RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 CKAP2Q8WWK9 683 aa15.6■□□□□ 0.09
NUP50-208ENST00000430547 PLPPR2Q96GM1 343 aa15.6■□□□□ 0.09
NUP50-208ENST00000430547 CCL19Q99731 98 aa15.6■□□□□ 0.09
NUP50-208ENST00000430547 USB1Q9BQ65 265 aaKnown RBP15.6■□□□□ 0.09
NUP50-208ENST00000430547 NAA11Q9BSU3 229 aaPredicted RBP15.6■□□□□ 0.09
NUP50-208ENST00000430547 RABEP2Q9H5N1 569 aa15.6■□□□□ 0.09
NUP50-208ENST00000430547 A4GALTQ9NPC4 353 aa15.6■□□□□ 0.09
NUP50-208ENST00000430547 TMEM45AQ9NWC5 275 aa15.6■□□□□ 0.09
NUP50-208ENST00000430547 PRSS50Q9UI38 385 aa15.6■□□□□ 0.09
NUP50-208ENST00000430547 ING1Q9UK53 422 aaPredicted RBP15.6■□□□□ 0.09
NUP50-208ENST00000430547 PRDM4Q9UKN5 801 aa15.6■□□□□ 0.09
NUP50-208ENST00000430547 TRAPPC4Q9Y296 219 aa15.6■□□□□ 0.09
NUP50-208ENST00000430547 NOSIPQ9Y314 301 aaKnown RBP15.6■□□□□ 0.09
NUP50-208ENST00000430547 KLF4O43474 513 aa15.59■□□□□ 0.09
NUP50-208ENST00000430547 EIF1BO60739 113 aaKnown RBP15.59■□□□□ 0.09
NUP50-208ENST00000430547 ATP4BP51164 291 aa15.59■□□□□ 0.09
NUP50-208ENST00000430547 CAPRIN1Q14444 709 aaKnown RBP15.59■□□□□ 0.09
NUP50-208ENST00000430547 ZNF311Q5JNZ3 666 aa15.59■□□□□ 0.09
NUP50-208ENST00000430547 LRIF1Q5T3J3 769 aa15.59■□□□□ 0.09
NUP50-208ENST00000430547 PRAMEF8Q5VWM4 474 aa15.59■□□□□ 0.09
NUP50-208ENST00000430547 PRAMEF7Q5VXH5 474 aa15.59■□□□□ 0.09
NUP50-208ENST00000430547 WBP2NLQ6ICG8 309 aa15.59■□□□□ 0.09
NUP50-208ENST00000430547 ZNF704Q6ZNC4 412 aaPredicted RBP15.59■□□□□ 0.09
NUP50-208ENST00000430547 BHLHA15Q7RTS1 189 aaPredicted RBP15.59■□□□□ 0.09
NUP50-208ENST00000430547 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.59■□□□□ 0.09
NUP50-208ENST00000430547 FUNDC1Q8IVP5 155 aa15.59■□□□□ 0.09
NUP50-208ENST00000430547 UBE2J2Q8N2K1 259 aa15.59■□□□□ 0.09
NUP50-208ENST00000430547 BBS10Q8TAM1 723 aa15.59■□□□□ 0.09
NUP50-208ENST00000430547 HSD17B8Q92506 261 aa15.59■□□□□ 0.09
NUP50-208ENST00000430547 SPATA9Q9BWV2 254 aa15.59■□□□□ 0.09
NUP50-208ENST00000430547 POTEKPQ9BYX7 375 aa15.59■□□□□ 0.09
NUP50-208ENST00000430547 TRIM33Q9UPN9 1127 aa15.59■□□□□ 0.09
NUP50-208ENST00000430547 CORO2BQ9UQ03 480 aa15.59■□□□□ 0.09
NUP50-208ENST00000430547 PRR14LQ5THK1 2151 aa15.58■□□□□ 0.08
NUP50-208ENST00000430547 IGKV3D-15A0A087WSY6 115 aa15.58■□□□□ 0.08
NUP50-208ENST00000430547 ZNF814B7Z6K7 855 aa15.58■□□□□ 0.08
NUP50-208ENST00000430547 SMPD2O60906 423 aa15.58■□□□□ 0.08
NUP50-208ENST00000430547 LYZL6O75951 148 aa15.58■□□□□ 0.08
NUP50-208ENST00000430547 CNOT4O95628 575 aaKnown RBP15.58■□□□□ 0.08
NUP50-208ENST00000430547 NUDT7P0C024 238 aa15.58■□□□□ 0.08
NUP50-208ENST00000430547 IDUAP35475 653 aa15.58■□□□□ 0.08
NUP50-208ENST00000430547 ADAM8P78325 824 aa15.58■□□□□ 0.08
NUP50-208ENST00000430547 STK11Q15831 433 aa15.58■□□□□ 0.08
NUP50-208ENST00000430547 GCNT6Q5T4J0 391 aa15.58■□□□□ 0.08
NUP50-208ENST00000430547 P3H2Q8IVL5 708 aa15.58■□□□□ 0.08
NUP50-208ENST00000430547 MAL2Q969L2 176 aa15.58■□□□□ 0.08
NUP50-208ENST00000430547 APH1AQ96BI3 265 aa15.58■□□□□ 0.08
NUP50-208ENST00000430547 THOC1Q96FV9 657 aaKnown RBP15.58■□□□□ 0.08
NUP50-208ENST00000430547 TMUB1Q9BVT8 246 aa15.58■□□□□ 0.08
NUP50-208ENST00000430547 ESRP2Q9H6T0 727 aaKnown RBP15.58■□□□□ 0.08
NUP50-208ENST00000430547 SLC25A37Q9NYZ2 338 aa15.58■□□□□ 0.08
NUP50-208ENST00000430547 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.58■□□□□ 0.08
NUP50-208ENST00000430547 ZNF716A6NP11 495 aa15.57■□□□□ 0.08
NUP50-208ENST00000430547 EVPLLA8MZ36 301 aa15.57■□□□□ 0.08
NUP50-208ENST00000430547 ARHGEF9O43307 516 aa15.57■□□□□ 0.08
NUP50-208ENST00000430547 MRPL33O75394 65 aaKnown RBP15.57■□□□□ 0.08
NUP50-208ENST00000430547 GPIP06744 558 aa15.57■□□□□ 0.08
NUP50-208ENST00000430547 BMP2P12643 396 aa15.57■□□□□ 0.08
NUP50-208ENST00000430547 HOXB9P17482 250 aaPredicted RBP15.57■□□□□ 0.08
NUP50-208ENST00000430547 LOXP28300 417 aaPredicted RBP15.57■□□□□ 0.08
NUP50-208ENST00000430547 ACAA2P42765 397 aaKnown RBP15.57■□□□□ 0.08
NUP50-208ENST00000430547 NKX6-1P78426 367 aaPredicted RBP15.57■□□□□ 0.08
NUP50-208ENST00000430547 FOXD4Q12950 439 aaPredicted RBP15.57■□□□□ 0.08
NUP50-208ENST00000430547 TAB1Q15750 504 aa15.57■□□□□ 0.08
NUP50-208ENST00000430547 PAGE3Q5JUK9 113 aa15.57■□□□□ 0.08
NUP50-208ENST00000430547 KRT73Q86Y46 540 aa15.57■□□□□ 0.08
NUP50-208ENST00000430547 CCDC103Q8IW40 242 aa15.57■□□□□ 0.08
NUP50-208ENST00000430547 CLIP4Q8N3C7 705 aa15.57■□□□□ 0.08
NUP50-208ENST00000430547 PIP5K1AQ99755 562 aa15.57■□□□□ 0.08
NUP50-208ENST00000430547 SPATA5L1Q9BVQ7 753 aa15.57■□□□□ 0.08
NUP50-208ENST00000430547 TAPBPLQ9BX59 468 aa15.57■□□□□ 0.08
NUP50-208ENST00000430547 ADAM19Q9H013 955 aa15.57■□□□□ 0.08
NUP50-208ENST00000430547 BCL2L10Q9HD36 194 aa15.57■□□□□ 0.08
NUP50-208ENST00000430547 NPHS2Q9NP85 383 aa15.57■□□□□ 0.08
NUP50-208ENST00000430547 DCTN4Q9UJW0 460 aa15.57■□□□□ 0.08
NUP50-208ENST00000430547 ARID1AO14497 2285 aa15.56■□□□□ 0.08
NUP50-208ENST00000430547 A0A1W2PP18 115 aa15.56■□□□□ 0.08
NUP50-208ENST00000430547 ZC3H12DA2A288 527 aaKnown RBP15.56■□□□□ 0.08
NUP50-208ENST00000430547 PGM3O95394 542 aa15.56■□□□□ 0.08
NUP50-208ENST00000430547 IGHV3-9P01782 118 aa15.56■□□□□ 0.08
NUP50-208ENST00000430547 IMPDH2P12268 514 aa15.56■□□□□ 0.08
NUP50-208ENST00000430547 SLC16A1P53985 500 aa15.56■□□□□ 0.08
NUP50-208ENST00000430547 RIPPLY3P57055 190 aa15.56■□□□□ 0.08
NUP50-208ENST00000430547 SHEQ5VZ18 495 aa15.56■□□□□ 0.08
NUP50-208ENST00000430547 FBXW9Q5XUX1 488 aa15.56■□□□□ 0.08
NUP50-208ENST00000430547 CASP12Q6UXS9 341 aa15.56■□□□□ 0.08
NUP50-208ENST00000430547 SERPINA11Q86U17 422 aa15.56■□□□□ 0.08
NUP50-208ENST00000430547 NFKBIDQ8NI38 313 aa15.56■□□□□ 0.08
NUP50-208ENST00000430547 STON2Q8WXE9 905 aa15.56■□□□□ 0.08
NUP50-208ENST00000430547 MUCL1Q96DR8 90 aa15.56■□□□□ 0.08
NUP50-208ENST00000430547 SIKE1Q9BRV8 207 aa15.56■□□□□ 0.08
NUP50-208ENST00000430547 VAPAQ9P0L0 249 aa15.56■□□□□ 0.08
NUP50-208ENST00000430547 SLAMF8Q9P0V8 285 aa15.56■□□□□ 0.08
NUP50-208ENST00000430547 RPS6KB2Q9UBS0 482 aa15.56■□□□□ 0.08
NUP50-208ENST00000430547 SLC9A8Q9Y2E8 581 aa15.56■□□□□ 0.08
NUP50-208ENST00000430547 ROS1P08922 2347 aa15.56■□□□□ 0.08
NUP50-208ENST00000430547 FLNAP21333 2647 aaKnown RBP15.55■□□□□ 0.08
NUP50-208ENST00000430547 CIB4A0PJX0 185 aa15.55■□□□□ 0.08
NUP50-208ENST00000430547 A8MVM7 634 aa15.55■□□□□ 0.08
NUP50-208ENST00000430547 ANGPT2O15123 496 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms