SSX2Q16385 188 aa17.76■□□□□ 0.43
HMGA1-205ENST00000447654 ZXDCQ2QGD7 858 aaPredicted RBP17.76■□□□□ 0.43
HMGA1-205ENST00000447654 TPGS1Q6ZTW0 290 aa17.76■□□□□ 0.43
HMGA1-205ENST00000447654 OVCH1Q7RTY7 1134 aa17.76■□□□□ 0.43
HMGA1-205ENST00000447654 GID4Q8IVV7 300 aa17.76■□□□□ 0.43
HMGA1-205ENST00000447654 OR4K1Q8NGD4 311 aa17.76■□□□□ 0.43
HMGA1-205ENST00000447654 OR5D16Q8NGK9 328 aa17.76■□□□□ 0.43
HMGA1-205ENST00000447654 SLC25A28Q96A46 364 aa17.76■□□□□ 0.43
HMGA1-205ENST00000447654 ZNF707Q96C28 371 aaPredicted RBP17.76■□□□□ 0.43
HMGA1-205ENST00000447654 H2AFY2Q9P0M6 372 aaPredicted RBP17.76■□□□□ 0.43
HMGA1-205ENST00000447654 PRSS21Q9Y6M0 314 aa17.76■□□□□ 0.43
HMGA1-205ENST00000447654 DENND4CQ5VZ89 1909 aa17.75■□□□□ 0.43
HMGA1-205ENST00000447654 CCDC85CA6NKD9 419 aa17.75■□□□□ 0.43
HMGA1-205ENST00000447654 FLRT2O43155 660 aa17.75■□□□□ 0.43
HMGA1-205ENST00000447654 TXNL1O43396 289 aa17.75■□□□□ 0.43
HMGA1-205ENST00000447654 ZNF821O75541 412 aaPredicted RBP17.75■□□□□ 0.43
HMGA1-205ENST00000447654 SLC25A12O75746 678 aa17.75■□□□□ 0.43
HMGA1-205ENST00000447654 MT-ND5P03915 603 aa17.75■□□□□ 0.43
HMGA1-205ENST00000447654 LINC00271P0C7V0 271 aa17.75■□□□□ 0.43
HMGA1-205ENST00000447654 HPGDP15428 266 aa17.75■□□□□ 0.43
HMGA1-205ENST00000447654 ACRV1P26436 265 aa17.75■□□□□ 0.43
HMGA1-205ENST00000447654 RAB5CP51148 216 aa17.75■□□□□ 0.43
HMGA1-205ENST00000447654 GRHL2Q6ISB3 625 aa17.75■□□□□ 0.43
HMGA1-205ENST00000447654 PPCDCQ96CD2 204 aa17.75■□□□□ 0.43
HMGA1-205ENST00000447654 ALG8Q9BVK2 526 aa17.75■□□□□ 0.43
HMGA1-205ENST00000447654 ISG20L2Q9H9L3 353 aaKnown RBP17.75■□□□□ 0.43
HMGA1-205ENST00000447654 TAS2R10Q9NYW0 307 aa17.75■□□□□ 0.43
HMGA1-205ENST00000447654 XIRP2A4UGR9 3374 aa17.75■□□□□ 0.43
HMGA1-205ENST00000447654 GNG14A0A1W2PPG7 69 aa17.74■□□□□ 0.43
HMGA1-205ENST00000447654 GAPDHSO14556 408 aaPredicted RBP17.74■□□□□ 0.43
HMGA1-205ENST00000447654 ARL6IP5O75915 188 aa17.74■□□□□ 0.43
HMGA1-205ENST00000447654 CLTBP09497 229 aa17.74■□□□□ 0.43
HMGA1-205ENST00000447654 VSIG10L2P0DP72 767 aa17.74■□□□□ 0.43
HMGA1-205ENST00000447654 SRSF4Q08170 494 aaKnown RBP17.74■□□□□ 0.43
HMGA1-205ENST00000447654 ANKRD39Q53RE8 183 aa17.74■□□□□ 0.43
HMGA1-205ENST00000447654 C18orf63Q68DL7 685 aa17.74■□□□□ 0.43
HMGA1-205ENST00000447654 SLC38A5Q8WUX1 472 aa17.74■□□□□ 0.43
HMGA1-205ENST00000447654 ACOT11Q8WXI4 607 aaPredicted RBP17.74■□□□□ 0.43
HMGA1-205ENST00000447654 GPA33Q99795 319 aa17.74■□□□□ 0.43
HMGA1-205ENST00000447654 MRI1Q9BV20 369 aa17.74■□□□□ 0.43
HMGA1-205ENST00000447654 GGACTQ9BVM4 153 aa17.74■□□□□ 0.43
HMGA1-205ENST00000447654 BOCQ9BWV1 1114 aa17.74■□□□□ 0.43
HMGA1-205ENST00000447654 XKR8Q9H6D3 395 aa17.74■□□□□ 0.43
HMGA1-205ENST00000447654 ASF1BQ9NVP2 202 aa17.74■□□□□ 0.43
HMGA1-205ENST00000447654 SLC22A14Q9Y267 594 aa17.74■□□□□ 0.43
HMGA1-205ENST00000447654 A0A1B0GV90 55 aa17.74■□□□□ 0.43
HMGA1-205ENST00000447654 ACOT7O00154 380 aa17.74■□□□□ 0.43
HMGA1-205ENST00000447654 PCDH8O95206 1070 aa17.74■□□□□ 0.43
HMGA1-205ENST00000447654 LATS1O95835 1130 aa17.74■□□□□ 0.43
HMGA1-205ENST00000447654 FURINP09958 794 aa17.74■□□□□ 0.43
HMGA1-205ENST00000447654 CD79AP11912 226 aa17.74■□□□□ 0.43
HMGA1-205ENST00000447654 CD70P32970 193 aa17.74■□□□□ 0.43
HMGA1-205ENST00000447654 LUMP51884 338 aaPredicted RBP17.74■□□□□ 0.43
HMGA1-205ENST00000447654 PNLIPRP2P54317 469 aa17.74■□□□□ 0.43
HMGA1-205ENST00000447654 C9orf152Q5JTZ5 239 aa17.74■□□□□ 0.43
HMGA1-205ENST00000447654 C1orf53Q5VUE5 145 aa17.74■□□□□ 0.43
HMGA1-205ENST00000447654 RAB12Q6IQ22 244 aa17.74■□□□□ 0.43
HMGA1-205ENST00000447654 ADCK2Q7Z695 626 aa17.74■□□□□ 0.43
HMGA1-205ENST00000447654 PARGQ86W56 976 aa17.74■□□□□ 0.43
HMGA1-205ENST00000447654 CMTM4Q8IZR5 234 aa17.74■□□□□ 0.43
HMGA1-205ENST00000447654 RNF175Q8N4F7 328 aa17.74■□□□□ 0.43
HMGA1-205ENST00000447654 ART5Q96L15 291 aa17.74■□□□□ 0.43
HMGA1-205ENST00000447654 KLHL31Q9H511 634 aa17.74■□□□□ 0.43
HMGA1-205ENST00000447654 EGLN3Q9H6Z9 239 aa17.74■□□□□ 0.43
HMGA1-205ENST00000447654 MMP26Q9NRE1 261 aa17.74■□□□□ 0.43
HMGA1-205ENST00000447654 MAN2C1Q9NTJ4 1040 aa17.74■□□□□ 0.43
HMGA1-205ENST00000447654 TMEM100Q9NV29 134 aa17.74■□□□□ 0.43
HMGA1-205ENST00000447654 UQCC1Q9NVA1 299 aa17.74■□□□□ 0.43
HMGA1-205ENST00000447654 MRPL15Q9P015 296 aaKnown RBP17.74■□□□□ 0.43
HMGA1-205ENST00000447654 OR10H1Q9Y4A9 318 aa17.74■□□□□ 0.43
HMGA1-205ENST00000447654 REV3LO60673 3130 aa17.73■□□□□ 0.43
HMGA1-205ENST00000447654 A0A1W2PRU2 124 aa17.73■□□□□ 0.43
HMGA1-205ENST00000447654 ZNF879B4DU55 563 aa17.73■□□□□ 0.43
HMGA1-205ENST00000447654 CKMP06732 381 aa17.73■□□□□ 0.43
HMGA1-205ENST00000447654 MPC1LP0DKB6 136 aa17.73■□□□□ 0.43
HMGA1-205ENST00000447654 SDHBP21912 280 aa17.73■□□□□ 0.43
HMGA1-205ENST00000447654 TRHRP34981 398 aaPredicted RBP17.73■□□□□ 0.43
HMGA1-205ENST00000447654 CTSOP43234 321 aaPredicted RBP17.73■□□□□ 0.43
HMGA1-205ENST00000447654 PNLIPRP1P54315 467 aa17.73■□□□□ 0.43
HMGA1-205ENST00000447654 DOC2AQ14183 400 aa17.73■□□□□ 0.43
HMGA1-205ENST00000447654 FAM27D1Q5T7N8 215 aa17.73■□□□□ 0.43
HMGA1-205ENST00000447654 REC114Q7Z4M0 266 aa17.73■□□□□ 0.43
HMGA1-205ENST00000447654 DCAF4L2Q8NA75 395 aa17.73■□□□□ 0.43
HMGA1-205ENST00000447654 KDF1Q8NAX2 398 aaPredicted RBP17.73■□□□□ 0.43
HMGA1-205ENST00000447654 OR4D9Q8NGE8 314 aa17.73■□□□□ 0.43
HMGA1-205ENST00000447654 TFGQ92734 400 aaPredicted RBP17.73■□□□□ 0.43
HMGA1-205ENST00000447654 C14orf144Q96I85 54 aa17.73■□□□□ 0.43
HMGA1-205ENST00000447654 PRRC1Q96M27 445 aa17.73■□□□□ 0.43
HMGA1-205ENST00000447654 NDC1Q9BTX1 674 aa17.73■□□□□ 0.43
HMGA1-205ENST00000447654 TUBA4BQ9H853 241 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms