RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 COMTD1Q86VU5 262 aa13.44□□□□□ -0.26
CSNK1E-210ENST00000442216 MCEMP1Q8IX19 187 aa13.44□□□□□ -0.26
CSNK1E-210ENST00000442216 SMYD1Q8NB12 490 aa13.44□□□□□ -0.26
CSNK1E-210ENST00000442216 OR52E4Q8NGH9 312 aa13.44□□□□□ -0.26
CSNK1E-210ENST00000442216 RNASE6Q93091 150 aaKnown RBP13.44□□□□□ -0.26
CSNK1E-210ENST00000442216 TAMM41Q96BW9 452 aa13.44□□□□□ -0.26
CSNK1E-210ENST00000442216 STARD4Q96DR4 205 aa13.44□□□□□ -0.26
CSNK1E-210ENST00000442216 ZHX1-C8orf76Q96EF9 292 aa13.44□□□□□ -0.26
CSNK1E-210ENST00000442216 ARL5BQ96KC2 179 aa13.44□□□□□ -0.26
CSNK1E-210ENST00000442216 TMEM27Q9HBJ8 222 aa13.44□□□□□ -0.26
CSNK1E-210ENST00000442216 NPDC1Q9NQX5 325 aaPredicted RBP13.44□□□□□ -0.26
CSNK1E-210ENST00000442216 TMEM181Q9P2C4 612 aa13.44□□□□□ -0.26
CSNK1E-210ENST00000442216 EMC9Q9Y3B6 208 aa13.44□□□□□ -0.26
CSNK1E-210ENST00000442216 PKDREJQ9NTG1 2253 aa13.43□□□□□ -0.26
CSNK1E-210ENST00000442216 A8MVM7 634 aa13.43□□□□□ -0.26
CSNK1E-210ENST00000442216 TMEM229AB2RXF0 380 aa13.43□□□□□ -0.26
CSNK1E-210ENST00000442216 NME4O00746 187 aa13.43□□□□□ -0.26
CSNK1E-210ENST00000442216 FLNBO75369 2602 aaKnown RBP13.43□□□□□ -0.26
CSNK1E-210ENST00000442216 UTP20O75691 2785 aaKnown RBP13.43□□□□□ -0.26
CSNK1E-210ENST00000442216 PRKD3O94806 890 aa13.43□□□□□ -0.26
CSNK1E-210ENST00000442216 FESP07332 822 aa13.43□□□□□ -0.26
CSNK1E-210ENST00000442216 PNMTP11086 282 aa13.43□□□□□ -0.26
CSNK1E-210ENST00000442216 COX6B1P14854 86 aa13.43□□□□□ -0.26
CSNK1E-210ENST00000442216 KDELR2P33947 212 aa13.43□□□□□ -0.26
CSNK1E-210ENST00000442216 MNAT1P51948 309 aa13.43□□□□□ -0.26
CSNK1E-210ENST00000442216 CRYBA2P53672 197 aa13.43□□□□□ -0.26
CSNK1E-210ENST00000442216 CTBP2P56545 445 aa13.43□□□□□ -0.26
CSNK1E-210ENST00000442216 PSME3P61289 254 aa13.43□□□□□ -0.26
CSNK1E-210ENST00000442216 SLC35A1P78382 337 aa13.43□□□□□ -0.26
CSNK1E-210ENST00000442216 LIPEQ05469 1076 aa13.43□□□□□ -0.26
CSNK1E-210ENST00000442216 KRT72Q14CN4 511 aa13.43□□□□□ -0.26
CSNK1E-210ENST00000442216 PDK3Q15120 406 aa13.43□□□□□ -0.26
CSNK1E-210ENST00000442216 ULK3Q6PHR2 472 aa13.43□□□□□ -0.26
CSNK1E-210ENST00000442216 C5orf46Q6UWT4 87 aa13.43□□□□□ -0.26
CSNK1E-210ENST00000442216 CNEP1R1Q8N9A8 125 aa13.43□□□□□ -0.26
CSNK1E-210ENST00000442216 GPR32P1Q8NGA4 272 aa13.43□□□□□ -0.26
CSNK1E-210ENST00000442216 OR6K3Q8NGY3 331 aa13.43□□□□□ -0.26
CSNK1E-210ENST00000442216 STK35Q8TDR2 534 aa13.43□□□□□ -0.26
CSNK1E-210ENST00000442216 ROBO4Q8WZ75 1007 aa13.43□□□□□ -0.26
CSNK1E-210ENST00000442216 OR11A1Q9GZK7 315 aa13.43□□□□□ -0.26
CSNK1E-210ENST00000442216 ALG2Q9H553 416 aa13.43□□□□□ -0.26
CSNK1E-210ENST00000442216 SPAG4Q9NPE6 437 aa13.43□□□□□ -0.26
CSNK1E-210ENST00000442216 PLSCR4Q9NRQ2 329 aa13.43□□□□□ -0.26
CSNK1E-210ENST00000442216 NDE1Q9NXR1 346 aa13.43□□□□□ -0.26
CSNK1E-210ENST00000442216 KLHL9Q9P2J3 617 aa13.43□□□□□ -0.26
CSNK1E-210ENST00000442216 BAG5Q9UL15 447 aa13.43□□□□□ -0.26
CSNK1E-210ENST00000442216 A8MXE2 369 aa13.42□□□□□ -0.26
CSNK1E-210ENST00000442216 EEF1E1-BLOC1S5C9J1V9 151 aa13.42□□□□□ -0.26
CSNK1E-210ENST00000442216 SMAD9O15198 467 aaKnown RBP13.42□□□□□ -0.26
CSNK1E-210ENST00000442216 EEF1E1O43324 174 aaKnown RBP13.42□□□□□ -0.26
CSNK1E-210ENST00000442216 EIF1BO60739 113 aaKnown RBP13.42□□□□□ -0.26
CSNK1E-210ENST00000442216 CYTIPO60759 359 aa13.42□□□□□ -0.26
CSNK1E-210ENST00000442216 NPIPB7O75200 414 aa13.42□□□□□ -0.26
CSNK1E-210ENST00000442216 CGAP01215 116 aa13.42□□□□□ -0.26
CSNK1E-210ENST00000442216 CCNA2P20248 432 aa13.42□□□□□ -0.26
CSNK1E-210ENST00000442216 HTR2AP28223 471 aa13.42□□□□□ -0.26
CSNK1E-210ENST00000442216 H3F3AP84243 136 aa13.42□□□□□ -0.26
CSNK1E-210ENST00000442216 HOXC5Q00444 222 aa13.42□□□□□ -0.26
CSNK1E-210ENST00000442216 OR1Q1Q15612 314 aa13.42□□□□□ -0.26
CSNK1E-210ENST00000442216 SWT1Q5T5J6 900 aaKnown RBP13.42□□□□□ -0.26
CSNK1E-210ENST00000442216 VWA1Q6PCB0 445 aa13.42□□□□□ -0.26
CSNK1E-210ENST00000442216 ZNF613Q6PF04 617 aa13.42□□□□□ -0.26
CSNK1E-210ENST00000442216 BTLAQ7Z6A9 289 aa13.42□□□□□ -0.26
CSNK1E-210ENST00000442216 KIF18BQ86Y91 864 aa13.42□□□□□ -0.26
CSNK1E-210ENST00000442216 DMRTC2Q8IXT2 367 aaPredicted RBP13.42□□□□□ -0.26
CSNK1E-210ENST00000442216 FITM2Q8N6M3 262 aa13.42□□□□□ -0.26
CSNK1E-210ENST00000442216 PROX1Q92786 737 aa13.42□□□□□ -0.26
CSNK1E-210ENST00000442216 SLC38A4Q969I6 547 aa13.42□□□□□ -0.26
CSNK1E-210ENST00000442216 SLC47A1Q96FL8 570 aa13.42□□□□□ -0.26
CSNK1E-210ENST00000442216 MCHR1Q99705 422 aa13.42□□□□□ -0.26
CSNK1E-210ENST00000442216 BCO1Q9HAY6 547 aa13.42□□□□□ -0.26
CSNK1E-210ENST00000442216 ARL8BQ9NVJ2 186 aa13.42□□□□□ -0.26
CSNK1E-210ENST00000442216 SELENONQ9NZV5 590 aa13.42□□□□□ -0.26
CSNK1E-210ENST00000442216 KLHL13Q9P2N7 655 aa13.42□□□□□ -0.26
CSNK1E-210ENST00000442216 PROCRQ9UNN8 238 aa13.42□□□□□ -0.26
CSNK1E-210ENST00000442216 USP22Q9UPT9 525 aa13.42□□□□□ -0.26
CSNK1E-210ENST00000442216 SLC9A8Q9Y2E8 581 aa13.42□□□□□ -0.26
CSNK1E-210ENST00000442216 FREM1Q5H8C1 2179 aa13.41□□□□□ -0.26
CSNK1E-210ENST00000442216 A0A0B4J2E0 115 aa13.41□□□□□ -0.26
CSNK1E-210ENST00000442216 A0A1B0GWA3 101 aa13.41□□□□□ -0.26
CSNK1E-210ENST00000442216 A0A1B0GX12 115 aa13.41□□□□□ -0.26
CSNK1E-210ENST00000442216 ZC3H12DA2A288 527 aaKnown RBP13.41□□□□□ -0.26
CSNK1E-210ENST00000442216 ELOA3DA6NLF2 546 aaPredicted RBP13.41□□□□□ -0.26
CSNK1E-210ENST00000442216 ZNF724A8MTY0 619 aa13.41□□□□□ -0.26
CSNK1E-210ENST00000442216 TPST2O60704 377 aa13.41□□□□□ -0.26
CSNK1E-210ENST00000442216 GPIP06744 558 aa13.41□□□□□ -0.26
CSNK1E-210ENST00000442216 YES1P07947 543 aa13.41□□□□□ -0.26
CSNK1E-210ENST00000442216 IMPDH2P12268 514 aa13.41□□□□□ -0.26
CSNK1E-210ENST00000442216 AGTR1P30556 359 aa13.41□□□□□ -0.26
CSNK1E-210ENST00000442216 IDUAP35475 653 aa13.41□□□□□ -0.26
CSNK1E-210ENST00000442216 GSK3BP49841 420 aa13.41□□□□□ -0.26
CSNK1E-210ENST00000442216 SIRPAP78324 504 aa13.41□□□□□ -0.26
CSNK1E-210ENST00000442216 SORDQ00796 357 aa13.41□□□□□ -0.26
CSNK1E-210ENST00000442216 ELOA3BQ3SY89 546 aa13.41□□□□□ -0.26
CSNK1E-210ENST00000442216 ALG10BQ5I7T1 473 aa13.41□□□□□ -0.26
CSNK1E-210ENST00000442216 TMEM201Q5SNT2 666 aa13.41□□□□□ -0.26
CSNK1E-210ENST00000442216 HIST2H2BCQ6DN03 193 aa13.41□□□□□ -0.26
CSNK1E-210ENST00000442216 ABLIM2Q6H8Q1 611 aa13.41□□□□□ -0.26
CSNK1E-210ENST00000442216 MEX3BQ6ZN04 569 aaKnown RBP13.41□□□□□ -0.26
CSNK1E-210ENST00000442216 PGAM4Q8N0Y7 254 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms