RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 TIAF1O95411 115 aa23.48■■□□□ 1.35
CPNE1-216ENST00000437340 ABCD3P28288 659 aa23.48■■□□□ 1.35
CPNE1-216ENST00000437340 RPS4XP62701 263 aaKnown RBP23.48■■□□□ 1.35
CPNE1-216ENST00000437340 RGS21Q2M5E4 152 aa23.48■■□□□ 1.35
CPNE1-216ENST00000437340 ZNF322Q6U7Q0 402 aaPredicted RBP23.48■■□□□ 1.35
CPNE1-216ENST00000437340 BPHLQ86WA6 291 aaPredicted RBP23.48■■□□□ 1.35
CPNE1-216ENST00000437340 OR5M3Q8NGP4 307 aa23.48■■□□□ 1.35
CPNE1-216ENST00000437340 CHPT1Q8WUD6 406 aa23.48■■□□□ 1.35
CPNE1-216ENST00000437340 COQ7Q99807 217 aa23.48■■□□□ 1.35
CPNE1-216ENST00000437340 SEMA4CQ9C0C4 833 aa23.48■■□□□ 1.35
CPNE1-216ENST00000437340 CDC14CA4D256 554 aa23.47■■□□□ 1.35
CPNE1-216ENST00000437340 C12orf71A8MTZ7 269 aa23.47■■□□□ 1.35
CPNE1-216ENST00000437340 ARPC3O15145 178 aa23.47■■□□□ 1.35
CPNE1-216ENST00000437340 IDH3BO43837 385 aa23.47■■□□□ 1.35
CPNE1-216ENST00000437340 SULT1C4O75897 302 aa23.47■■□□□ 1.35
CPNE1-216ENST00000437340 HEXBP07686 556 aa23.47■■□□□ 1.35
CPNE1-216ENST00000437340 CD79BP40259 229 aa23.47■■□□□ 1.35
CPNE1-216ENST00000437340 POU4F2Q12837 409 aa23.47■■□□□ 1.35
CPNE1-216ENST00000437340 CD200R1LQ6Q8B3 271 aa23.47■■□□□ 1.35
CPNE1-216ENST00000437340 ANKRD37Q7Z713 158 aa23.47■■□□□ 1.35
CPNE1-216ENST00000437340 IFI44Q8TCB0 444 aa23.47■■□□□ 1.35
CPNE1-216ENST00000437340 GPX7Q96SL4 187 aaPredicted RBP23.47■■□□□ 1.35
CPNE1-216ENST00000437340 ADAM19Q9H013 955 aa23.47■■□□□ 1.35
CPNE1-216ENST00000437340 NUAK2Q9H093 628 aa23.47■■□□□ 1.35
CPNE1-216ENST00000437340 CRNNQ9UBG3 495 aaPredicted RBP23.47■■□□□ 1.35
CPNE1-216ENST00000437340 PCDHGA5Q9Y5G8 931 aa23.47■■□□□ 1.35
CPNE1-216ENST00000437340 IDSB3KWA1 339 aa23.47■■□□□ 1.35
CPNE1-216ENST00000437340 PLD2O14939 933 aa23.47■■□□□ 1.35
CPNE1-216ENST00000437340 IL1AP01583 271 aa23.47■■□□□ 1.35
CPNE1-216ENST00000437340 RPS19P39019 145 aaKnown RBP23.47■■□□□ 1.35
CPNE1-216ENST00000437340 GRK6P43250 576 aa23.47■■□□□ 1.35
CPNE1-216ENST00000437340 RORCP51449 518 aa23.47■■□□□ 1.35
CPNE1-216ENST00000437340 RPS7P62081 194 aaKnown RBP23.47■■□□□ 1.35
CPNE1-216ENST00000437340 ZNF117Q03924 483 aa23.47■■□□□ 1.35
CPNE1-216ENST00000437340 FCRLBQ6BAA4 426 aa23.47■■□□□ 1.35
CPNE1-216ENST00000437340 OVCH1Q7RTY7 1134 aa23.47■■□□□ 1.35
CPNE1-216ENST00000437340 PPP1R3BQ86XI6 285 aa23.47■■□□□ 1.35
CPNE1-216ENST00000437340 LRRC17Q8N6Y2 441 aa23.47■■□□□ 1.35
CPNE1-216ENST00000437340 SPRYD4Q8WW59 207 aaPredicted RBP23.47■■□□□ 1.35
CPNE1-216ENST00000437340 OR51V1Q9H2C8 321 aa23.47■■□□□ 1.35
CPNE1-216ENST00000437340 SYNDIG1Q9H7V2 258 aa23.47■■□□□ 1.35
CPNE1-216ENST00000437340 PPIEQ9UNP9 301 aaKnown RBP23.47■■□□□ 1.35
CPNE1-216ENST00000437340 SAGE2PA6NJ88 616 aa23.46■■□□□ 1.35
CPNE1-216ENST00000437340 MCIDASD6RGH6 385 aa23.46■■□□□ 1.35
CPNE1-216ENST00000437340 NDUFB5O43674 189 aa23.46■■□□□ 1.35
CPNE1-216ENST00000437340 MST1P26927 711 aa23.46■■□□□ 1.35
CPNE1-216ENST00000437340 FGF9P31371 208 aaPredicted RBP23.46■■□□□ 1.35
CPNE1-216ENST00000437340 DUSP3P51452 185 aaPredicted RBP23.46■■□□□ 1.35
CPNE1-216ENST00000437340 RPS25P62851 125 aaKnown RBP23.46■■□□□ 1.35
CPNE1-216ENST00000437340 RNF4P78317 190 aa23.46■■□□□ 1.35
CPNE1-216ENST00000437340 ZNF45Q02386 682 aa23.46■■□□□ 1.35
CPNE1-216ENST00000437340 GPR50Q13585 617 aa23.46■■□□□ 1.35
CPNE1-216ENST00000437340 ZNF385CQ66K41 422 aaPredicted RBP23.46■■□□□ 1.35
CPNE1-216ENST00000437340 SHISA6Q6ZSJ9 500 aa23.46■■□□□ 1.35
CPNE1-216ENST00000437340 ZNF563Q8TA94 476 aa23.46■■□□□ 1.35
CPNE1-216ENST00000437340 TBL1XR1Q9BZK7 514 aa23.46■■□□□ 1.35
CPNE1-216ENST00000437340 NRIP3Q9NQ35 241 aa23.46■■□□□ 1.35
CPNE1-216ENST00000437340 LOC105378220A0A1B0GUY1 285 aaPredicted RBP23.45■■□□□ 1.34
CPNE1-216ENST00000437340 ALOX12BO75342 701 aa23.45■■□□□ 1.34
CPNE1-216ENST00000437340 LALBAP00709 142 aa23.45■■□□□ 1.34
CPNE1-216ENST00000437340 SBK2P0C263 348 aa23.45■■□□□ 1.34
CPNE1-216ENST00000437340 ETV6P41212 452 aa23.45■■□□□ 1.34
CPNE1-216ENST00000437340 NUBP1P53384 320 aa23.45■■□□□ 1.34
CPNE1-216ENST00000437340 GALEQ14376 348 aa23.45■■□□□ 1.34
CPNE1-216ENST00000437340 ZNF74Q16587 644 aa23.45■■□□□ 1.34
CPNE1-216ENST00000437340 ZNF791Q3KP31 576 aaPredicted RBP23.45■■□□□ 1.34
CPNE1-216ENST00000437340 FAAH2Q6GMR7 532 aa23.45■■□□□ 1.34
CPNE1-216ENST00000437340 DCDC5Q6ZRR9 648 aa23.45■■□□□ 1.34
CPNE1-216ENST00000437340 C1GALT1C1Q96EU7 318 aa23.45■■□□□ 1.34
CPNE1-216ENST00000437340 KCTD7Q96MP8 289 aa23.45■■□□□ 1.34
CPNE1-216ENST00000437340 MED18Q9BUE0 208 aa23.45■■□□□ 1.34
CPNE1-216ENST00000437340 ALG8Q9BVK2 526 aa23.45■■□□□ 1.34
CPNE1-216ENST00000437340 HIF3AQ9Y2N7 669 aa23.45■■□□□ 1.34
CPNE1-216ENST00000437340 GSTK1Q9Y2Q3 226 aa23.45■■□□□ 1.34
CPNE1-216ENST00000437340 IER3IP1Q9Y5U9 82 aa23.45■■□□□ 1.34
CPNE1-216ENST00000437340 TRDV1A0A1B0GX56 115 aa23.45■■□□□ 1.34
CPNE1-216ENST00000437340 ZC3H12DA2A288 527 aaKnown RBP23.45■■□□□ 1.34
CPNE1-216ENST00000437340 OR6C70A6NIJ9 312 aa23.45■■□□□ 1.34
CPNE1-216ENST00000437340 VSTM2BA6NLU5 285 aa23.45■■□□□ 1.34
CPNE1-216ENST00000437340 LRRN3E7EW58 273 aa23.45■■□□□ 1.34
CPNE1-216ENST00000437340 HCRTR2O43614 444 aa23.45■■□□□ 1.34
CPNE1-216ENST00000437340 GAAP10253 952 aa23.45■■□□□ 1.34
CPNE1-216ENST00000437340 CAPZA2P47755 286 aa23.45■■□□□ 1.34
CPNE1-216ENST00000437340 DAB2P98082 770 aa23.45■■□□□ 1.34
CPNE1-216ENST00000437340 PLA2G2CQ5R387 149 aa23.45■■□□□ 1.34
CPNE1-216ENST00000437340 DESI1Q6ICB0 168 aa23.45■■□□□ 1.34
CPNE1-216ENST00000437340 B3GLCTQ6Y288 498 aa23.45■■□□□ 1.34
CPNE1-216ENST00000437340 CYB561A3Q8NBI2 242 aa23.45■■□□□ 1.34
CPNE1-216ENST00000437340 NFAM1Q8NET5 270 aaPredicted RBP23.45■■□□□ 1.34
CPNE1-216ENST00000437340 OR52E2Q8NGJ4 325 aa23.45■■□□□ 1.34
CPNE1-216ENST00000437340 METTL21AQ8WXB1 218 aa23.45■■□□□ 1.34
CPNE1-216ENST00000437340 GFM1Q96RP9 751 aaKnown RBP23.45■■□□□ 1.34
CPNE1-216ENST00000437340 DAPL1A0PJW8 107 aa23.44■■□□□ 1.34
CPNE1-216ENST00000437340 KHNYNO15037 678 aaKnown RBP23.44■■□□□ 1.34
CPNE1-216ENST00000437340 CYC1P08574 325 aa23.44■■□□□ 1.34
CPNE1-216ENST00000437340 HIST1H1CP16403 213 aaKnown RBP23.44■■□□□ 1.34
CPNE1-216ENST00000437340 RPL4P36578 427 aaKnown RBP23.44■■□□□ 1.34
CPNE1-216ENST00000437340 NRG3P56975 720 aa23.44■■□□□ 1.34
CPNE1-216ENST00000437340 ACTC1P68032 377 aa23.44■■□□□ 1.34
CPNE1-216ENST00000437340 ACTA1P68133 377 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms