RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 FREM3P0C091 2139 aa15.5■□□□□ 0.07
LIME1-202ENST00000444951 NPIPA2E9PIF3 369 aa15.5■□□□□ 0.07
LIME1-202ENST00000444951 NPIPA3F8WFD2 350 aa15.5■□□□□ 0.07
LIME1-202ENST00000444951 KPNA4O00629 521 aaPredicted RBP15.5■□□□□ 0.07
LIME1-202ENST00000444951 GNGT2O14610 69 aa15.5■□□□□ 0.07
LIME1-202ENST00000444951 CHP2O43745 196 aa15.5■□□□□ 0.07
LIME1-202ENST00000444951 HCN1O60741 890 aa15.5■□□□□ 0.07
LIME1-202ENST00000444951 LYPD3O95274 346 aa15.5■□□□□ 0.07
LIME1-202ENST00000444951 CST1P01037 141 aa15.5■□□□□ 0.07
LIME1-202ENST00000444951 H1F0P07305 194 aaKnown RBP15.5■□□□□ 0.07
LIME1-202ENST00000444951 PNMTP11086 282 aa15.5■□□□□ 0.07
LIME1-202ENST00000444951 CHMP24386 653 aa15.5■□□□□ 0.07
LIME1-202ENST00000444951 ADH6P28332 368 aa15.5■□□□□ 0.07
LIME1-202ENST00000444951 SHC1P29353 583 aa15.5■□□□□ 0.07
LIME1-202ENST00000444951 RRM2P31350 389 aa15.5■□□□□ 0.07
LIME1-202ENST00000444951 MAGEA2P43356 314 aa15.5■□□□□ 0.07
LIME1-202ENST00000444951 ST3GAL3Q11203 375 aa15.5■□□□□ 0.07
LIME1-202ENST00000444951 PPP1R8Q12972 351 aaKnown RBP15.5■□□□□ 0.07
LIME1-202ENST00000444951 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.5■□□□□ 0.07
LIME1-202ENST00000444951 TMEM176BQ3YBM2 270 aaPredicted RBP15.5■□□□□ 0.07
LIME1-202ENST00000444951 WDR88Q6ZMY6 472 aa15.5■□□□□ 0.07
LIME1-202ENST00000444951 PIWIL3Q7Z3Z3 882 aaKnown RBP15.5■□□□□ 0.07
LIME1-202ENST00000444951 NKAIN4Q8IVV8 208 aa15.5■□□□□ 0.07
LIME1-202ENST00000444951 GHDCQ8N2G8 530 aa15.5■□□□□ 0.07
LIME1-202ENST00000444951 ITLN2Q8WWU7 325 aaPredicted RBP15.5■□□□□ 0.07
LIME1-202ENST00000444951 SLC38A4Q969I6 547 aa15.5■□□□□ 0.07
LIME1-202ENST00000444951 MARVELD3Q96A59 401 aa15.5■□□□□ 0.07
LIME1-202ENST00000444951 POLR2J2Q9GZM3 115 aaKnown RBP15.5■□□□□ 0.07
LIME1-202ENST00000444951 POLR2J3Q9H1A7 115 aaKnown RBP15.5■□□□□ 0.07
LIME1-202ENST00000444951 NMNAT1Q9HAN9 279 aaPredicted RBP15.5■□□□□ 0.07
LIME1-202ENST00000444951 ACAD8Q9UKU7 415 aa15.5■□□□□ 0.07
LIME1-202ENST00000444951 A0A1B0GUH1 482 aa15.49■□□□□ 0.07
LIME1-202ENST00000444951 PRSS44E7EML9 344 aa15.49■□□□□ 0.07
LIME1-202ENST00000444951 H0YC42 278 aa15.49■□□□□ 0.07
LIME1-202ENST00000444951 ETV2O00321 342 aaPredicted RBP15.49■□□□□ 0.07
LIME1-202ENST00000444951 PRSS23O95084 383 aa15.49■□□□□ 0.07
LIME1-202ENST00000444951 GADD45GO95257 159 aa15.49■□□□□ 0.07
LIME1-202ENST00000444951 ELK4P28324 431 aa15.49■□□□□ 0.07
LIME1-202ENST00000444951 TPD52P55327 224 aaPredicted RBP15.49■□□□□ 0.07
LIME1-202ENST00000444951 CLDN20P56880 219 aa15.49■□□□□ 0.07
LIME1-202ENST00000444951 SELENBP1Q13228 472 aa15.49■□□□□ 0.07
LIME1-202ENST00000444951 TRAM2Q15035 370 aa15.49■□□□□ 0.07
LIME1-202ENST00000444951 KRTCAP3Q53RY4 240 aa15.49■□□□□ 0.07
LIME1-202ENST00000444951 SP5Q6BEB4 398 aaPredicted RBP15.49■□□□□ 0.07
LIME1-202ENST00000444951 C3orf33Q6P1S2 294 aa15.49■□□□□ 0.07
LIME1-202ENST00000444951 C10orf67Q8IYJ2 551 aa15.49■□□□□ 0.07
LIME1-202ENST00000444951 OFCC1Q8IZS5 231 aa15.49■□□□□ 0.07
LIME1-202ENST00000444951 PAPD5Q8NDF8 572 aaKnown RBP15.49■□□□□ 0.07
LIME1-202ENST00000444951 OR5M9Q8NGP3 310 aa15.49■□□□□ 0.07
LIME1-202ENST00000444951 TMEM255BQ8WV15 326 aa15.49■□□□□ 0.07
LIME1-202ENST00000444951 ALKBH4Q9NXW9 302 aa15.49■□□□□ 0.07
LIME1-202ENST00000444951 SH3BGRL2Q9UJC5 107 aa15.49■□□□□ 0.07
LIME1-202ENST00000444951 CAMK2AQ9UQM7 478 aa15.49■□□□□ 0.07
LIME1-202ENST00000444951 SPIN1Q9Y657 262 aaPredicted RBP15.49■□□□□ 0.07
LIME1-202ENST00000444951 A0A087WUJ7 227 aa15.48■□□□□ 0.07
LIME1-202ENST00000444951 TRGV8A0A0C4DH27 118 aa15.48■□□□□ 0.07
LIME1-202ENST00000444951 A0A1W2PNR3 127 aa15.48■□□□□ 0.07
LIME1-202ENST00000444951 ZC3H12DA2A288 527 aaKnown RBP15.48■□□□□ 0.07
LIME1-202ENST00000444951 H0YHG0 523 aa15.48■□□□□ 0.07
LIME1-202ENST00000444951 AQP7O14520 342 aa15.48■□□□□ 0.07
LIME1-202ENST00000444951 EIF1AYO14602 144 aaKnown RBP15.48■□□□□ 0.07
LIME1-202ENST00000444951 KRT36O76013 467 aa15.48■□□□□ 0.07
LIME1-202ENST00000444951 ACTL6AO96019 429 aa15.48■□□□□ 0.07
LIME1-202ENST00000444951 LHX2P50458 406 aa15.48■□□□□ 0.07
LIME1-202ENST00000444951 DLX5P56178 289 aa15.48■□□□□ 0.07
LIME1-202ENST00000444951 RAC1P63000 192 aa15.48■□□□□ 0.07
LIME1-202ENST00000444951 ELF3P78545 371 aaPredicted RBP15.48■□□□□ 0.07
LIME1-202ENST00000444951 CRYZQ08257 329 aaKnown RBP15.48■□□□□ 0.07
LIME1-202ENST00000444951 SWT1Q5T5J6 900 aaKnown RBP15.48■□□□□ 0.07
LIME1-202ENST00000444951 VASNQ6EMK4 673 aa15.48■□□□□ 0.07
LIME1-202ENST00000444951 OR2T5Q6IEZ7 315 aa15.48■□□□□ 0.07
LIME1-202ENST00000444951 ARHGAP11AQ6P4F7 1023 aa15.48■□□□□ 0.07
LIME1-202ENST00000444951 TTC33Q6PID6 262 aaPredicted RBP15.48■□□□□ 0.07
LIME1-202ENST00000444951 PIK3C3Q8NEB9 887 aa15.48■□□□□ 0.07
LIME1-202ENST00000444951 OR2T29Q8NH02 315 aa15.48■□□□□ 0.07
LIME1-202ENST00000444951 DDIT4LQ96D03 193 aa15.48■□□□□ 0.07
LIME1-202ENST00000444951 CCDC120Q96HB5 630 aa15.48■□□□□ 0.07
LIME1-202ENST00000444951 OR5B2Q96R09 309 aa15.48■□□□□ 0.07
LIME1-202ENST00000444951 TIMP4Q99727 224 aa15.48■□□□□ 0.07
LIME1-202ENST00000444951 PRSS27Q9BQR3 290 aa15.48■□□□□ 0.07
LIME1-202ENST00000444951 MAN2C1Q9NTJ4 1040 aa15.48■□□□□ 0.07
LIME1-202ENST00000444951 VNN3Q9NY84 501 aa15.48■□□□□ 0.07
LIME1-202ENST00000444951 STOML1Q9UBI4 398 aa15.48■□□□□ 0.07
LIME1-202ENST00000444951 AP4B1Q9Y6B7 739 aa15.48■□□□□ 0.07
LIME1-202ENST00000444951 U3KQV3 271 aa15.48■□□□□ 0.07
LIME1-202ENST00000444951 PKDREJQ9NTG1 2253 aa15.48■□□□□ 0.07
LIME1-202ENST00000444951 DCHS2Q6V1P9 2916 aa15.47■□□□□ 0.07
LIME1-202ENST00000444951 OTOGQ6ZRI0 2925 aa15.47■□□□□ 0.07
LIME1-202ENST00000444951 TRBV4-1A0A0J9YWV2 114 aa15.47■□□□□ 0.07
LIME1-202ENST00000444951 A0A1B0GVC2 190 aa15.47■□□□□ 0.07
LIME1-202ENST00000444951 LINC01387J3KSC0 135 aa15.47■□□□□ 0.07
LIME1-202ENST00000444951 TNFRSF11BO00300 401 aa15.47■□□□□ 0.07
LIME1-202ENST00000444951 TNFSF11O14788 317 aa15.47■□□□□ 0.07
LIME1-202ENST00000444951 HNRNPRO43390 633 aaKnown RBP15.47■□□□□ 0.07
LIME1-202ENST00000444951 PIP5K1CO60331 668 aa15.47■□□□□ 0.07
LIME1-202ENST00000444951 THRBP10828 461 aa15.47■□□□□ 0.07
LIME1-202ENST00000444951 ABOP16442 354 aa15.47■□□□□ 0.07
LIME1-202ENST00000444951 HOXB6P17509 224 aaKnown RBP15.47■□□□□ 0.07
LIME1-202ENST00000444951 CBLP22681 906 aa15.47■□□□□ 0.07
LIME1-202ENST00000444951 PTGS2P35354 604 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms