RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 RAD21L1Q9H4I0 556 aa9.62□□□□□ -0.87
SF3A1-203ENST00000444440 IKZF5Q9H5V7 419 aa9.62□□□□□ -0.87
SF3A1-203ENST00000444440 MTHFD2LQ9H903 347 aaPredicted RBP9.62□□□□□ -0.87
SF3A1-203ENST00000444440 SERINC1Q9NRX5 453 aa9.62□□□□□ -0.87
SF3A1-203ENST00000444440 BEX4Q9NWD9 120 aaPredicted RBP9.62□□□□□ -0.87
SF3A1-203ENST00000444440 THUMPD1Q9NXG2 353 aaKnown RBP9.62□□□□□ -0.87
SF3A1-203ENST00000444440 P2RX2Q9UBL9 471 aa9.62□□□□□ -0.87
SF3A1-203ENST00000444440 ZNF443Q9Y2A4 671 aaPredicted RBP9.62□□□□□ -0.87
SF3A1-203ENST00000444440 IGKV3D-15A0A087WSY6 115 aa9.61□□□□□ -0.87
SF3A1-203ENST00000444440 TRBV5-3A0A0A0MS03 114 aa9.61□□□□□ -0.87
SF3A1-203ENST00000444440 TMEM247A6NEH6 219 aa9.61□□□□□ -0.87
SF3A1-203ENST00000444440 ZNF724A8MTY0 619 aa9.61□□□□□ -0.87
SF3A1-203ENST00000444440 FAAHO00519 579 aa9.61□□□□□ -0.87
SF3A1-203ENST00000444440 FRS3O43559 492 aa9.61□□□□□ -0.87
SF3A1-203ENST00000444440 TROVE2P10155 538 aaKnown RBP eCLIP9.61□□□□□ -0.87
SF3A1-203ENST00000444440 PPP3CBP16298 524 aa9.61□□□□□ -0.87
SF3A1-203ENST00000444440 NCF2P19878 526 aaPredicted RBP9.61□□□□□ -0.87
SF3A1-203ENST00000444440 COX5AP20674 150 aa9.61□□□□□ -0.87
SF3A1-203ENST00000444440 OR2B6P58173 313 aa9.61□□□□□ -0.87
SF3A1-203ENST00000444440 NKX6-1P78426 367 aaPredicted RBP9.61□□□□□ -0.87
SF3A1-203ENST00000444440 H3F3AP84243 136 aa9.61□□□□□ -0.87
SF3A1-203ENST00000444440 BNIP2Q12982 314 aa9.61□□□□□ -0.87
SF3A1-203ENST00000444440 GNA13Q14344 377 aa9.61□□□□□ -0.87
SF3A1-203ENST00000444440 SQLEQ14534 574 aa9.61□□□□□ -0.87
SF3A1-203ENST00000444440 RGNQ15493 299 aa9.61□□□□□ -0.87
SF3A1-203ENST00000444440 AGKQ53H12 422 aa9.61□□□□□ -0.87
SF3A1-203ENST00000444440 BEX5Q5H9J7 111 aa9.61□□□□□ -0.87
SF3A1-203ENST00000444440 C6orf10Q5SRN2 563 aa9.61□□□□□ -0.87
SF3A1-203ENST00000444440 METTL21CQ5VZV1 264 aa9.61□□□□□ -0.87
SF3A1-203ENST00000444440 BLOC1S3Q6QNY0 202 aa9.61□□□□□ -0.87
SF3A1-203ENST00000444440 Q6ZT83 130 aa9.61□□□□□ -0.87
SF3A1-203ENST00000444440 SERPINA11Q86U17 422 aa9.61□□□□□ -0.87
SF3A1-203ENST00000444440 CIARTQ8N365 385 aaPredicted RBP9.61□□□□□ -0.87
SF3A1-203ENST00000444440 SLC25A43Q8WUT9 341 aaPredicted RBP9.61□□□□□ -0.87
SF3A1-203ENST00000444440 CCL19Q99731 98 aa9.61□□□□□ -0.87
SF3A1-203ENST00000444440 OR10A4Q9H209 315 aa9.61□□□□□ -0.87
SF3A1-203ENST00000444440 NPHS2Q9NP85 383 aa9.61□□□□□ -0.87
SF3A1-203ENST00000444440 MRGBPQ9NV56 204 aa9.61□□□□□ -0.87
SF3A1-203ENST00000444440 NPAP1Q9NZP6 1156 aa9.61□□□□□ -0.87
SF3A1-203ENST00000444440 CALML5Q9NZT1 146 aa9.61□□□□□ -0.87
SF3A1-203ENST00000444440 VAPAQ9P0L0 249 aa9.61□□□□□ -0.87
SF3A1-203ENST00000444440 NIPBLQ6KC79 2804 aaeCLIP9.61□□□□□ -0.87
SF3A1-203ENST00000444440 ARFGEF3Q5TH69 2177 aa9.61□□□□□ -0.87
SF3A1-203ENST00000444440 CUBNO60494 3623 aa9.61□□□□□ -0.87
SF3A1-203ENST00000444440 ALPK2Q86TB3 2170 aa9.6□□□□□ -0.87
SF3A1-203ENST00000444440 A0A096LPI6 279 aa9.6□□□□□ -0.87
SF3A1-203ENST00000444440 CFAP73A6NFT4 308 aa9.6□□□□□ -0.87
SF3A1-203ENST00000444440 CLIC1O00299 241 aa9.6□□□□□ -0.87
SF3A1-203ENST00000444440 NR5A2O00482 541 aa9.6□□□□□ -0.87
SF3A1-203ENST00000444440 VIMP08670 466 aaKnown RBP9.6□□□□□ -0.87
SF3A1-203ENST00000444440 BMP2P12643 396 aa9.6□□□□□ -0.87
SF3A1-203ENST00000444440 FPR1P21462 350 aa9.6□□□□□ -0.87
SF3A1-203ENST00000444440 ADSLP30566 484 aaPredicted RBP9.6□□□□□ -0.87
SF3A1-203ENST00000444440 SLC1A3P43003 542 aa9.6□□□□□ -0.87
SF3A1-203ENST00000444440 POLR2HP52434 150 aaKnown RBP9.6□□□□□ -0.87
SF3A1-203ENST00000444440 CRISP3P54108 245 aa9.6□□□□□ -0.87
SF3A1-203ENST00000444440 RIPPLY3P57055 190 aa9.6□□□□□ -0.87
SF3A1-203ENST00000444440 CSNK2A1P68400 391 aaPredicted RBP9.6□□□□□ -0.87
SF3A1-203ENST00000444440 HOXC5Q00444 222 aa9.6□□□□□ -0.87
SF3A1-203ENST00000444440 ITGADQ13349 1161 aa9.6□□□□□ -0.87
SF3A1-203ENST00000444440 Q5PR19 223 aa9.6□□□□□ -0.87
SF3A1-203ENST00000444440 NCMAPQ5T1S8 102 aa9.6□□□□□ -0.87
SF3A1-203ENST00000444440 LRIF1Q5T3J3 769 aa9.6□□□□□ -0.87
SF3A1-203ENST00000444440 BHLHA15Q7RTS1 189 aaPredicted RBP9.6□□□□□ -0.87
SF3A1-203ENST00000444440 PEX5LQ8IYB4 626 aa9.6□□□□□ -0.87
SF3A1-203ENST00000444440 STEAP2Q8NFT2 490 aa9.6□□□□□ -0.87
SF3A1-203ENST00000444440 KBTBD8Q8NFY9 601 aa9.6□□□□□ -0.87
SF3A1-203ENST00000444440 KISS1RQ969F8 398 aaPredicted RBP9.6□□□□□ -0.87
SF3A1-203ENST00000444440 SPDL1Q96EA4 605 aa9.6□□□□□ -0.87
SF3A1-203ENST00000444440 PERPQ96FX8 193 aa9.6□□□□□ -0.87
SF3A1-203ENST00000444440 ZNF385DQ9H6B1 395 aa9.6□□□□□ -0.87
SF3A1-203ENST00000444440 CACYBPQ9HB71 228 aaKnown RBP9.6□□□□□ -0.87
SF3A1-203ENST00000444440 CCDC167Q9P0B6 97 aa9.6□□□□□ -0.87
SF3A1-203ENST00000444440 TMEM181Q9P2C4 612 aa9.6□□□□□ -0.87
SF3A1-203ENST00000444440 DCTN4Q9UJW0 460 aa9.6□□□□□ -0.87
SF3A1-203ENST00000444440 EDARQ9UNE0 448 aa9.6□□□□□ -0.87
SF3A1-203ENST00000444440 HDGFL3Q9Y3E1 203 aa9.6□□□□□ -0.87
SF3A1-203ENST00000444440 A0A0G2JND7 137 aa9.59□□□□□ -0.87
SF3A1-203ENST00000444440 A0A1W2PR80 420 aa9.59□□□□□ -0.87
SF3A1-203ENST00000444440 DPRXA6NFQ7 191 aa9.59□□□□□ -0.87
SF3A1-203ENST00000444440 HS3ST1O14792 307 aa9.59□□□□□ -0.87
SF3A1-203ENST00000444440 ZNF208O43345 1280 aa9.59□□□□□ -0.87
SF3A1-203ENST00000444440 THBS1P07996 1170 aa9.59□□□□□ -0.87
SF3A1-203ENST00000444440 ITGA5P08648 1049 aa9.59□□□□□ -0.87
SF3A1-203ENST00000444440 ARAFP10398 606 aa9.59□□□□□ -0.87
SF3A1-203ENST00000444440 PPIBP23284 216 aaKnown RBP9.59□□□□□ -0.87
SF3A1-203ENST00000444440 IL32P24001 234 aa9.59□□□□□ -0.87
SF3A1-203ENST00000444440 P2RY4P51582 365 aa9.59□□□□□ -0.87
SF3A1-203ENST00000444440 SLC16A1P53985 500 aa9.59□□□□□ -0.87
SF3A1-203ENST00000444440 PDK3Q15120 406 aa9.59□□□□□ -0.87
SF3A1-203ENST00000444440 STK11Q15831 433 aa9.59□□□□□ -0.87
SF3A1-203ENST00000444440 GLIPR1L2Q4G1C9 344 aa9.59□□□□□ -0.87
SF3A1-203ENST00000444440 LIN52Q52LA3 116 aa9.59□□□□□ -0.87
SF3A1-203ENST00000444440 RNF220Q5VTB9 566 aa9.59□□□□□ -0.87
SF3A1-203ENST00000444440 GALNT5Q7Z7M9 940 aa9.59□□□□□ -0.87
SF3A1-203ENST00000444440 CADM2Q8N3J6 435 aa9.59□□□□□ -0.87
SF3A1-203ENST00000444440 ZNF433Q8N7K0 673 aaPredicted RBP9.59□□□□□ -0.87
SF3A1-203ENST00000444440 TMEM99Q8N816 258 aa9.59□□□□□ -0.87
SF3A1-203ENST00000444440 OR52E4Q8NGH9 312 aa9.59□□□□□ -0.87
SF3A1-203ENST00000444440 AKAP1Q92667 903 aaKnown RBP eCLIP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms