RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 PLXDC2Q6UX71 529 aa11.11□□□□□ -0.63
SSR4-205ENST00000447375 ZNF836Q6ZNA1 936 aa11.11□□□□□ -0.63
SSR4-205ENST00000447375 ESPNLQ6ZVH7 1005 aa11.11□□□□□ -0.63
SSR4-205ENST00000447375 PLEKHM3Q6ZWE6 761 aa11.11□□□□□ -0.63
SSR4-205ENST00000447375 MTDHQ86UE4 582 aaKnown RBP11.11□□□□□ -0.63
SSR4-205ENST00000447375 SNX32Q86XE0 403 aa11.11□□□□□ -0.63
SSR4-205ENST00000447375 PTOV1Q86YD1 416 aa11.11□□□□□ -0.63
SSR4-205ENST00000447375 ZNF440Q8IYI8 595 aa11.11□□□□□ -0.63
SSR4-205ENST00000447375 OR2V1Q8NHB1 315 aa11.11□□□□□ -0.63
SSR4-205ENST00000447375 NFKBIDQ8NI38 313 aa11.11□□□□□ -0.63
SSR4-205ENST00000447375 RP9Q8TA86 221 aaKnown RBP11.11□□□□□ -0.63
SSR4-205ENST00000447375 SH3GL1Q99961 368 aa11.11□□□□□ -0.63
SSR4-205ENST00000447375 CCDC106Q9BWC9 280 aa11.11□□□□□ -0.63
SSR4-205ENST00000447375 SPATA9Q9BWV2 254 aa11.11□□□□□ -0.63
SSR4-205ENST00000447375 RSPO3Q9BXY4 272 aaPredicted RBP11.11□□□□□ -0.63
SSR4-205ENST00000447375 FAM107BQ9H098 131 aa11.11□□□□□ -0.63
SSR4-205ENST00000447375 NSRP1Q9H0G5 558 aaKnown RBP11.11□□□□□ -0.63
SSR4-205ENST00000447375 NANOGQ9H9S0 305 aa11.11□□□□□ -0.63
SSR4-205ENST00000447375 PAQR5Q9NXK6 330 aaPredicted RBP11.11□□□□□ -0.63
SSR4-205ENST00000447375 FAM53CQ9NYF3 392 aa11.11□□□□□ -0.63
SSR4-205ENST00000447375 ZNF443Q9Y2A4 671 aaPredicted RBP11.11□□□□□ -0.63
SSR4-205ENST00000447375 ZNF175Q9Y473 711 aa11.11□□□□□ -0.63
SSR4-205ENST00000447375 CHST2Q9Y4C5 530 aa11.11□□□□□ -0.63
SSR4-205ENST00000447375 DSCAMO60469 2012 aa11.1□□□□□ -0.63
SSR4-205ENST00000447375 CFAP73A6NFT4 308 aa11.1□□□□□ -0.63
SSR4-205ENST00000447375 A8MV72 311 aaPredicted RBP11.1□□□□□ -0.63
SSR4-205ENST00000447375 MRASO14807 208 aa11.1□□□□□ -0.63
SSR4-205ENST00000447375 OPN1LWP04000 364 aa11.1□□□□□ -0.63
SSR4-205ENST00000447375 PABPC4LP0CB38 370 aaKnown RBP11.1□□□□□ -0.63
SSR4-205ENST00000447375 TMIGD3P0DMS9 266 aaPredicted RBP11.1□□□□□ -0.63
SSR4-205ENST00000447375 SLC6A2P23975 617 aa11.1□□□□□ -0.63
SSR4-205ENST00000447375 SHC1P29353 583 aa11.1□□□□□ -0.63
SSR4-205ENST00000447375 APOBEC1P41238 236 aaKnown RBP11.1□□□□□ -0.63
SSR4-205ENST00000447375 ACAA2P42765 397 aaKnown RBP11.1□□□□□ -0.63
SSR4-205ENST00000447375 EIF1AXP47813 144 aaKnown RBP11.1□□□□□ -0.63
SSR4-205ENST00000447375 IDH2P48735 452 aaKnown RBP11.1□□□□□ -0.63
SSR4-205ENST00000447375 GZMMP51124 257 aa11.1□□□□□ -0.63
SSR4-205ENST00000447375 ATP5J2P56134 94 aa11.1□□□□□ -0.63
SSR4-205ENST00000447375 RBBP4Q09028 425 aa11.1□□□□□ -0.63
SSR4-205ENST00000447375 MERTKQ12866 999 aa11.1□□□□□ -0.63
SSR4-205ENST00000447375 FOXF2Q12947 444 aa11.1□□□□□ -0.63
SSR4-205ENST00000447375 SCARB2Q14108 478 aa11.1□□□□□ -0.63
SSR4-205ENST00000447375 VEZF1Q14119 521 aa11.1□□□□□ -0.63
SSR4-205ENST00000447375 SGCBQ16585 318 aa11.1□□□□□ -0.63
SSR4-205ENST00000447375 TMEM176BQ3YBM2 270 aaPredicted RBP11.1□□□□□ -0.63
SSR4-205ENST00000447375 ZNF311Q5JNZ3 666 aa11.1□□□□□ -0.63
SSR4-205ENST00000447375 EEF1A1P5Q5VTE0 462 aa11.1□□□□□ -0.63
SSR4-205ENST00000447375 REP15Q6BDI9 236 aa11.1□□□□□ -0.63
SSR4-205ENST00000447375 OR2A2Q6IF42 318 aa11.1□□□□□ -0.63
SSR4-205ENST00000447375 NET1Q7Z628 596 aaPredicted RBP11.1□□□□□ -0.63
SSR4-205ENST00000447375 PIGWQ7Z7B1 504 aa11.1□□□□□ -0.63
SSR4-205ENST00000447375 SERPINA11Q86U17 422 aa11.1□□□□□ -0.63
SSR4-205ENST00000447375 CLIP4Q8N3C7 705 aa11.1□□□□□ -0.63
SSR4-205ENST00000447375 PCYOX1LQ8NBM8 494 aa11.1□□□□□ -0.63
SSR4-205ENST00000447375 C11orf65Q8NCR3 313 aa11.1□□□□□ -0.63
SSR4-205ENST00000447375 OR10D3Q8NH80 312 aa11.1□□□□□ -0.63
SSR4-205ENST00000447375 TMEM171Q8WVE6 324 aa11.1□□□□□ -0.63
SSR4-205ENST00000447375 FIG4Q92562 907 aa11.1□□□□□ -0.63
SSR4-205ENST00000447375 SLC35B4Q969S0 331 aa11.1□□□□□ -0.63
SSR4-205ENST00000447375 ZNF845Q96IR2 970 aaPredicted RBP11.1□□□□□ -0.63
SSR4-205ENST00000447375 KLHL15Q96M94 604 aa11.1□□□□□ -0.63
SSR4-205ENST00000447375 PINK1Q9BXM7 581 aa11.1□□□□□ -0.63
SSR4-205ENST00000447375 REG4Q9BYZ8 158 aa11.1□□□□□ -0.63
SSR4-205ENST00000447375 MYLK2Q9H1R3 596 aa11.1□□□□□ -0.63
SSR4-205ENST00000447375 ARMC7Q9H6L4 198 aa11.1□□□□□ -0.63
SSR4-205ENST00000447375 TMEM185BQ9H7F4 350 aa11.1□□□□□ -0.63
SSR4-205ENST00000447375 RNF122Q9H9V4 155 aa11.1□□□□□ -0.63
SSR4-205ENST00000447375 CACYBPQ9HB71 228 aaKnown RBP11.1□□□□□ -0.63
SSR4-205ENST00000447375 ZNF701Q9NV72 531 aaPredicted RBP11.1□□□□□ -0.63
SSR4-205ENST00000447375 GID8Q9NWU2 228 aa11.1□□□□□ -0.63
SSR4-205ENST00000447375 ZNF226Q9NYT6 803 aa11.1□□□□□ -0.63
SSR4-205ENST00000447375 ROS1P08922 2347 aa11.1□□□□□ -0.63
SSR4-205ENST00000447375 PRR14LQ5THK1 2151 aa11.1□□□□□ -0.63
SSR4-205ENST00000447375 GJE1A6NN92 205 aa11.09□□□□□ -0.63
SSR4-205ENST00000447375 AP3D1O14617 1153 aa11.09□□□□□ -0.63
SSR4-205ENST00000447375 TNFSF11O14788 317 aa11.09□□□□□ -0.63
SSR4-205ENST00000447375 KCNAB3O43448 404 aa11.09□□□□□ -0.63
SSR4-205ENST00000447375 SPRY1O43609 319 aaPredicted RBP11.09□□□□□ -0.63
SSR4-205ENST00000447375 CRHP06850 196 aa11.09□□□□□ -0.63
SSR4-205ENST00000447375 COX4I1P13073 169 aa11.09□□□□□ -0.63
SSR4-205ENST00000447375 PRKAR1BP31321 381 aa11.09□□□□□ -0.63
SSR4-205ENST00000447375 SFTPDP35247 375 aa11.09□□□□□ -0.63
SSR4-205ENST00000447375 SLC1A3P43003 542 aa11.09□□□□□ -0.63
SSR4-205ENST00000447375 HTR3AP46098 478 aa11.09□□□□□ -0.63
SSR4-205ENST00000447375 CARD18P57730 90 aa11.09□□□□□ -0.63
SSR4-205ENST00000447375 EPS8Q12929 822 aa11.09□□□□□ -0.63
SSR4-205ENST00000447375 SELENBP1Q13228 472 aa11.09□□□□□ -0.63
SSR4-205ENST00000447375 PON3Q15166 354 aa11.09□□□□□ -0.63
SSR4-205ENST00000447375 CYP51A1Q16850 503 aa11.09□□□□□ -0.63
SSR4-205ENST00000447375 CLEC12BQ2HXU8 276 aa11.09□□□□□ -0.63
SSR4-205ENST00000447375 PDSS1Q5T2R2 415 aa11.09□□□□□ -0.63
SSR4-205ENST00000447375 HBMQ6B0K9 141 aa11.09□□□□□ -0.63
SSR4-205ENST00000447375 ZNF550Q7Z398 422 aa11.09□□□□□ -0.63
SSR4-205ENST00000447375 GRINAQ7Z429 371 aa11.09□□□□□ -0.63
SSR4-205ENST00000447375 CALHM3Q86XJ0 350 aa11.09□□□□□ -0.63
SSR4-205ENST00000447375 KRT73Q86Y46 540 aa11.09□□□□□ -0.63
SSR4-205ENST00000447375 HIPK4Q8NE63 616 aa11.09□□□□□ -0.63
SSR4-205ENST00000447375 OR8J3Q8NGG0 315 aa11.09□□□□□ -0.63
SSR4-205ENST00000447375 ZNF563Q8TA94 476 aa11.09□□□□□ -0.63
SSR4-205ENST00000447375 FNDC9Q8TBE3 224 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms