RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 WFDC8Q8IUA0 241 aa16.75■□□□□ 0.27
HMGB3P22-201ENST00000442010 ZNF440Q8IYI8 595 aa16.75■□□□□ 0.27
HMGB3P22-201ENST00000442010 CLIP4Q8N3C7 705 aa16.75■□□□□ 0.27
HMGB3P22-201ENST00000442010 WFDC11Q8NEX6 87 aa16.75■□□□□ 0.27
HMGB3P22-201ENST00000442010 DNAJA3Q96EY1 480 aa16.75■□□□□ 0.27
HMGB3P22-201ENST00000442010 PLPPR2Q96GM1 343 aa16.75■□□□□ 0.27
HMGB3P22-201ENST00000442010 UBTD1Q9HAC8 227 aa16.75■□□□□ 0.27
HMGB3P22-201ENST00000442010 BCL2L10Q9HD36 194 aa16.75■□□□□ 0.27
HMGB3P22-201ENST00000442010 SLAMF8Q9P0V8 285 aa16.75■□□□□ 0.27
HMGB3P22-201ENST00000442010 TMEM181Q9P2C4 612 aa16.75■□□□□ 0.27
HMGB3P22-201ENST00000442010 ZNF443Q9Y2A4 671 aaPredicted RBP16.75■□□□□ 0.27
HMGB3P22-201ENST00000442010 GMEB1Q9Y692 573 aa16.75■□□□□ 0.27
HMGB3P22-201ENST00000442010 ZC3H12DA2A288 527 aaKnown RBP16.74■□□□□ 0.27
HMGB3P22-201ENST00000442010 CNOT4O95628 575 aaKnown RBP16.74■□□□□ 0.27
HMGB3P22-201ENST00000442010 PLAUP00749 431 aa16.74■□□□□ 0.27
HMGB3P22-201ENST00000442010 CCNA2P20248 432 aa16.74■□□□□ 0.27
HMGB3P22-201ENST00000442010 COX5AP20674 150 aa16.74■□□□□ 0.27
HMGB3P22-201ENST00000442010 FPR1P21462 350 aa16.74■□□□□ 0.27
HMGB3P22-201ENST00000442010 NR1H2P55055 460 aa16.74■□□□□ 0.27
HMGB3P22-201ENST00000442010 RIPPLY3P57055 190 aa16.74■□□□□ 0.27
HMGB3P22-201ENST00000442010 TAB1Q15750 504 aa16.74■□□□□ 0.27
HMGB3P22-201ENST00000442010 PAGE3Q5JUK9 113 aa16.74■□□□□ 0.27
HMGB3P22-201ENST00000442010 PRAMEF8Q5VWM4 474 aa16.74■□□□□ 0.27
HMGB3P22-201ENST00000442010 PRAMEF7Q5VXH5 474 aa16.74■□□□□ 0.27
HMGB3P22-201ENST00000442010 C20orf204Q6ZNR8 217 aa16.74■□□□□ 0.27
HMGB3P22-201ENST00000442010 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.74■□□□□ 0.27
HMGB3P22-201ENST00000442010 LRRC75A-AS1Q8N1F1 130 aa16.74■□□□□ 0.27
HMGB3P22-201ENST00000442010 C10orf111Q8N326 155 aa16.74■□□□□ 0.27
HMGB3P22-201ENST00000442010 CKAP2Q8WWK9 683 aa16.74■□□□□ 0.27
HMGB3P22-201ENST00000442010 STON2Q8WXE9 905 aa16.74■□□□□ 0.27
HMGB3P22-201ENST00000442010 KISS1RQ969F8 398 aaPredicted RBP16.74■□□□□ 0.27
HMGB3P22-201ENST00000442010 PIGTQ969N2 578 aa16.74■□□□□ 0.27
HMGB3P22-201ENST00000442010 SPDL1Q96EA4 605 aa16.74■□□□□ 0.27
HMGB3P22-201ENST00000442010 RSPO3Q9BXY4 272 aaPredicted RBP16.74■□□□□ 0.27
HMGB3P22-201ENST00000442010 A4GALTQ9NPC4 353 aa16.74■□□□□ 0.27
HMGB3P22-201ENST00000442010 INTS9Q9NV88 658 aaKnown RBP16.74■□□□□ 0.27
HMGB3P22-201ENST00000442010 TMEM45AQ9NWC5 275 aa16.74■□□□□ 0.27
HMGB3P22-201ENST00000442010 PLCE1Q9P212 2302 aa16.74■□□□□ 0.27
HMGB3P22-201ENST00000442010 HEATR1Q9H583 2144 aaKnown RBP16.73■□□□□ 0.27
HMGB3P22-201ENST00000442010 TRBV5-3A0A0A0MS03 114 aa16.73■□□□□ 0.27
HMGB3P22-201ENST00000442010 IGHV1-2P23083 117 aa16.73■□□□□ 0.27
HMGB3P22-201ENST00000442010 ATP4BP51164 291 aa16.73■□□□□ 0.27
HMGB3P22-201ENST00000442010 ZSWIM7Q19AV6 140 aa16.73■□□□□ 0.27
HMGB3P22-201ENST00000442010 ZNF704Q6ZNC4 412 aaPredicted RBP16.73■□□□□ 0.27
HMGB3P22-201ENST00000442010 BHLHA15Q7RTS1 189 aaPredicted RBP16.73■□□□□ 0.27
HMGB3P22-201ENST00000442010 CCDC103Q8IW40 242 aa16.73■□□□□ 0.27
HMGB3P22-201ENST00000442010 PIGXQ8TBF5 258 aa16.73■□□□□ 0.27
HMGB3P22-201ENST00000442010 DYDC1Q8WWB3 177 aa16.73■□□□□ 0.27
HMGB3P22-201ENST00000442010 HSD17B8Q92506 261 aa16.73■□□□□ 0.27
HMGB3P22-201ENST00000442010 MAL2Q969L2 176 aa16.73■□□□□ 0.27
HMGB3P22-201ENST00000442010 DDIT4LQ96D03 193 aa16.73■□□□□ 0.27
HMGB3P22-201ENST00000442010 ZHX1-C8orf76Q96EF9 292 aa16.73■□□□□ 0.27
HMGB3P22-201ENST00000442010 MAGEB18Q96M61 343 aa16.73■□□□□ 0.27
HMGB3P22-201ENST00000442010 USB1Q9BQ65 265 aaKnown RBP16.73■□□□□ 0.27
HMGB3P22-201ENST00000442010 SPATA9Q9BWV2 254 aa16.73■□□□□ 0.27
HMGB3P22-201ENST00000442010 RAD21L1Q9H4I0 556 aa16.73■□□□□ 0.27
HMGB3P22-201ENST00000442010 CCDC167Q9P0B6 97 aa16.73■□□□□ 0.27
HMGB3P22-201ENST00000442010 EMC3Q9P0I2 261 aa16.73■□□□□ 0.27
HMGB3P22-201ENST00000442010 NR5A2O00482 541 aa16.72■□□□□ 0.27
HMGB3P22-201ENST00000442010 PGM3O95394 542 aa16.72■□□□□ 0.27
HMGB3P22-201ENST00000442010 PRG2P13727 222 aa16.72■□□□□ 0.27
HMGB3P22-201ENST00000442010 UQCRBP14927 111 aa16.72■□□□□ 0.27
HMGB3P22-201ENST00000442010 IL32P24001 234 aa16.72■□□□□ 0.27
HMGB3P22-201ENST00000442010 OR2B6P58173 313 aa16.72■□□□□ 0.27
HMGB3P22-201ENST00000442010 SLC35A1P78382 337 aa16.72■□□□□ 0.27
HMGB3P22-201ENST00000442010 IRX1P78414 480 aaPredicted RBP16.72■□□□□ 0.27
HMGB3P22-201ENST00000442010 NKX6-1P78426 367 aaPredicted RBP16.72■□□□□ 0.27
HMGB3P22-201ENST00000442010 LARS2Q15031 903 aaKnown RBP16.72■□□□□ 0.27
HMGB3P22-201ENST00000442010 GOLGA6L1Q8N7Z2 621 aa16.72■□□□□ 0.27
HMGB3P22-201ENST00000442010 CCL19Q99731 98 aa16.72■□□□□ 0.27
HMGB3P22-201ENST00000442010 POTEKPQ9BYX7 375 aa16.72■□□□□ 0.27
HMGB3P22-201ENST00000442010 VAPAQ9P0L0 249 aa16.72■□□□□ 0.27
HMGB3P22-201ENST00000442010 TMEM247A6NEH6 219 aa16.71■□□□□ 0.27
HMGB3P22-201ENST00000442010 EIF1BO60739 113 aaKnown RBP16.71■□□□□ 0.27
HMGB3P22-201ENST00000442010 LYZL6O75951 148 aa16.71■□□□□ 0.27
HMGB3P22-201ENST00000442010 SASH3O75995 380 aa16.71■□□□□ 0.27
HMGB3P22-201ENST00000442010 SQLEQ14534 574 aa16.71■□□□□ 0.27
HMGB3P22-201ENST00000442010 NCMAPQ5T1S8 102 aa16.71■□□□□ 0.27
HMGB3P22-201ENST00000442010 SHEQ5VZ18 495 aa16.71■□□□□ 0.27
HMGB3P22-201ENST00000442010 FBXW9Q5XUX1 488 aa16.71■□□□□ 0.27
HMGB3P22-201ENST00000442010 WBP2NLQ6ICG8 309 aa16.71■□□□□ 0.27
HMGB3P22-201ENST00000442010 SERPINA11Q86U17 422 aa16.71■□□□□ 0.27
HMGB3P22-201ENST00000442010 ZNF100Q8IYN0 542 aa16.71■□□□□ 0.27
HMGB3P22-201ENST00000442010 LILRB1Q8NHL6 650 aaPredicted RBP16.71■□□□□ 0.27
HMGB3P22-201ENST00000442010 BBS10Q8TAM1 723 aa16.71■□□□□ 0.27
HMGB3P22-201ENST00000442010 IKZF5Q9H5V7 419 aa16.71■□□□□ 0.27
HMGB3P22-201ENST00000442010 ZNF385DQ9H6B1 395 aa16.71■□□□□ 0.27
HMGB3P22-201ENST00000442010 ARGLU1Q9NWB6 273 aaPredicted RBP16.71■□□□□ 0.27
HMGB3P22-201ENST00000442010 ZNF232Q9UNY5 417 aa16.71■□□□□ 0.27
HMGB3P22-201ENST00000442010 NOSIPQ9Y314 301 aaKnown RBP16.71■□□□□ 0.27
HMGB3P22-201ENST00000442010 IFT52Q9Y366 437 aa16.71■□□□□ 0.27
HMGB3P22-201ENST00000442010 GPR171O14626 319 aa16.7■□□□□ 0.26
HMGB3P22-201ENST00000442010 SMPD2O60906 423 aa16.7■□□□□ 0.26
HMGB3P22-201ENST00000442010 ARAFP10398 606 aa16.7■□□□□ 0.26
HMGB3P22-201ENST00000442010 FOSL1P15407 271 aa16.7■□□□□ 0.26
HMGB3P22-201ENST00000442010 AGKQ53H12 422 aa16.7■□□□□ 0.26
HMGB3P22-201ENST00000442010 ZNF311Q5JNZ3 666 aa16.7■□□□□ 0.26
HMGB3P22-201ENST00000442010 ADAM5Q6NVV9 412 aa16.7■□□□□ 0.26
HMGB3P22-201ENST00000442010 PAQR6Q6TCH4 344 aa16.7■□□□□ 0.26
HMGB3P22-201ENST00000442010 ATG4DQ86TL0 474 aaPredicted RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms