RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 HACD4Q5VWC8 232 aa10.47□□□□□ -0.73
SCN4A-201ENST00000435607 LCN10Q6JVE6 187 aa10.47□□□□□ -0.73
SCN4A-201ENST00000435607 CD300LGQ6UXG3 332 aa10.47□□□□□ -0.73
SCN4A-201ENST00000435607 CMTM4Q8IZR5 234 aa10.47□□□□□ -0.73
SCN4A-201ENST00000435607 CPPED1Q9BRF8 314 aaPredicted RBP10.47□□□□□ -0.73
SCN4A-201ENST00000435607 CCDC106Q9BWC9 280 aa10.47□□□□□ -0.73
SCN4A-201ENST00000435607 SMIM17P0DL12 118 aa10.47□□□□□ -0.73
SCN4A-201ENST00000435607 BAXQ07812 192 aa10.47□□□□□ -0.73
SCN4A-201ENST00000435607 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.47□□□□□ -0.73
SCN4A-201ENST00000435607 SYT13Q7L8C5 426 aa10.47□□□□□ -0.73
SCN4A-201ENST00000435607 CATSPERDQ86XM0 798 aa10.47□□□□□ -0.73
SCN4A-201ENST00000435607 C19orf47Q8N9M1 422 aaKnown RBP10.47□□□□□ -0.73
SCN4A-201ENST00000435607 SLC45A3Q96JT2 553 aa10.47□□□□□ -0.73
SCN4A-201ENST00000435607 RPS10P5Q9NQ39 176 aa10.47□□□□□ -0.73
SCN4A-201ENST00000435607 AGAP14A8MT82 685 aa10.47□□□□□ -0.73
SCN4A-201ENST00000435607 NOTOA8MTQ0 251 aa10.47□□□□□ -0.73
SCN4A-201ENST00000435607 LDB3O75112 727 aa10.47□□□□□ -0.73
SCN4A-201ENST00000435607 DPP4P27487 766 aa10.47□□□□□ -0.73
SCN4A-201ENST00000435607 PLD6Q8N2A8 252 aaKnown RBP10.47□□□□□ -0.73
SCN4A-201ENST00000435607 OR56B4Q8NH76 319 aa10.47□□□□□ -0.73
SCN4A-201ENST00000435607 FAM122AQ96E09 287 aa10.47□□□□□ -0.73
SCN4A-201ENST00000435607 FBXL20Q96IG2 436 aa10.47□□□□□ -0.73
SCN4A-201ENST00000435607 HYLS1Q96M11 299 aa10.47□□□□□ -0.73
SCN4A-201ENST00000435607 USP36Q9P275 1121 aaKnown RBP10.47□□□□□ -0.73
SCN4A-201ENST00000435607 LRIT2A6NDA9 550 aa10.47□□□□□ -0.73
SCN4A-201ENST00000435607 KDM4EB2RXH2 506 aaPredicted RBP10.47□□□□□ -0.73
SCN4A-201ENST00000435607 ZNF264O43296 627 aa10.47□□□□□ -0.73
SCN4A-201ENST00000435607 PLRG1O43660 514 aaKnown RBP10.47□□□□□ -0.73
SCN4A-201ENST00000435607 SUSD5O60279 629 aa10.47□□□□□ -0.73
SCN4A-201ENST00000435607 SFRP4Q6FHJ7 346 aaPredicted RBP10.47□□□□□ -0.73
SCN4A-201ENST00000435607 C6orf15Q6UXA7 325 aaPredicted RBP10.47□□□□□ -0.73
SCN4A-201ENST00000435607 RTP4Q96DX8 246 aa10.47□□□□□ -0.73
SCN4A-201ENST00000435607 DTD2Q96FN9 168 aa10.47□□□□□ -0.73
SCN4A-201ENST00000435607 SLC2A8Q9NY64 477 aa10.47□□□□□ -0.73
SCN4A-201ENST00000435607 ZNF454Q8N9F8 522 aa10.47□□□□□ -0.73
SCN4A-201ENST00000435607 OR52B6Q8NGF0 335 aa10.47□□□□□ -0.73
SCN4A-201ENST00000435607 OR56B1Q8NGI3 324 aa10.47□□□□□ -0.73
SCN4A-201ENST00000435607 SYNPRQ8TBG9 265 aa10.47□□□□□ -0.73
SCN4A-201ENST00000435607 HRASLS5Q96KN8 279 aa10.47□□□□□ -0.73
SCN4A-201ENST00000435607 SCPEP1Q9HB40 452 aa10.47□□□□□ -0.73
SCN4A-201ENST00000435607 ACTL7AQ9Y615 435 aa10.47□□□□□ -0.73
SCN4A-201ENST00000435607 A0A0D9SG52 128 aa10.46□□□□□ -0.73
SCN4A-201ENST00000435607 CLIC3O95833 236 aa10.46□□□□□ -0.73
SCN4A-201ENST00000435607 RPS5P46782 204 aaKnown RBP10.46□□□□□ -0.73
SCN4A-201ENST00000435607 TAS2R19P59542 299 aa10.46□□□□□ -0.73
SCN4A-201ENST00000435607 ZP2Q05996 745 aa10.46□□□□□ -0.73
SCN4A-201ENST00000435607 LYPD8Q6UX82 237 aa10.46□□□□□ -0.73
SCN4A-201ENST00000435607 BTLAQ7Z6A9 289 aa10.46□□□□□ -0.73
SCN4A-201ENST00000435607 LSMEM2Q8N112 164 aa10.46□□□□□ -0.73
SCN4A-201ENST00000435607 ADAM19Q9H013 955 aa10.46□□□□□ -0.73
SCN4A-201ENST00000435607 P2RY12Q9H244 342 aa10.46□□□□□ -0.73
SCN4A-201ENST00000435607 VRTNQ9H8Y1 702 aa10.46□□□□□ -0.73
SCN4A-201ENST00000435607 DMRT3Q9NQL9 472 aa10.46□□□□□ -0.73
SCN4A-201ENST00000435607 ZCWPW2A0A1B0GU75 182 aa10.46□□□□□ -0.73
SCN4A-201ENST00000435607 NFYBP25208 207 aa10.46□□□□□ -0.73
SCN4A-201ENST00000435607 GABARAPL2P60520 117 aa10.46□□□□□ -0.73
SCN4A-201ENST00000435607 Q6ZRG5 221 aa10.46□□□□□ -0.73
SCN4A-201ENST00000435607 ZNF551Q7Z340 670 aaPredicted RBP10.46□□□□□ -0.73
SCN4A-201ENST00000435607 LIPHQ8WWY8 451 aa10.46□□□□□ -0.73
SCN4A-201ENST00000435607 SLAMF9Q96A28 289 aa10.46□□□□□ -0.73
SCN4A-201ENST00000435607 OR2B2Q9GZK3 357 aa10.46□□□□□ -0.73
SCN4A-201ENST00000435607 C1orf123Q9NWV4 160 aa10.46□□□□□ -0.73
SCN4A-201ENST00000435607 BMXP51813 675 aa10.46□□□□□ -0.73
SCN4A-201ENST00000435607 WNT4P56705 351 aa10.46□□□□□ -0.73
SCN4A-201ENST00000435607 NTHL1P78549 312 aa10.46□□□□□ -0.73
SCN4A-201ENST00000435607 TSPYL5Q86VY4 417 aaPredicted RBP10.46□□□□□ -0.73
SCN4A-201ENST00000435607 CBARPQ8N350 705 aaPredicted RBP10.46□□□□□ -0.73
SCN4A-201ENST00000435607 KDF1Q8NAX2 398 aaPredicted RBP10.46□□□□□ -0.73
SCN4A-201ENST00000435607 VN1R2Q8NFZ6 395 aa10.46□□□□□ -0.73
SCN4A-201ENST00000435607 OR4M1Q8NGD0 313 aa10.46□□□□□ -0.73
SCN4A-201ENST00000435607 NT5C3BQ969T7 300 aa10.46□□□□□ -0.73
SCN4A-201ENST00000435607 WASH6PQ9NQA3 447 aa10.46□□□□□ -0.73
SCN4A-201ENST00000435607 FOXO6A8MYZ6 492 aa10.46□□□□□ -0.74
SCN4A-201ENST00000435607 RNASET2O00584 256 aaKnown RBP10.46□□□□□ -0.74
SCN4A-201ENST00000435607 STSP08842 583 aa10.46□□□□□ -0.74
SCN4A-201ENST00000435607 MGST1P10620 155 aaKnown RBP10.46□□□□□ -0.74
SCN4A-201ENST00000435607 AHRP35869 848 aa10.46□□□□□ -0.74
SCN4A-201ENST00000435607 RGRP47804 291 aa10.46□□□□□ -0.74
SCN4A-201ENST00000435607 GPLD1P80108 840 aa10.46□□□□□ -0.74
SCN4A-201ENST00000435607 RTL8BQ17RB0 113 aa10.46□□□□□ -0.74
SCN4A-201ENST00000435607 TMEM41BQ5BJD5 291 aa10.46□□□□□ -0.74
SCN4A-201ENST00000435607 MAMDC4Q6UXC1 1216 aa10.46□□□□□ -0.74
SCN4A-201ENST00000435607 MRPL43Q8N983 215 aaKnown RBP10.46□□□□□ -0.74
SCN4A-201ENST00000435607 GDPD1Q8N9F7 314 aa10.46□□□□□ -0.74
SCN4A-201ENST00000435607 CHST14Q8NCH0 376 aa10.46□□□□□ -0.74
SCN4A-201ENST00000435607 RNF38Q9H0F5 515 aa10.46□□□□□ -0.74
SCN4A-201ENST00000435607 PPLO60437 1756 aa10.46□□□□□ -0.74
SCN4A-201ENST00000435607 SPATA31D1Q6ZQQ2 1576 aa10.46□□□□□ -0.74
SCN4A-201ENST00000435607 XKRY2A2RUG3 117 aa10.46□□□□□ -0.74
SCN4A-201ENST00000435607 TXNL1O43396 289 aa10.46□□□□□ -0.74
SCN4A-201ENST00000435607 CLDN1O95832 211 aa10.46□□□□□ -0.74
SCN4A-201ENST00000435607 GNB1P62873 340 aa10.46□□□□□ -0.74
SCN4A-201ENST00000435607 ERVK-25P63136 954 aa10.46□□□□□ -0.74
SCN4A-201ENST00000435607 FLI1Q01543 452 aaPredicted RBP10.46□□□□□ -0.74
SCN4A-201ENST00000435607 SPOCK1Q08629 439 aa10.46□□□□□ -0.74
SCN4A-201ENST00000435607 RTP2Q5QGT7 225 aa10.46□□□□□ -0.74
SCN4A-201ENST00000435607 ZNF322Q6U7Q0 402 aaPredicted RBP10.46□□□□□ -0.74
SCN4A-201ENST00000435607 OR51L1Q8NGJ5 315 aa10.46□□□□□ -0.74
SCN4A-201ENST00000435607 CNIH3Q8TBE1 160 aa10.46□□□□□ -0.74
SCN4A-201ENST00000435607 SLC35E1Q96K37 410 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms