RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 I3L1I5 382 aaPredicted RBP6.2□□□□□ -1.42
CSDE1-205ENST00000438362 SURF4O15260 269 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 PPM1DO15297 605 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 TBX19O60806 448 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 RAB3DO95716 219 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 SOD1P00441 154 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 H2BFMP0C1H6 154 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 NID1P14543 1247 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 PGCP20142 388 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 NPR2P20594 1047 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 ENDOUP21128 410 aaKnown RBP6.2□□□□□ -1.42
CSDE1-205ENST00000438362 ITGA3P26006 1051 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 CD6P30203 668 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 CCR2P41597 374 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 SRP9P49458 86 aaKnown RBP6.2□□□□□ -1.42
CSDE1-205ENST00000438362 HHEXQ03014 270 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 GRM7Q14831 915 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 OPCMLQ14982 345 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 ARHGAP40Q5TG30 622 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 GPR155Q7Z3F1 870 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 RDH10Q8IZV5 341 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 ZNF615Q8N8J6 731 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 NLGN4YQ8NFZ3 816 aaPredicted RBP6.2□□□□□ -1.42
CSDE1-205ENST00000438362 SLC2A12Q8TD20 617 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 PHYHIPQ92561 330 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 BADQ92934 168 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 CNRIP1Q96F85 164 aaPredicted RBP6.2□□□□□ -1.42
CSDE1-205ENST00000438362 SAMD11Q96NU1 681 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 SDF2Q99470 211 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 FBRSQ9HAH7 460 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 MEPEQ9NQ76 525 aaPredicted RBP6.2□□□□□ -1.42
CSDE1-205ENST00000438362 KCMF1Q9P0J7 381 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 EPHA6Q9UF33 1036 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 ZC3H12DA2A288 527 aaKnown RBP6.2□□□□□ -1.42
CSDE1-205ENST00000438362 SCO2O43819 266 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 SPDEFO95238 335 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 PLGP00747 810 aaPredicted RBP6.2□□□□□ -1.42
CSDE1-205ENST00000438362 C1QCP02747 245 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 ATP1B1P05026 303 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 AKAIN1P0CW23 69 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 OR8G3PP0DMU2 310 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 CD53P19397 219 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 IGFBP4P22692 258 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 CCINQ13939 588 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 IRF3Q14653 427 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 NIPAL3Q6P499 406 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 TMEM150AQ86TG1 271 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 PFN4Q8NHR9 129 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 TMEM234Q8WY98 164 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 SYT4Q9H2B2 425 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 NOX4Q9NPH5 578 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 CMC2Q9NRP2 79 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 SDHAF3Q9NRP4 125 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 STARD5Q9NSY2 213 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 ERVK-19Q9WJR5 959 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 CHST2Q9Y4C5 530 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 TEX51A0A1B0GUA7 166 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 ZNF726A6NNF4 738 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 H3BQ06 376 aaPredicted RBP6.2□□□□□ -1.42
CSDE1-205ENST00000438362 AKR7A2O43488 359 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 THBS1P07996 1170 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 HCKP08631 526 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 CD34P28906 385 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 RORAP35398 523 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 PBX2P40425 430 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 VEGFCP49767 419 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 CCR9P51686 369 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 CDK5Q00535 292 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 PLCXD2Q0VAA5 305 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 SCRN3Q0VDG4 424 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 AIMP2Q13155 320 aaKnown RBP6.2□□□□□ -1.42
CSDE1-205ENST00000438362 GK2Q14410 553 aaPredicted RBP6.2□□□□□ -1.42
CSDE1-205ENST00000438362 TCTE1Q5JU00 501 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 GLCCI1Q86VQ1 547 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 INTS14Q96SY0 518 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 TSNAXQ99598 290 aaKnown RBP6.2□□□□□ -1.42
CSDE1-205ENST00000438362 ATF6BQ99941 703 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 LMF2Q9BU23 707 aaKnown RBP6.2□□□□□ -1.42
CSDE1-205ENST00000438362 SLC38A1Q9H2H9 487 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 PDE7BQ9NP56 450 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 MBNL1Q9NR56 388 aaKnown RBP6.2□□□□□ -1.42
CSDE1-205ENST00000438362 DUSP22Q9NRW4 184 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 FKBP14Q9NWM8 211 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 SCML1Q9UN30 329 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 PLEKHM1Q9Y4G2 1056 aa6.2□□□□□ -1.42
CSDE1-205ENST00000438362 TMEM72A0PK05 275 aa6.19□□□□□ -1.42
CSDE1-205ENST00000438362 CHP2O43745 196 aa6.19□□□□□ -1.42
CSDE1-205ENST00000438362 RAD1O60671 282 aa6.19□□□□□ -1.42
CSDE1-205ENST00000438362 LIMS3P0CW19 117 aa6.19□□□□□ -1.42
CSDE1-205ENST00000438362 LIMS4P0CW20 117 aa6.19□□□□□ -1.42
CSDE1-205ENST00000438362 CAPZA1P52907 286 aa6.19□□□□□ -1.42
CSDE1-205ENST00000438362 LTBQ06643 244 aa6.19□□□□□ -1.42
CSDE1-205ENST00000438362 SERTAD2Q14140 314 aa6.19□□□□□ -1.42
CSDE1-205ENST00000438362 TRMT12Q53H54 448 aaKnown RBP6.19□□□□□ -1.42
CSDE1-205ENST00000438362 LAIR1Q6GTX8 287 aa6.19□□□□□ -1.42
CSDE1-205ENST00000438362 ELP2Q6IA86 826 aa6.19□□□□□ -1.42
CSDE1-205ENST00000438362 BTN2A1Q7KYR7 527 aa6.19□□□□□ -1.42
CSDE1-205ENST00000438362 FOXRED2Q8IWF2 684 aa6.19□□□□□ -1.42
CSDE1-205ENST00000438362 IL17RCQ8NAC3 791 aa6.19□□□□□ -1.42
CSDE1-205ENST00000438362 OR2A1Q8NGT9 310 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms