RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 GTPBP3Q969Y2 492 aaKnown RBP4.37□□□□□ -1.71
EDEM3-203ENST00000439962 KCTD12Q96CX2 325 aaKnown RBP4.37□□□□□ -1.71
EDEM3-203ENST00000439962 ELP4Q96EB1 424 aa4.37□□□□□ -1.71
EDEM3-203ENST00000439962 ZC3HAV1LQ96H79 300 aaKnown RBP4.37□□□□□ -1.71
EDEM3-203ENST00000439962 HS6ST2Q96MM7 605 aa4.37□□□□□ -1.71
EDEM3-203ENST00000439962 GAL3ST4Q96RP7 486 aa4.37□□□□□ -1.71
EDEM3-203ENST00000439962 UBL7Q96S82 380 aaPredicted RBP4.37□□□□□ -1.71
EDEM3-203ENST00000439962 CNPPD1Q9BV87 410 aa4.37□□□□□ -1.71
EDEM3-203ENST00000439962 TSSK6Q9BXA6 273 aa4.37□□□□□ -1.71
EDEM3-203ENST00000439962 AICDAQ9GZX7 198 aa4.37□□□□□ -1.71
EDEM3-203ENST00000439962 NUAK2Q9H093 628 aa4.37□□□□□ -1.71
EDEM3-203ENST00000439962 DUSP22Q9NRW4 184 aa4.37□□□□□ -1.71
EDEM3-203ENST00000439962 ADAM30Q9UKF2 790 aa4.37□□□□□ -1.71
EDEM3-203ENST00000439962 SPACA6W5XKT8 324 aa4.37□□□□□ -1.71
EDEM3-203ENST00000439962 NUP210LQ5VU65 1888 aa4.37□□□□□ -1.71
EDEM3-203ENST00000439962 SVEP1Q4LDE5 3571 aa4.37□□□□□ -1.71
EDEM3-203ENST00000439962 hCG_2014768A0A024R1R8 64 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 SYNDIG1LA6NDD5 238 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 C21orf140B9A014 251 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.36□□□□□ -1.71
EDEM3-203ENST00000439962 J3KTA2 159 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 AP3D1O14617 1153 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 CYP7B1O75881 506 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 DBIP07108 87 aaKnown RBP4.36□□□□□ -1.71
EDEM3-203ENST00000439962 HBQ1P09105 142 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 OR12D1P0DN82 309 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 MMP11P24347 488 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 RBM34P42696 430 aaKnown RBP4.36□□□□□ -1.71
EDEM3-203ENST00000439962 GAS1P54826 345 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 TAS2R43P59537 309 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 PSPHP78330 225 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 IFITM3Q01628 133 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 Q0VFX4 171 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 GTF3C1Q12789 2109 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 STX4Q12846 297 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 HSPB3Q12988 150 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 ASAH1Q13510 395 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 LARS2Q15031 903 aaKnown RBP4.36□□□□□ -1.71
EDEM3-203ENST00000439962 MED22Q15528 200 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 CLPPQ16740 277 aaPredicted RBP4.36□□□□□ -1.71
EDEM3-203ENST00000439962 TMEM236Q5W0B7 351 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 ZNF385CQ66K41 422 aaPredicted RBP4.36□□□□□ -1.71
EDEM3-203ENST00000439962 SPINK14Q6IE38 97 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 QSOX2Q6ZRP7 698 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 MBOAT2Q6ZWT7 520 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 RNF44Q7L0R7 432 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 ABHD13Q7L211 337 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 RANBP3LQ86VV4 465 aaPredicted RBP4.36□□□□□ -1.71
EDEM3-203ENST00000439962 SLC22A16Q86VW1 577 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 GRAMD2AQ8IUY3 354 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 PHC2Q8IXK0 858 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 PEX5LQ8IYB4 626 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 LRRC25Q8N386 305 aaPredicted RBP4.36□□□□□ -1.71
EDEM3-203ENST00000439962 OR52I1Q8NGK6 324 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 OR52J3Q8NH60 311 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 UFD1Q92890 307 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 RPL3LQ92901 407 aaKnown RBP4.36□□□□□ -1.71
EDEM3-203ENST00000439962 EXOSC8Q96B26 276 aaKnown RBP4.36□□□□□ -1.71
EDEM3-203ENST00000439962 CEP19Q96LK0 163 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 ZNF582Q96NG8 517 aaPredicted RBP4.36□□□□□ -1.71
EDEM3-203ENST00000439962 OR7D2Q96RA2 312 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 ASPNQ9BXN1 380 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 GPR87Q9BY21 358 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 ATP13A2Q9NQ11 1180 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 TEX10Q9NXF1 929 aaPredicted RBP4.36□□□□□ -1.71
EDEM3-203ENST00000439962 STMN3Q9NZ72 180 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 CMAHPQ9Y471 501 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 CDH10Q9Y6N8 788 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 INTS1Q8N201 2190 aaKnown RBP4.36□□□□□ -1.71
EDEM3-203ENST00000439962 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 A0A1W2PR48 441 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 HRKO00198 91 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 WWP2O00308 870 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 DYRK3O43781 588 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 AKAP8O43823 692 aaKnown RBP4.36□□□□□ -1.71
EDEM3-203ENST00000439962 SLC19A2O60779 497 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 AIFM1O95831 613 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 ATP1B1P05026 303 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 CHRM4P08173 479 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 HTR1FP30939 366 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 GALNSP34059 522 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 OMPP47874 163 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 RNF144AP50876 292 aaPredicted RBP4.36□□□□□ -1.71
EDEM3-203ENST00000439962 NR0B1P51843 470 aaKnown RBP4.36□□□□□ -1.71
EDEM3-203ENST00000439962 SKP1P63208 163 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 FUT5Q11128 374 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 POU4F2Q12837 409 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 RUNX2Q13950 521 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 GINS1Q14691 196 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 GANABQ14697 944 aaKnown RBP4.36□□□□□ -1.71
EDEM3-203ENST00000439962 SSPNQ14714 243 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 BCL2A1Q16548 175 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 PLEKHN1Q494U1 663 aaPredicted RBP4.36□□□□□ -1.71
EDEM3-203ENST00000439962 STEAP3Q658P3 488 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 MRPL14Q6P1L8 145 aaKnown RBP4.36□□□□□ -1.71
EDEM3-203ENST00000439962 MZT2AQ6P582 158 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 TNFAIP8L2Q6P589 184 aaPredicted RBP4.36□□□□□ -1.71
EDEM3-203ENST00000439962 PAPD4Q6PIY7 484 aaKnown RBP4.36□□□□□ -1.71
EDEM3-203ENST00000439962 ZNF793Q6ZN11 406 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 DEF8Q6ZN54 512 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms