RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 POU2F1P14859 743 aa2.59□□□□□ -2
TRAPPC13-204ENST00000438419 GNA11P29992 359 aa2.59□□□□□ -2
TRAPPC13-204ENST00000438419 HTR1FP30939 366 aa2.59□□□□□ -2
TRAPPC13-204ENST00000438419 TAGLN2P37802 199 aaKnown RBP2.59□□□□□ -2
TRAPPC13-204ENST00000438419 CEBPDP49716 269 aaPredicted RBP2.59□□□□□ -2
TRAPPC13-204ENST00000438419 HLCSP50747 726 aa2.59□□□□□ -2
TRAPPC13-204ENST00000438419 CHRNB3Q05901 458 aa2.59□□□□□ -2
TRAPPC13-204ENST00000438419 SLC15A2Q16348 729 aa2.59□□□□□ -2
TRAPPC13-204ENST00000438419 SFT2D3Q587I9 215 aa2.59□□□□□ -2
TRAPPC13-204ENST00000438419 UQCC3Q6UW78 93 aa2.59□□□□□ -2
TRAPPC13-204ENST00000438419 ARCQ7LC44 396 aa2.59□□□□□ -2
TRAPPC13-204ENST00000438419 HSD17B13Q7Z5P4 300 aaPredicted RBP2.59□□□□□ -2
TRAPPC13-204ENST00000438419 OR2L13Q8N349 312 aa2.59□□□□□ -2
TRAPPC13-204ENST00000438419 Q8N7P7 452 aa2.59□□□□□ -2
TRAPPC13-204ENST00000438419 CATSPER1Q8NEC5 780 aa2.59□□□□□ -2
TRAPPC13-204ENST00000438419 OR2L5Q8NG80 312 aa2.59□□□□□ -2
TRAPPC13-204ENST00000438419 OR56B4Q8NH76 319 aa2.59□□□□□ -2
TRAPPC13-204ENST00000438419 ZNF564Q8TBZ8 553 aaPredicted RBP2.59□□□□□ -2
TRAPPC13-204ENST00000438419 EFHD2Q96C19 240 aaPredicted RBP2.59□□□□□ -2
TRAPPC13-204ENST00000438419 TCEANC2Q96MN5 208 aa2.59□□□□□ -2
TRAPPC13-204ENST00000438419 SLC38A2Q96QD8 506 aa2.59□□□□□ -2
TRAPPC13-204ENST00000438419 TBX15Q96SF7 602 aa2.59□□□□□ -2
TRAPPC13-204ENST00000438419 GAL3ST1Q99999 423 aa2.59□□□□□ -2
TRAPPC13-204ENST00000438419 ZNF670Q9BS34 389 aa2.59□□□□□ -2
TRAPPC13-204ENST00000438419 RNF126Q9BV68 326 aa2.59□□□□□ -2
TRAPPC13-204ENST00000438419 EHD1Q9H4M9 534 aa2.59□□□□□ -2
TRAPPC13-204ENST00000438419 VCPKMTQ9H867 229 aa2.59□□□□□ -2
TRAPPC13-204ENST00000438419 PDFQ9HBH1 243 aa2.59□□□□□ -2
TRAPPC13-204ENST00000438419 ONECUT1Q9UBC0 465 aa2.59□□□□□ -2
TRAPPC13-204ENST00000438419 ADAM28Q9UKQ2 775 aa2.59□□□□□ -2
TRAPPC13-204ENST00000438419 PRPF19Q9UMS4 504 aaKnown RBP2.59□□□□□ -2
TRAPPC13-204ENST00000438419 ABCG2Q9UNQ0 655 aa2.59□□□□□ -2
TRAPPC13-204ENST00000438419 RRP15Q9Y3B9 282 aaKnown RBP2.59□□□□□ -2
TRAPPC13-204ENST00000438419 IKBKGQ9Y6K9 419 aa2.59□□□□□ -2
TRAPPC13-204ENST00000438419 RLFQ13129 1914 aa2.58□□□□□ -2
TRAPPC13-204ENST00000438419 TTC21BQ7Z4L5 1316 aa2.58□□□□□ -2
TRAPPC13-204ENST00000438419 IGHV1OR15-1A0A075B7D0 117 aa2.58□□□□□ -2
TRAPPC13-204ENST00000438419 TMEM110-MUSTN1A8MSY1 372 aa2.58□□□□□ -2
TRAPPC13-204ENST00000438419 K7N7A8 449 aa2.58□□□□□ -2
TRAPPC13-204ENST00000438419 ZNF264O43296 627 aa2.58□□□□□ -2
TRAPPC13-204ENST00000438419 MED7O43513 233 aa2.58□□□□□ -2
TRAPPC13-204ENST00000438419 TIMM8AO60220 97 aaPredicted RBP2.58□□□□□ -2
TRAPPC13-204ENST00000438419 SNX4O95219 450 aa2.58□□□□□ -2
TRAPPC13-204ENST00000438419 AQP1P29972 269 aa2.58□□□□□ -2
TRAPPC13-204ENST00000438419 PLK1P53350 603 aa2.58□□□□□ -2
TRAPPC13-204ENST00000438419 ATP1B3P54709 279 aa2.58□□□□□ -2
TRAPPC13-204ENST00000438419 PKNOX1P55347 436 aa2.58□□□□□ -2
TRAPPC13-204ENST00000438419 SEC61GP60059 68 aa2.58□□□□□ -2
TRAPPC13-204ENST00000438419 CCDC173Q0VFZ6 552 aa2.58□□□□□ -2
TRAPPC13-204ENST00000438419 DDX39BQ13838 428 aaKnown RBP2.58□□□□□ -2
TRAPPC13-204ENST00000438419 PHYHD1Q5SRE7 291 aa2.58□□□□□ -2
TRAPPC13-204ENST00000438419 DHDDSQ86SQ9 333 aa2.58□□□□□ -2
TRAPPC13-204ENST00000438419 C17orf82Q86X59 251 aaPredicted RBP2.58□□□□□ -2
TRAPPC13-204ENST00000438419 NBPF5PQ86XG9 351 aaPredicted RBP2.58□□□□□ -2
TRAPPC13-204ENST00000438419 LRRC75A-AS1Q8N1F1 130 aa2.58□□□□□ -2
TRAPPC13-204ENST00000438419 SVOPLQ8N434 492 aa2.58□□□□□ -2
TRAPPC13-204ENST00000438419 OR13C2Q8NGS9 318 aa2.58□□□□□ -2
TRAPPC13-204ENST00000438419 ANKRD49Q8WVL7 239 aa2.58□□□□□ -2
TRAPPC13-204ENST00000438419 SCFD1Q8WVM8 642 aa2.58□□□□□ -2
TRAPPC13-204ENST00000438419 FBXO32Q969P5 355 aa2.58□□□□□ -2
TRAPPC13-204ENST00000438419 MARC2Q969Z3 335 aa2.58□□□□□ -2
TRAPPC13-204ENST00000438419 PGLYRP4Q96LB8 373 aa2.58□□□□□ -2
TRAPPC13-204ENST00000438419 COPS8Q99627 209 aa2.58□□□□□ -2
TRAPPC13-204ENST00000438419 ZNF184Q99676 751 aaPredicted RBP2.58□□□□□ -2
TRAPPC13-204ENST00000438419 KLHDC3Q9BQ90 382 aa2.58□□□□□ -2
TRAPPC13-204ENST00000438419 FN3KRPQ9HA64 309 aa2.58□□□□□ -2
TRAPPC13-204ENST00000438419 SGK2Q9HBY8 427 aa2.58□□□□□ -2
TRAPPC13-204ENST00000438419 MCCC2Q9HCC0 563 aa2.58□□□□□ -2
TRAPPC13-204ENST00000438419 ABCB10Q9NRK6 738 aa2.58□□□□□ -2
TRAPPC13-204ENST00000438419 HYPKQ9NX55 129 aa2.58□□□□□ -2
TRAPPC13-204ENST00000438419 NYAP2Q9P242 653 aa2.58□□□□□ -2
TRAPPC13-204ENST00000438419 COPS3Q9UNS2 423 aa2.58□□□□□ -2
TRAPPC13-204ENST00000438419 PHF3Q92576 2039 aaKnown RBP2.57□□□□□ -2
TRAPPC13-204ENST00000438419 PNPLA6Q8IY17 1366 aa2.57□□□□□ -2
TRAPPC13-204ENST00000438419 IGHV7-81A0A0B4J1V7 117 aa2.57□□□□□ -2
TRAPPC13-204ENST00000438419 ARHGEF35A5YM69 484 aa2.57□□□□□ -2
TRAPPC13-204ENST00000438419 BTBD17A6NE02 478 aa2.57□□□□□ -2
TRAPPC13-204ENST00000438419 TRIM64CA6NLI5 447 aa2.57□□□□□ -2
TRAPPC13-204ENST00000438419 IDSB3KWA1 339 aa2.57□□□□□ -2
TRAPPC13-204ENST00000438419 FOXE1O00358 373 aaPredicted RBP2.57□□□□□ -2
TRAPPC13-204ENST00000438419 NBR2O15453 112 aa2.57□□□□□ -2
TRAPPC13-204ENST00000438419 FCMRO60667 390 aa2.57□□□□□ -2
TRAPPC13-204ENST00000438419 ECI2O75521 394 aa2.57□□□□□ -2
TRAPPC13-204ENST00000438419 SERPINA3P01011 423 aa2.57□□□□□ -2
TRAPPC13-204ENST00000438419 SEMG1P04279 462 aa2.57□□□□□ -2
TRAPPC13-204ENST00000438419 CAPN1P07384 714 aa2.57□□□□□ -2
TRAPPC13-204ENST00000438419 COX5AP20674 150 aa2.57□□□□□ -2
TRAPPC13-204ENST00000438419 ATP6V1B2P21281 511 aa2.57□□□□□ -2
TRAPPC13-204ENST00000438419 PBLDP30039 288 aaPredicted RBP2.57□□□□□ -2
TRAPPC13-204ENST00000438419 DRD3P35462 400 aa2.57□□□□□ -2
TRAPPC13-204ENST00000438419 MAP3K8P41279 467 aa2.57□□□□□ -2
TRAPPC13-204ENST00000438419 STX17P56962 302 aa2.57□□□□□ -2
TRAPPC13-204ENST00000438419 GRB7Q14451 532 aa2.57□□□□□ -2
TRAPPC13-204ENST00000438419 ARL6IP1Q15041 203 aa2.57□□□□□ -2
TRAPPC13-204ENST00000438419 KYAT1Q16773 422 aa2.57□□□□□ -2
TRAPPC13-204ENST00000438419 RABL6Q3YEC7 729 aaPredicted RBP2.57□□□□□ -2
TRAPPC13-204ENST00000438419 CFAP221Q4G0U5 840 aa2.57□□□□□ -2
TRAPPC13-204ENST00000438419 KCTD21Q4G0X4 260 aa2.57□□□□□ -2
TRAPPC13-204ENST00000438419 BOLA3Q53S33 107 aa2.57□□□□□ -2
TRAPPC13-204ENST00000438419 OR2A2Q6IF42 318 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms