RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 SIRT6Q8N6T7 355 aa17.22■□□□□ 0.35
SEMA3D-202ENST00000444867 OR51G2Q8NGK0 314 aa17.22■□□□□ 0.35
SEMA3D-202ENST00000444867 OR5W2Q8NH69 310 aa17.22■□□□□ 0.35
SEMA3D-202ENST00000444867 KISS1RQ969F8 398 aaPredicted RBP17.22■□□□□ 0.35
SEMA3D-202ENST00000444867 TEAD3Q99594 435 aa17.22■□□□□ 0.35
SEMA3D-202ENST00000444867 SPSB2Q99619 263 aa17.22■□□□□ 0.35
SEMA3D-202ENST00000444867 LPAR4Q99677 370 aa17.22■□□□□ 0.35
SEMA3D-202ENST00000444867 NDEL1Q9GZM8 345 aa17.22■□□□□ 0.35
SEMA3D-202ENST00000444867 MED20Q9H944 212 aa17.22■□□□□ 0.35
SEMA3D-202ENST00000444867 WDR54Q9H977 334 aa17.22■□□□□ 0.35
SEMA3D-202ENST00000444867 APMAPQ9HDC9 416 aa17.22■□□□□ 0.35
SEMA3D-202ENST00000444867 EXOSC4Q9NPD3 245 aaKnown RBP17.22■□□□□ 0.35
SEMA3D-202ENST00000444867 NXT1Q9UKK6 140 aaKnown RBP17.22■□□□□ 0.35
SEMA3D-202ENST00000444867 SLC6A5Q9Y345 797 aa17.22■□□□□ 0.35
SEMA3D-202ENST00000444867 IGHV3-20A0A0C4DH32 117 aa17.21■□□□□ 0.35
SEMA3D-202ENST00000444867 MEN1O00255 615 aa17.21■□□□□ 0.35
SEMA3D-202ENST00000444867 AKAP8O43823 692 aaKnown RBP17.21■□□□□ 0.35
SEMA3D-202ENST00000444867 GP1BAP07359 652 aa17.21■□□□□ 0.35
SEMA3D-202ENST00000444867 NAGAP17050 411 aa17.21■□□□□ 0.35
SEMA3D-202ENST00000444867 EVI2BP34910 448 aa17.21■□□□□ 0.35
SEMA3D-202ENST00000444867 BDH1Q02338 343 aa17.21■□□□□ 0.35
SEMA3D-202ENST00000444867 CBFBQ13951 182 aa17.21■□□□□ 0.35
SEMA3D-202ENST00000444867 KLHL12Q53G59 568 aa17.21■□□□□ 0.35
SEMA3D-202ENST00000444867 MRPL14Q6P1L8 145 aaKnown RBP17.21■□□□□ 0.35
SEMA3D-202ENST00000444867 TMPRSS11AQ6ZMR5 421 aa17.21■□□□□ 0.35
SEMA3D-202ENST00000444867 CPEB2Q7Z5Q1 589 aaKnown RBP17.21■□□□□ 0.35
SEMA3D-202ENST00000444867 MARCH3Q86UD3 253 aa17.21■□□□□ 0.35
SEMA3D-202ENST00000444867 OR5L2Q8NGL0 311 aa17.21■□□□□ 0.35
SEMA3D-202ENST00000444867 GATAD2BQ8WXI9 593 aa17.21■□□□□ 0.35
SEMA3D-202ENST00000444867 TM9SF4Q92544 642 aa17.21■□□□□ 0.35
SEMA3D-202ENST00000444867 CRB3Q9BUF7 120 aa17.21■□□□□ 0.35
SEMA3D-202ENST00000444867 HCAR1Q9BXC0 346 aa17.21■□□□□ 0.35
SEMA3D-202ENST00000444867 RNF167Q9H6Y7 350 aa17.21■□□□□ 0.35
SEMA3D-202ENST00000444867 HIF3AQ9Y2N7 669 aa17.21■□□□□ 0.35
SEMA3D-202ENST00000444867 PCDHGB6Q9Y5F9 930 aa17.21■□□□□ 0.35
SEMA3D-202ENST00000444867 PCDHGB2Q9Y5G2 931 aa17.21■□□□□ 0.35
SEMA3D-202ENST00000444867 NPFFR2Q9Y5X5 522 aa17.21■□□□□ 0.35
SEMA3D-202ENST00000444867 MCIDASD6RGH6 385 aa17.21■□□□□ 0.35
SEMA3D-202ENST00000444867 ZNF670-ZNF695F2Z2N8 137 aa17.21■□□□□ 0.35
SEMA3D-202ENST00000444867 APEHP13798 732 aaKnown RBP17.21■□□□□ 0.35
SEMA3D-202ENST00000444867 MST1P26927 711 aa17.21■□□□□ 0.35
SEMA3D-202ENST00000444867 TACR3P29371 465 aa17.21■□□□□ 0.35
SEMA3D-202ENST00000444867 RPL4P36578 427 aaKnown RBP17.21■□□□□ 0.35
SEMA3D-202ENST00000444867 P2RX1P51575 399 aa17.21■□□□□ 0.35
SEMA3D-202ENST00000444867 SLC26A5P58743 744 aa17.21■□□□□ 0.35
SEMA3D-202ENST00000444867 DESI1Q6ICB0 168 aa17.21■□□□□ 0.35
SEMA3D-202ENST00000444867 LRRC17Q8N6Y2 441 aa17.21■□□□□ 0.35
SEMA3D-202ENST00000444867 BMPERQ8N8U9 685 aa17.21■□□□□ 0.35
SEMA3D-202ENST00000444867 RNF31Q96EP0 1072 aa17.21■□□□□ 0.35
SEMA3D-202ENST00000444867 WDR77Q9BQA1 342 aaPredicted RBP17.21■□□□□ 0.35
SEMA3D-202ENST00000444867 CDADC1Q9BWV3 514 aa17.21■□□□□ 0.35
SEMA3D-202ENST00000444867 ASPNQ9BXN1 380 aa17.21■□□□□ 0.35
SEMA3D-202ENST00000444867 RTN4RQ9BZR6 473 aa17.21■□□□□ 0.35
SEMA3D-202ENST00000444867 OCEL1Q9H607 264 aa17.21■□□□□ 0.35
SEMA3D-202ENST00000444867 MMP25Q9NPA2 562 aa17.21■□□□□ 0.35
SEMA3D-202ENST00000444867 NRIP3Q9NQ35 241 aa17.21■□□□□ 0.35
SEMA3D-202ENST00000444867 CORINQ9Y5Q5 1042 aa17.21■□□□□ 0.35
SEMA3D-202ENST00000444867 USP34Q70CQ2 3546 aa17.2■□□□□ 0.34
SEMA3D-202ENST00000444867 A0A1B0GVG6 124 aa17.2■□□□□ 0.34
SEMA3D-202ENST00000444867 SLC30A4O14863 429 aa17.2■□□□□ 0.34
SEMA3D-202ENST00000444867 SP9P0CG40 484 aa17.2■□□□□ 0.34
SEMA3D-202ENST00000444867 GP1BBP13224 206 aa17.2■□□□□ 0.34
SEMA3D-202ENST00000444867 GABRA5P31644 462 aa17.2■□□□□ 0.34
SEMA3D-202ENST00000444867 IDUAP35475 653 aa17.2■□□□□ 0.34
SEMA3D-202ENST00000444867 CAPZA2P47755 286 aa17.2■□□□□ 0.34
SEMA3D-202ENST00000444867 RPS7P62081 194 aaKnown RBP17.2■□□□□ 0.34
SEMA3D-202ENST00000444867 MC2RQ01718 297 aa17.2■□□□□ 0.34
SEMA3D-202ENST00000444867 LCN1P1Q5VSP4 162 aa17.2■□□□□ 0.34
SEMA3D-202ENST00000444867 TUBA3EQ6PEY2 450 aa17.2■□□□□ 0.34
SEMA3D-202ENST00000444867 ZNF322Q6U7Q0 402 aaPredicted RBP17.2■□□□□ 0.34
SEMA3D-202ENST00000444867 MFSD4AQ8N468 514 aa17.2■□□□□ 0.34
SEMA3D-202ENST00000444867 FAM98AQ8NCA5 519 aaKnown RBP17.2■□□□□ 0.34
SEMA3D-202ENST00000444867 OR52E2Q8NGJ4 325 aa17.2■□□□□ 0.34
SEMA3D-202ENST00000444867 LOXL4Q96JB6 756 aa17.2■□□□□ 0.34
SEMA3D-202ENST00000444867 COQ7Q99807 217 aa17.2■□□□□ 0.34
SEMA3D-202ENST00000444867 OR51V1Q9H2C8 321 aa17.2■□□□□ 0.34
SEMA3D-202ENST00000444867 NANSQ9NR45 359 aa17.2■□□□□ 0.34
SEMA3D-202ENST00000444867 SF3B6Q9Y3B4 125 aaKnown RBP17.2■□□□□ 0.34
SEMA3D-202ENST00000444867 IER3IP1Q9Y5U9 82 aa17.2■□□□□ 0.34
SEMA3D-202ENST00000444867 MPDZO75970 2070 aa17.2■□□□□ 0.34
SEMA3D-202ENST00000444867 C12orf71A8MTZ7 269 aa17.19■□□□□ 0.34
SEMA3D-202ENST00000444867 LRRN3E7EW58 273 aa17.19■□□□□ 0.34
SEMA3D-202ENST00000444867 AGRPO00253 132 aa17.19■□□□□ 0.34
SEMA3D-202ENST00000444867 IMPA2O14732 288 aa17.19■□□□□ 0.34
SEMA3D-202ENST00000444867 LDOC1O95751 146 aaPredicted RBP17.19■□□□□ 0.34
SEMA3D-202ENST00000444867 BMP4P12644 408 aa17.19■□□□□ 0.34
SEMA3D-202ENST00000444867 ACP1P24666 158 aa17.19■□□□□ 0.34
SEMA3D-202ENST00000444867 CXCR1P25024 350 aa17.19■□□□□ 0.34
SEMA3D-202ENST00000444867 ITPKBP27987 946 aa17.19■□□□□ 0.34
SEMA3D-202ENST00000444867 RAB15P59190 212 aa17.19■□□□□ 0.34
SEMA3D-202ENST00000444867 ACTC1P68032 377 aa17.19■□□□□ 0.34
SEMA3D-202ENST00000444867 ACTA1P68133 377 aa17.19■□□□□ 0.34
SEMA3D-202ENST00000444867 EGR4Q05215 589 aa17.19■□□□□ 0.34
SEMA3D-202ENST00000444867 LGALS3BPQ08380 585 aa17.19■□□□□ 0.34
SEMA3D-202ENST00000444867 FCRLBQ6BAA4 426 aa17.19■□□□□ 0.34
SEMA3D-202ENST00000444867 PRR23CQ6ZRP0 262 aa17.19■□□□□ 0.34
SEMA3D-202ENST00000444867 FNDC8Q8TC99 324 aa17.19■□□□□ 0.34
SEMA3D-202ENST00000444867 RXFP3Q9NSD7 469 aa17.19■□□□□ 0.34
SEMA3D-202ENST00000444867 GPN3Q9UHW5 284 aaPredicted RBP17.19■□□□□ 0.34
SEMA3D-202ENST00000444867 PEX16Q9Y5Y5 336 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms