RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 TMEM38AQ9H6F2 299 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 FOLH1BQ9HBA9 442 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 C3orf14Q9HBI5 128 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 A4GALTQ9NPC4 353 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 DDX18Q9NVP1 670 aaKnown RBP4.32□□□□□ -1.72
PTPN4-206ENST00000441089 ACTR3BQ9P1U1 418 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 C3orf18Q9UK00 162 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 AP3M1Q9Y2T2 418 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 SNX13Q9Y5W8 968 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 RAI1Q7Z5J4 1906 aaPredicted RBP4.31□□□□□ -1.72
PTPN4-206ENST00000441089 TRBV23-1A0A0A0MS06 115 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 IGHV1-45A0A0A0MS14 117 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 A0A0G2JNJ9 132 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 CENPVL1A0A0U1RR11 272 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 TCRBV3S1A0A5B6 114 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 PRAMEF25A6NGN4 478 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 SAGE2PA6NJ88 616 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 A8MVJ9 347 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 CDC40O60508 579 aaKnown RBP eCLIP4.31□□□□□ -1.72
PTPN4-206ENST00000441089 ZNF354AO60765 605 aaPredicted RBP4.31□□□□□ -1.72
PTPN4-206ENST00000441089 CIB2O75838 187 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 NKX2-2O95096 273 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 EPPINO95925 133 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 IGKV1D-16P01601 117 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 OPN1SWP03999 348 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 SEMG1P04279 462 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 BCHEP06276 602 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 HEXBP07686 556 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 SP1P08047 785 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 CELA2AP08217 269 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 TNNI3P19429 210 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 AQP1P29972 269 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 KDELR2P33947 212 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 PTH2RP49190 550 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 PRIM2P49643 509 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 KHKP50053 298 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 SLC37A1P57057 533 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 MRPS22P82650 360 aaKnown RBP4.31□□□□□ -1.72
PTPN4-206ENST00000441089 DGCR2P98153 550 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 CDK6Q00534 326 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 SORDQ00796 357 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 RBBP4Q09028 425 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 ZNF155Q12901 538 aaPredicted RBP4.31□□□□□ -1.72
PTPN4-206ENST00000441089 SCARB2Q14108 478 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 FLOT2Q14254 428 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 EBPQ15125 230 aaKnown RBP4.31□□□□□ -1.72
PTPN4-206ENST00000441089 ELAVL1Q15717 326 aaKnown RBP4.31□□□□□ -1.72
PTPN4-206ENST00000441089 NNATQ16517 81 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 MEP1AQ16819 746 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 ACER2Q5QJU3 275 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 SLC25A25Q6KCM7 469 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 ERICH5Q6P6B1 374 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 PAPD4Q6PIY7 484 aaKnown RBP4.31□□□□□ -1.72
PTPN4-206ENST00000441089 ENPP6Q6UWR7 440 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 FRRS1Q6ZNA5 592 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 CCDC80Q76M96 950 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 CPEB2Q7Z5Q1 589 aaKnown RBP4.31□□□□□ -1.72
PTPN4-206ENST00000441089 TSEN54Q7Z6J9 526 aaKnown RBP4.31□□□□□ -1.72
PTPN4-206ENST00000441089 HMGN2P46Q86SG4 172 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 COMTD1Q86VU5 262 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 DHFR2Q86XF0 187 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 LIX1LQ8IVB5 337 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 SLC44A2Q8IWA5 706 aaPredicted RBP4.31□□□□□ -1.72
PTPN4-206ENST00000441089 ZNF441Q8N8Z8 693 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 APCDD1LQ8NCL9 501 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 C11orf65Q8NCR3 313 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 NUDT10Q8NFP7 164 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 GPR32P1Q8NGA4 272 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 OR4N2Q8NGD1 307 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 C16orf52Q8NHV5 167 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 SLC2A12Q8TD20 617 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 SLC38A5Q8WUX1 472 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 XAGE5Q8WWM1 108 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 PYDC1Q8WXC3 89 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 PIK3R3Q92569 461 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 SLC9A6Q92581 669 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 JADE3Q92613 823 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 CDS1Q92903 461 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 NCLNQ969V3 563 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 ADIPOR1Q96A54 375 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 TAMM41Q96BW9 452 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 MOAP1Q96BY2 351 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 ZG16BQ96DA0 208 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 DUS3LQ96G46 650 aaKnown RBP4.31□□□□□ -1.72
PTPN4-206ENST00000441089 NUDT11Q96G61 164 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 RBM18Q96H35 190 aaKnown RBP4.31□□□□□ -1.72
PTPN4-206ENST00000441089 AJUBAQ96IF1 538 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 FBXL20Q96IG2 436 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 LMF2Q9BU23 707 aaKnown RBP4.31□□□□□ -1.72
PTPN4-206ENST00000441089 ACTRT3Q9BYD9 372 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 HES7Q9BYE0 225 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 OR8D2Q9GZM6 311 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 QRSL1Q9H0R6 528 aaKnown RBP4.31□□□□□ -1.72
PTPN4-206ENST00000441089 OR10A5Q9H207 317 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 MUC13Q9H3R2 512 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 PIGUQ9H490 435 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 RAD21L1Q9H4I0 556 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 GORASP2Q9H8Y8 452 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 S100A14Q9HCY8 104 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 FBXO34Q9NWN3 711 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms