RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 PACSIN3Q9UKS6 424 aa10.57□□□□□ -0.72
HSPG2-206ENST00000439717 BAG5Q9UL15 447 aa10.57□□□□□ -0.72
HSPG2-206ENST00000439717 EMC9Q9Y3B6 208 aa10.57□□□□□ -0.72
HSPG2-206ENST00000439717 PTPN13Q12923 2485 aa10.57□□□□□ -0.72
HSPG2-206ENST00000439717 A0A1B0GWA3 101 aa10.56□□□□□ -0.72
HSPG2-206ENST00000439717 A8MVM7 634 aa10.56□□□□□ -0.72
HSPG2-206ENST00000439717 EEF1E1-BLOC1S5C9J1V9 151 aa10.56□□□□□ -0.72
HSPG2-206ENST00000439717 C19orf84I3L1E1 186 aa10.56□□□□□ -0.72
HSPG2-206ENST00000439717 MSTNO14793 375 aa10.56□□□□□ -0.72
HSPG2-206ENST00000439717 EEF1E1O43324 174 aaKnown RBP10.56□□□□□ -0.72
HSPG2-206ENST00000439717 PRKD3O94806 890 aa10.56□□□□□ -0.72
HSPG2-206ENST00000439717 FESP07332 822 aa10.56□□□□□ -0.72
HSPG2-206ENST00000439717 CD8BP10966 210 aa10.56□□□□□ -0.72
HSPG2-206ENST00000439717 PNMTP11086 282 aa10.56□□□□□ -0.72
HSPG2-206ENST00000439717 COX6B1P14854 86 aa10.56□□□□□ -0.72
HSPG2-206ENST00000439717 IGFBP2P18065 325 aa10.56□□□□□ -0.72
HSPG2-206ENST00000439717 CCNA2P20248 432 aa10.56□□□□□ -0.72
HSPG2-206ENST00000439717 HTR2AP28223 471 aa10.56□□□□□ -0.72
HSPG2-206ENST00000439717 PEX19P40855 299 aa10.56□□□□□ -0.72
HSPG2-206ENST00000439717 AGFG1P52594 562 aaKnown RBP10.56□□□□□ -0.72
HSPG2-206ENST00000439717 CRYBA2P53672 197 aa10.56□□□□□ -0.72
HSPG2-206ENST00000439717 CTBP2P56545 445 aa10.56□□□□□ -0.72
HSPG2-206ENST00000439717 SLC35A1P78382 337 aa10.56□□□□□ -0.72
HSPG2-206ENST00000439717 ULK3Q6PHR2 472 aa10.56□□□□□ -0.72
HSPG2-206ENST00000439717 FITM2Q8N6M3 262 aa10.56□□□□□ -0.72
HSPG2-206ENST00000439717 STK35Q8TDR2 534 aa10.56□□□□□ -0.72
HSPG2-206ENST00000439717 ROBO4Q8WZ75 1007 aa10.56□□□□□ -0.72
HSPG2-206ENST00000439717 PROX1Q92786 737 aa10.56□□□□□ -0.72
HSPG2-206ENST00000439717 RNASE6Q93091 150 aaKnown RBP10.56□□□□□ -0.72
HSPG2-206ENST00000439717 STARD4Q96DR4 205 aa10.56□□□□□ -0.72
HSPG2-206ENST00000439717 ARL5BQ96KC2 179 aa10.56□□□□□ -0.72
HSPG2-206ENST00000439717 DOCK7Q96N67 2140 aa10.56□□□□□ -0.72
HSPG2-206ENST00000439717 OR11A1Q9GZK7 315 aa10.56□□□□□ -0.72
HSPG2-206ENST00000439717 SLC24A3Q9HC58 644 aa10.56□□□□□ -0.72
HSPG2-206ENST00000439717 NPDC1Q9NQX5 325 aaPredicted RBP10.56□□□□□ -0.72
HSPG2-206ENST00000439717 SELENONQ9NZV5 590 aa10.56□□□□□ -0.72
HSPG2-206ENST00000439717 USP22Q9UPT9 525 aa10.56□□□□□ -0.72
HSPG2-206ENST00000439717 SLC9A8Q9Y2E8 581 aa10.56□□□□□ -0.72
HSPG2-206ENST00000439717 ICE1Q9Y2F5 2266 aa10.56□□□□□ -0.72
HSPG2-206ENST00000439717 PCNX1Q96RV3 2341 aa10.56□□□□□ -0.72
HSPG2-206ENST00000439717 SPTAN1Q13813 2472 aaKnown RBP10.56□□□□□ -0.72
HSPG2-206ENST00000439717 ELOA3DA6NLF2 546 aaPredicted RBP10.55□□□□□ -0.72
HSPG2-206ENST00000439717 A8MXE2 369 aa10.55□□□□□ -0.72
HSPG2-206ENST00000439717 TMEM229AB2RXF0 380 aa10.55□□□□□ -0.72
HSPG2-206ENST00000439717 HNRNPRO43390 633 aaKnown RBP10.55□□□□□ -0.72
HSPG2-206ENST00000439717 TPST2O60704 377 aa10.55□□□□□ -0.72
HSPG2-206ENST00000439717 EIF1BO60739 113 aaKnown RBP10.55□□□□□ -0.72
HSPG2-206ENST00000439717 CYTIPO60759 359 aa10.55□□□□□ -0.72
HSPG2-206ENST00000439717 CGAP01215 116 aa10.55□□□□□ -0.72
HSPG2-206ENST00000439717 IDUAP35475 653 aa10.55□□□□□ -0.72
HSPG2-206ENST00000439717 CPA2P48052 419 aa10.55□□□□□ -0.72
HSPG2-206ENST00000439717 PCYT1AP49585 367 aa10.55□□□□□ -0.72
HSPG2-206ENST00000439717 GSK3BP49841 420 aa10.55□□□□□ -0.72
HSPG2-206ENST00000439717 OR2B6P58173 313 aa10.55□□□□□ -0.72
HSPG2-206ENST00000439717 SIRPAP78324 504 aa10.55□□□□□ -0.72
HSPG2-206ENST00000439717 PDK3Q15120 406 aa10.55□□□□□ -0.72
HSPG2-206ENST00000439717 OR1Q1Q15612 314 aa10.55□□□□□ -0.72
HSPG2-206ENST00000439717 ELOA3BQ3SY89 546 aa10.55□□□□□ -0.72
HSPG2-206ENST00000439717 ALG10BQ5I7T1 473 aa10.55□□□□□ -0.72
HSPG2-206ENST00000439717 SWT1Q5T5J6 900 aaKnown RBP10.55□□□□□ -0.72
HSPG2-206ENST00000439717 ZNF613Q6PF04 617 aa10.55□□□□□ -0.72
HSPG2-206ENST00000439717 C5orf46Q6UWT4 87 aa10.55□□□□□ -0.72
HSPG2-206ENST00000439717 C16orf89Q6UX73 402 aa10.55□□□□□ -0.72
HSPG2-206ENST00000439717 BTLAQ7Z6A9 289 aa10.55□□□□□ -0.72
HSPG2-206ENST00000439717 PGAM4Q8N0Y7 254 aa10.55□□□□□ -0.72
HSPG2-206ENST00000439717 ELOA3Q8NG57 546 aa10.55□□□□□ -0.72
HSPG2-206ENST00000439717 OR6T1Q8NGN1 323 aa10.55□□□□□ -0.72
HSPG2-206ENST00000439717 OR6K3Q8NGY3 331 aa10.55□□□□□ -0.72
HSPG2-206ENST00000439717 BCAS4Q8TDM0 211 aa10.55□□□□□ -0.72
HSPG2-206ENST00000439717 SLC47A1Q96FL8 570 aa10.55□□□□□ -0.72
HSPG2-206ENST00000439717 MCHR1Q99705 422 aa10.55□□□□□ -0.72
HSPG2-206ENST00000439717 KCTD14Q9BQ13 255 aaPredicted RBP10.55□□□□□ -0.72
HSPG2-206ENST00000439717 NAA11Q9BSU3 229 aaPredicted RBP10.55□□□□□ -0.72
HSPG2-206ENST00000439717 PCDHAC1Q9H158 963 aa10.55□□□□□ -0.72
HSPG2-206ENST00000439717 BCO1Q9HAY6 547 aa10.55□□□□□ -0.72
HSPG2-206ENST00000439717 PLSCR4Q9NRQ2 329 aa10.55□□□□□ -0.72
HSPG2-206ENST00000439717 KLHL9Q9P2J3 617 aa10.55□□□□□ -0.72
HSPG2-206ENST00000439717 KLHL13Q9P2N7 655 aa10.55□□□□□ -0.72
HSPG2-206ENST00000439717 PROCRQ9UNN8 238 aa10.55□□□□□ -0.72
HSPG2-206ENST00000439717 HECTD1Q9ULT8 2610 aa10.54□□□□□ -0.72
HSPG2-206ENST00000439717 IGHV3-15A0A0B4J1V0 119 aa10.54□□□□□ -0.72
HSPG2-206ENST00000439717 A0A0B4J2E0 115 aa10.54□□□□□ -0.72
HSPG2-206ENST00000439717 A0A1B0GX12 115 aa10.54□□□□□ -0.72
HSPG2-206ENST00000439717 ZC3H12DA2A288 527 aaKnown RBP10.54□□□□□ -0.72
HSPG2-206ENST00000439717 M0R3H8 397 aa10.54□□□□□ -0.72
HSPG2-206ENST00000439717 CXCR6O00574 342 aa10.54□□□□□ -0.72
HSPG2-206ENST00000439717 SMAD9O15198 467 aaKnown RBP10.54□□□□□ -0.72
HSPG2-206ENST00000439717 GSTA4O15217 222 aa10.54□□□□□ -0.72
HSPG2-206ENST00000439717 NPIPB7O75200 414 aa10.54□□□□□ -0.72
HSPG2-206ENST00000439717 SMNDC1O75940 238 aaKnown RBP eCLIP10.54□□□□□ -0.72
HSPG2-206ENST00000439717 GPIP06744 558 aa10.54□□□□□ -0.72
HSPG2-206ENST00000439717 YES1P07947 543 aa10.54□□□□□ -0.72
HSPG2-206ENST00000439717 IMPDH2P12268 514 aa10.54□□□□□ -0.72
HSPG2-206ENST00000439717 UQCRC1P31930 480 aa10.54□□□□□ -0.72
HSPG2-206ENST00000439717 SELENOWP63302 87 aa10.54□□□□□ -0.72
HSPG2-206ENST00000439717 H3F3AP84243 136 aa10.54□□□□□ -0.72
HSPG2-206ENST00000439717 SORDQ00796 357 aa10.54□□□□□ -0.72
HSPG2-206ENST00000439717 RASGEF1BQ0VAM2 473 aa10.54□□□□□ -0.72
HSPG2-206ENST00000439717 NPTX1Q15818 432 aa10.54□□□□□ -0.72
HSPG2-206ENST00000439717 SPATS1Q496A3 300 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms