RNA–Protein interactions for RNA: ENST00000439106.5

PRAME-209, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 891 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-209ENST00000439106 SERPINA11Q86U17 422 aa12.25□□□□□ -0.45
PRAME-209ENST00000439106 MTDHQ86UE4 582 aaKnown RBP12.25□□□□□ -0.45
PRAME-209ENST00000439106 CKAP2Q8WWK9 683 aa12.25□□□□□ -0.45
PRAME-209ENST00000439106 KISS1RQ969F8 398 aaPredicted RBP12.25□□□□□ -0.45
PRAME-209ENST00000439106 CCL19Q99731 98 aa12.25□□□□□ -0.45
PRAME-209ENST00000439106 IKZF5Q9H5V7 419 aa12.25□□□□□ -0.45
PRAME-209ENST00000439106 ARGLU1Q9NWB6 273 aaPredicted RBP12.25□□□□□ -0.45
PRAME-209ENST00000439106 CALML5Q9NZT1 146 aa12.25□□□□□ -0.45
PRAME-209ENST00000439106 VAPAQ9P0L0 249 aa12.25□□□□□ -0.45
PRAME-209ENST00000439106 ZNF724A8MTY0 619 aa12.24□□□□□ -0.45
PRAME-209ENST00000439106 ADSLP30566 484 aaPredicted RBP12.24□□□□□ -0.45
PRAME-209ENST00000439106 FOXG1P55316 489 aaPredicted RBP12.24□□□□□ -0.45
PRAME-209ENST00000439106 ITGADQ13349 1161 aa12.24□□□□□ -0.45
PRAME-209ENST00000439106 CAPRIN1Q14444 709 aaKnown RBP12.24□□□□□ -0.45
PRAME-209ENST00000439106 LRIF1Q5T3J3 769 aa12.24□□□□□ -0.45
PRAME-209ENST00000439106 SEZ6L2Q6UXD5 910 aa12.24□□□□□ -0.45
PRAME-209ENST00000439106 Q6ZT83 130 aa12.24□□□□□ -0.45
PRAME-209ENST00000439106 BHLHA15Q7RTS1 189 aaPredicted RBP12.24□□□□□ -0.45
PRAME-209ENST00000439106 GALNT5Q7Z7M9 940 aa12.24□□□□□ -0.45
PRAME-209ENST00000439106 COMTD1Q86VU5 262 aa12.24□□□□□ -0.45
PRAME-209ENST00000439106 NAV3Q8IVL0 2385 aa12.24□□□□□ -0.45
PRAME-209ENST00000439106 ZNF100Q8IYN0 542 aa12.24□□□□□ -0.45
PRAME-209ENST00000439106 STEAP2Q8NFT2 490 aa12.24□□□□□ -0.45
PRAME-209ENST00000439106 NFKBIDQ8NI38 313 aa12.24□□□□□ -0.45
PRAME-209ENST00000439106 NEUROG1Q92886 237 aa12.24□□□□□ -0.45
PRAME-209ENST00000439106 DDIT4LQ96D03 193 aa12.24□□□□□ -0.45
PRAME-209ENST00000439106 ZHX1-C8orf76Q96EF9 292 aa12.24□□□□□ -0.45
PRAME-209ENST00000439106 PERPQ96FX8 193 aa12.24□□□□□ -0.45
PRAME-209ENST00000439106 MAGEB18Q96M61 343 aa12.24□□□□□ -0.45
PRAME-209ENST00000439106 TACO1Q9BSH4 297 aaKnown RBP12.24□□□□□ -0.45
PRAME-209ENST00000439106 GSX1Q9H4S2 264 aaPredicted RBP12.24□□□□□ -0.45
PRAME-209ENST00000439106 BEX4Q9NWD9 120 aaPredicted RBP12.24□□□□□ -0.45
PRAME-209ENST00000439106 TMEM181Q9P2C4 612 aa12.24□□□□□ -0.45
PRAME-209ENST00000439106 DCTN4Q9UJW0 460 aa12.24□□□□□ -0.45
PRAME-209ENST00000439106 NOSIPQ9Y314 301 aaKnown RBP12.24□□□□□ -0.45
PRAME-209ENST00000439106 HDGFL3Q9Y3E1 203 aa12.24□□□□□ -0.45
PRAME-209ENST00000439106 NF1P21359 2839 aa12.24□□□□□ -0.45
PRAME-209ENST00000439106 IGKV3D-15A0A087WSY6 115 aa12.23□□□□□ -0.45
PRAME-209ENST00000439106 A0A0G2JPF8 293 aa12.23□□□□□ -0.45
PRAME-209ENST00000439106 TMEM247A6NEH6 219 aa12.23□□□□□ -0.45
PRAME-209ENST00000439106 HNRNPCL2B2RXH8 293 aa12.23□□□□□ -0.45
PRAME-209ENST00000439106 HNRNPCL3B7ZW38 293 aa12.23□□□□□ -0.45
PRAME-209ENST00000439106 FAAHO00519 579 aa12.23□□□□□ -0.45
PRAME-209ENST00000439106 HNRNPCL1O60812 293 aaKnown RBP12.23□□□□□ -0.45
PRAME-209ENST00000439106 RAD51DO75771 328 aa12.23□□□□□ -0.45
PRAME-209ENST00000439106 HNRNPCL4P0DMR1 293 aa12.23□□□□□ -0.45
PRAME-209ENST00000439106 FPR1P21462 350 aa12.23□□□□□ -0.45
PRAME-209ENST00000439106 HOXC12P31275 282 aa12.23□□□□□ -0.45
PRAME-209ENST00000439106 MAGEA8P43361 318 aa12.23□□□□□ -0.45
PRAME-209ENST00000439106 HTR3AP46098 478 aa12.23□□□□□ -0.45
PRAME-209ENST00000439106 NKX6-1P78426 367 aaPredicted RBP12.23□□□□□ -0.45
PRAME-209ENST00000439106 FADDQ13158 208 aa12.23□□□□□ -0.45
PRAME-209ENST00000439106 CEACAM7Q14002 265 aa12.23□□□□□ -0.45
PRAME-209ENST00000439106 SQLEQ14534 574 aa12.23□□□□□ -0.45
PRAME-209ENST00000439106 LARS2Q15031 903 aaKnown RBP12.23□□□□□ -0.45
PRAME-209ENST00000439106 OR7A5Q15622 319 aa12.23□□□□□ -0.45
PRAME-209ENST00000439106 ZNF311Q5JNZ3 666 aa12.23□□□□□ -0.45
PRAME-209ENST00000439106 Q5PR19 223 aa12.23□□□□□ -0.45
PRAME-209ENST00000439106 RNF220Q5VTB9 566 aa12.23□□□□□ -0.45
PRAME-209ENST00000439106 C9orf135Q5VTT2 229 aa12.23□□□□□ -0.45
PRAME-209ENST00000439106 UBE2J2Q8N2K1 259 aa12.23□□□□□ -0.45
PRAME-209ENST00000439106 PIGXQ8TBF5 258 aa12.23□□□□□ -0.45
PRAME-209ENST00000439106 ADAM19Q9H013 955 aa12.23□□□□□ -0.45
PRAME-209ENST00000439106 OR10A4Q9H209 315 aa12.23□□□□□ -0.45
PRAME-209ENST00000439106 VIPAS39Q9H9C1 493 aa12.23□□□□□ -0.45
PRAME-209ENST00000439106 NPHS2Q9NP85 383 aa12.23□□□□□ -0.45
PRAME-209ENST00000439106 A4GALTQ9NPC4 353 aa12.23□□□□□ -0.45
PRAME-209ENST00000439106 CR1P17927 2039 aa12.22□□□□□ -0.45
PRAME-209ENST00000439106 TRBV5-3A0A0A0MS03 114 aa12.22□□□□□ -0.45
PRAME-209ENST00000439106 A0A1W2PR80 420 aa12.22□□□□□ -0.45
PRAME-209ENST00000439106 C5orf58C9J3I9 102 aa12.22□□□□□ -0.45
PRAME-209ENST00000439106 CLOCKO15516 846 aa12.22□□□□□ -0.45
PRAME-209ENST00000439106 ZNF208O43345 1280 aa12.22□□□□□ -0.45
PRAME-209ENST00000439106 SMPD2O60906 423 aa12.22□□□□□ -0.45
PRAME-209ENST00000439106 AKR7A3O95154 331 aa12.22□□□□□ -0.45
PRAME-209ENST00000439106 PGM3O95394 542 aa12.22□□□□□ -0.45
PRAME-209ENST00000439106 THBS1P07996 1170 aa12.22□□□□□ -0.45
PRAME-209ENST00000439106 ARAFP10398 606 aa12.22□□□□□ -0.45
PRAME-209ENST00000439106 BMP2P12643 396 aa12.22□□□□□ -0.45
PRAME-209ENST00000439106 UQCRBP14927 111 aa12.22□□□□□ -0.45
PRAME-209ENST00000439106 NCF2P19878 526 aaPredicted RBP12.22□□□□□ -0.45
PRAME-209ENST00000439106 COX5AP20674 150 aa12.22□□□□□ -0.45
PRAME-209ENST00000439106 CXCR1P25024 350 aa12.22□□□□□ -0.45
PRAME-209ENST00000439106 IDUAP35475 653 aa12.22□□□□□ -0.45
PRAME-209ENST00000439106 NR1H2P55055 460 aa12.22□□□□□ -0.45
PRAME-209ENST00000439106 H3F3AP84243 136 aa12.22□□□□□ -0.45
PRAME-209ENST00000439106 SF3A3Q12874 501 aaKnown RBP eCLIP12.22□□□□□ -0.45
PRAME-209ENST00000439106 GLIPR1L2Q4G1C9 344 aa12.22□□□□□ -0.45
PRAME-209ENST00000439106 GCNT6Q5T4J0 391 aa12.22□□□□□ -0.45
PRAME-209ENST00000439106 WBP2NLQ6ICG8 309 aa12.22□□□□□ -0.45
PRAME-209ENST00000439106 CASP12Q6UXS9 341 aa12.22□□□□□ -0.45
PRAME-209ENST00000439106 ZNF440Q8IYI8 595 aa12.22□□□□□ -0.45
PRAME-209ENST00000439106 TMEM99Q8N816 258 aa12.22□□□□□ -0.45
PRAME-209ENST00000439106 KBTBD8Q8NFY9 601 aa12.22□□□□□ -0.45
PRAME-209ENST00000439106 OR52E4Q8NGH9 312 aa12.22□□□□□ -0.45
PRAME-209ENST00000439106 BBS10Q8TAM1 723 aa12.22□□□□□ -0.45
PRAME-209ENST00000439106 AKAP1Q92667 903 aaKnown RBP eCLIP12.22□□□□□ -0.45
PRAME-209ENST00000439106 PMM1Q92871 262 aa12.22□□□□□ -0.45
PRAME-209ENST00000439106 APH1AQ96BI3 265 aa12.22□□□□□ -0.45
PRAME-209ENST00000439106 C3orf49Q96BT1 292 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms