RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 TRBV11-1A0A0K0K1C0 115 aa9.82□□□□□ -0.84
TOP3B-210ENST00000444502 ZNF98A6NK75 572 aa9.82□□□□□ -0.84
TOP3B-210ENST00000444502 FAM171A2A8MVW0 826 aa9.82□□□□□ -0.84
TOP3B-210ENST00000444502 FABP7O15540 132 aa9.82□□□□□ -0.84
TOP3B-210ENST00000444502 P04436 131 aa9.82□□□□□ -0.84
TOP3B-210ENST00000444502 S100A6P06703 90 aa9.82□□□□□ -0.84
TOP3B-210ENST00000444502 DBIP07108 87 aaKnown RBP9.82□□□□□ -0.84
TOP3B-210ENST00000444502 HBQ1P09105 142 aa9.82□□□□□ -0.84
TOP3B-210ENST00000444502 TCN2P20062 427 aa9.82□□□□□ -0.84
TOP3B-210ENST00000444502 HOXC12P31275 282 aa9.82□□□□□ -0.84
TOP3B-210ENST00000444502 MAP2K3P46734 347 aa9.82□□□□□ -0.84
TOP3B-210ENST00000444502 GZMKP49863 264 aa9.82□□□□□ -0.84
TOP3B-210ENST00000444502 LIM2P55344 173 aa9.82□□□□□ -0.84
TOP3B-210ENST00000444502 CAV3P56539 151 aa9.82□□□□□ -0.84
TOP3B-210ENST00000444502 TRA2BP62995 288 aaKnown RBP9.82□□□□□ -0.84
TOP3B-210ENST00000444502 CREB3L2Q70SY1 520 aa9.82□□□□□ -0.84
TOP3B-210ENST00000444502 ADGRF3Q8IZF5 1079 aa9.82□□□□□ -0.84
TOP3B-210ENST00000444502 ZNF676Q8N7Q3 588 aa9.82□□□□□ -0.84
TOP3B-210ENST00000444502 NEIL3Q8TAT5 605 aa9.82□□□□□ -0.84
TOP3B-210ENST00000444502 TMEM234Q8WY98 164 aa9.82□□□□□ -0.84
TOP3B-210ENST00000444502 ELP4Q96EB1 424 aa9.82□□□□□ -0.84
TOP3B-210ENST00000444502 ADAM29Q9UKF5 820 aa9.82□□□□□ -0.84
TOP3B-210ENST00000444502 ALG5Q9Y673 324 aa9.82□□□□□ -0.84
TOP3B-210ENST00000444502 NSG1A0A0A6YYJ2 146 aa9.82□□□□□ -0.84
TOP3B-210ENST00000444502 C2orf72A6NCS6 295 aa9.82□□□□□ -0.84
TOP3B-210ENST00000444502 UNC119BA6NIH7 251 aa9.82□□□□□ -0.84
TOP3B-210ENST00000444502 GYPBP06028 91 aa9.82□□□□□ -0.84
TOP3B-210ENST00000444502 PTPN6P29350 595 aa9.82□□□□□ -0.84
TOP3B-210ENST00000444502 PDX1P52945 283 aa9.82□□□□□ -0.84
TOP3B-210ENST00000444502 TNFRSF17Q02223 184 aa9.82□□□□□ -0.84
TOP3B-210ENST00000444502 SAXO2Q658L1 398 aa9.82□□□□□ -0.84
TOP3B-210ENST00000444502 PGBD2Q6P3X8 592 aa9.82□□□□□ -0.84
TOP3B-210ENST00000444502 FAHD1Q6P587 224 aa9.82□□□□□ -0.84
TOP3B-210ENST00000444502 SLC46A3Q7Z3Q1 461 aa9.82□□□□□ -0.84
TOP3B-210ENST00000444502 CNRIP1Q96F85 164 aaPredicted RBP9.82□□□□□ -0.84
TOP3B-210ENST00000444502 C11orf54Q9H0W9 315 aaPredicted RBP9.82□□□□□ -0.84
TOP3B-210ENST00000444502 ZNF768Q9H5H4 540 aaKnown RBP9.82□□□□□ -0.84
TOP3B-210ENST00000444502 CHMP1AQ9HD42 196 aaPredicted RBP9.82□□□□□ -0.84
TOP3B-210ENST00000444502 NPAP1Q9NZP6 1156 aa9.82□□□□□ -0.84
TOP3B-210ENST00000444502 SLC17A4Q9Y2C5 497 aa9.82□□□□□ -0.84
TOP3B-210ENST00000444502 ZNF175Q9Y473 711 aa9.82□□□□□ -0.84
TOP3B-210ENST00000444502 MAB21L2Q9Y586 359 aa9.82□□□□□ -0.84
TOP3B-210ENST00000444502 ZFHX2Q9C0A1 2572 aaPredicted RBP9.81□□□□□ -0.84
TOP3B-210ENST00000444502 IGHV1OR15-9A0A0B4J2B8 117 aa9.81□□□□□ -0.84
TOP3B-210ENST00000444502 M0R233 179 aa9.81□□□□□ -0.84
TOP3B-210ENST00000444502 RFPL3O75679 317 aa9.81□□□□□ -0.84
TOP3B-210ENST00000444502 PYCR1P32322 319 aa9.81□□□□□ -0.84
TOP3B-210ENST00000444502 GZMMP51124 257 aa9.81□□□□□ -0.84
TOP3B-210ENST00000444502 DCST2Q5T1A1 773 aa9.81□□□□□ -0.84
TOP3B-210ENST00000444502 SLC48A1Q6P1K1 146 aa9.81□□□□□ -0.84
TOP3B-210ENST00000444502 PAPD4Q6PIY7 484 aaKnown RBP9.81□□□□□ -0.84
TOP3B-210ENST00000444502 ZNF793Q6ZN11 406 aa9.81□□□□□ -0.84
TOP3B-210ENST00000444502 ATCAYQ86WG3 371 aa9.81□□□□□ -0.84
TOP3B-210ENST00000444502 ADAD1Q96M93 576 aaKnown RBP9.81□□□□□ -0.84
TOP3B-210ENST00000444502 A4GALTQ9NPC4 353 aa9.81□□□□□ -0.84
TOP3B-210ENST00000444502 ZNF226Q9NYT6 803 aa9.81□□□□□ -0.84
TOP3B-210ENST00000444502 STUB1Q9UNE7 303 aa9.81□□□□□ -0.84
TOP3B-210ENST00000444502 COPS3Q9UNS2 423 aa9.81□□□□□ -0.84
TOP3B-210ENST00000444502 KCNE3Q9Y6H6 103 aa9.81□□□□□ -0.84
TOP3B-210ENST00000444502 CHD5Q8TDI0 1954 aa9.81□□□□□ -0.84
TOP3B-210ENST00000444502 PROM1O43490 865 aa9.81□□□□□ -0.84
TOP3B-210ENST00000444502 HTR1AP08908 422 aa9.81□□□□□ -0.84
TOP3B-210ENST00000444502 MAP2K6P52564 334 aa9.81□□□□□ -0.84
TOP3B-210ENST00000444502 ILKQ13418 452 aa9.81□□□□□ -0.84
TOP3B-210ENST00000444502 FGL2Q14314 439 aa9.81□□□□□ -0.84
TOP3B-210ENST00000444502 SEC23BQ15437 767 aa9.81□□□□□ -0.84
TOP3B-210ENST00000444502 TRMT12Q53H54 448 aaKnown RBP9.81□□□□□ -0.84
TOP3B-210ENST00000444502 TMEM81Q6P7N7 255 aa9.81□□□□□ -0.84
TOP3B-210ENST00000444502 RNF165Q6ZSG1 346 aa9.81□□□□□ -0.84
TOP3B-210ENST00000444502 STX12Q86Y82 276 aa9.81□□□□□ -0.84
TOP3B-210ENST00000444502 LAX1Q8IWV1 398 aa9.81□□□□□ -0.84
TOP3B-210ENST00000444502 OR4K13Q8NH42 304 aa9.81□□□□□ -0.84
TOP3B-210ENST00000444502 IFI44Q8TCB0 444 aa9.81□□□□□ -0.84
TOP3B-210ENST00000444502 CCDC32Q9BV29 185 aa9.81□□□□□ -0.84
TOP3B-210ENST00000444502 PITHD1Q9GZP4 211 aaPredicted RBP9.81□□□□□ -0.84
TOP3B-210ENST00000444502 GABARAPL1Q9H0R8 117 aa9.81□□□□□ -0.84
TOP3B-210ENST00000444502 MED20Q9H944 212 aa9.81□□□□□ -0.84
TOP3B-210ENST00000444502 EXOSC1Q9Y3B2 195 aaKnown RBP9.81□□□□□ -0.84
TOP3B-210ENST00000444502 CMAHPQ9Y471 501 aa9.81□□□□□ -0.84
TOP3B-210ENST00000444502 PRKYO43930 277 aa9.81□□□□□ -0.84
TOP3B-210ENST00000444502 ZNF254O75437 659 aa9.81□□□□□ -0.84
TOP3B-210ENST00000444502 DHFRP00374 187 aa9.81□□□□□ -0.84
TOP3B-210ENST00000444502 SOD1P00441 154 aa9.81□□□□□ -0.84
TOP3B-210ENST00000444502 CHRM4P08173 479 aa9.81□□□□□ -0.84
TOP3B-210ENST00000444502 PPP1CAP62136 330 aa9.81□□□□□ -0.84
TOP3B-210ENST00000444502 DCAF12Q5T6F0 453 aa9.81□□□□□ -0.84
TOP3B-210ENST00000444502 ACSM5Q6NUN0 579 aa9.81□□□□□ -0.84
TOP3B-210ENST00000444502 ZER1Q7Z7L7 766 aa9.81□□□□□ -0.84
TOP3B-210ENST00000444502 NKAIN4Q8IVV8 208 aa9.81□□□□□ -0.84
TOP3B-210ENST00000444502 PIAS4Q8N2W9 510 aaPredicted RBP9.81□□□□□ -0.84
TOP3B-210ENST00000444502 OR6N2Q8NGY6 317 aa9.81□□□□□ -0.84
TOP3B-210ENST00000444502 OR2AJ1Q8NGZ0 328 aa9.81□□□□□ -0.84
TOP3B-210ENST00000444502 OR14L1PQ8NHC6 308 aa9.81□□□□□ -0.84
TOP3B-210ENST00000444502 RBPMSQ93062 196 aaKnown RBP9.81□□□□□ -0.84
TOP3B-210ENST00000444502 C8orf44Q96CB5 159 aa9.81□□□□□ -0.84
TOP3B-210ENST00000444502 MSLNLQ96KJ4 702 aa9.81□□□□□ -0.84
TOP3B-210ENST00000444502 WDR77Q9BQA1 342 aaPredicted RBP9.81□□□□□ -0.84
TOP3B-210ENST00000444502 NUDT22Q9BRQ3 303 aa9.81□□□□□ -0.84
TOP3B-210ENST00000444502 DDX31Q9H8H2 851 aaKnown RBP9.81□□□□□ -0.84
TOP3B-210ENST00000444502 LIN7BQ9HAP6 207 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms