RNA–Protein interactions for RNA: ENST00000430085.5

CALD1-207, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-207ENST00000430085 ZNF3P17036 446 aa13.03□□□□□ -0.32
CALD1-207ENST00000430085 HK1P19367 917 aa13.03□□□□□ -0.32
CALD1-207ENST00000430085 CXCR1P25024 350 aa13.03□□□□□ -0.32
CALD1-207ENST00000430085 HTR1FP30939 366 aa13.03□□□□□ -0.32
CALD1-207ENST00000430085 RPL4P36578 427 aaKnown RBP13.03□□□□□ -0.32
CALD1-207ENST00000430085 EXT1Q16394 746 aa13.03□□□□□ -0.32
CALD1-207ENST00000430085 C3orf38Q5JPI3 329 aa13.03□□□□□ -0.32
CALD1-207ENST00000430085 ARHGAP11AQ6P4F7 1023 aa13.03□□□□□ -0.32
CALD1-207ENST00000430085 NUP54Q7Z3B4 507 aa13.03□□□□□ -0.32
CALD1-207ENST00000430085 LRRC17Q8N6Y2 441 aa13.03□□□□□ -0.32
CALD1-207ENST00000430085 BBS1Q8NFJ9 593 aa13.03□□□□□ -0.32
CALD1-207ENST00000430085 MGLLQ99685 303 aa13.03□□□□□ -0.32
CALD1-207ENST00000430085 TAPBPLQ9BX59 468 aa13.03□□□□□ -0.32
CALD1-207ENST00000430085 ADAM19Q9H013 955 aa13.03□□□□□ -0.32
CALD1-207ENST00000430085 RACGAP1Q9H0H5 632 aa13.03□□□□□ -0.32
CALD1-207ENST00000430085 FGF20Q9NP95 211 aaPredicted RBP13.03□□□□□ -0.32
CALD1-207ENST00000430085 CLEC2DQ9UHP7 191 aa13.03□□□□□ -0.32
CALD1-207ENST00000430085 PADI1Q9ULC6 663 aa13.03□□□□□ -0.32
CALD1-207ENST00000430085 LRRN3E7EW58 273 aa13.03□□□□□ -0.32
CALD1-207ENST00000430085 PRR23D1E9PI22 279 aaPredicted RBP13.03□□□□□ -0.32
CALD1-207ENST00000430085 CSO75390 466 aaKnown RBP13.03□□□□□ -0.32
CALD1-207ENST00000430085 OR2J2O76002 312 aa13.03□□□□□ -0.32
CALD1-207ENST00000430085 APOL3O95236 402 aa13.03□□□□□ -0.32
CALD1-207ENST00000430085 PRR23D2P0DMB1 279 aaPredicted RBP13.03□□□□□ -0.32
CALD1-207ENST00000430085 PEPDP12955 493 aa13.03□□□□□ -0.32
CALD1-207ENST00000430085 ZNF182P17025 639 aaPredicted RBP13.03□□□□□ -0.32
CALD1-207ENST00000430085 ATP6V1E1P36543 226 aa13.03□□□□□ -0.32
CALD1-207ENST00000430085 LSM3P62310 102 aaKnown RBP13.03□□□□□ -0.32
CALD1-207ENST00000430085 C17orf67Q0P5P2 114 aa13.03□□□□□ -0.32
CALD1-207ENST00000430085 FHL1Q13642 323 aa13.03□□□□□ -0.32
CALD1-207ENST00000430085 TOMM34Q15785 309 aaPredicted RBP13.03□□□□□ -0.32
CALD1-207ENST00000430085 FCRLBQ6BAA4 426 aa13.03□□□□□ -0.32
CALD1-207ENST00000430085 POMZP3Q6PJE2 187 aa13.03□□□□□ -0.32
CALD1-207ENST00000430085 C6orf15Q6UXA7 325 aaPredicted RBP13.03□□□□□ -0.32
CALD1-207ENST00000430085 SLC46A3Q7Z3Q1 461 aa13.03□□□□□ -0.32
CALD1-207ENST00000430085 NANOGP1Q8N7R0 232 aa13.03□□□□□ -0.32
CALD1-207ENST00000430085 PROKR2Q8NFJ6 384 aa13.03□□□□□ -0.32
CALD1-207ENST00000430085 ZFAND2BQ8WV99 257 aa13.03□□□□□ -0.32
CALD1-207ENST00000430085 TTC9Q92623 222 aa13.03□□□□□ -0.32
CALD1-207ENST00000430085 HGDQ93099 445 aa13.03□□□□□ -0.32
CALD1-207ENST00000430085 ZNF524Q96C55 264 aa13.03□□□□□ -0.32
CALD1-207ENST00000430085 LIN37Q96GY3 246 aaPredicted RBP13.03□□□□□ -0.32
CALD1-207ENST00000430085 ERMAPQ96PL5 475 aaPredicted RBP13.03□□□□□ -0.32
CALD1-207ENST00000430085 KLHDC3Q9BQ90 382 aa13.03□□□□□ -0.32
CALD1-207ENST00000430085 DDA1Q9BW61 102 aa13.03□□□□□ -0.32
CALD1-207ENST00000430085 ZNF700Q9H0M5 742 aa13.03□□□□□ -0.32
CALD1-207ENST00000430085 NANSQ9NR45 359 aa13.03□□□□□ -0.32
CALD1-207ENST00000430085 PTPRZ1P23471 2315 aaPredicted RBP13.03□□□□□ -0.32
CALD1-207ENST00000430085 SOCS6O14544 535 aa13.02□□□□□ -0.32
CALD1-207ENST00000430085 SLC25A12O75746 678 aa13.02□□□□□ -0.32
CALD1-207ENST00000430085 IGHEP01854 428 aa13.02□□□□□ -0.32
CALD1-207ENST00000430085 PAICSP22234 425 aaKnown RBP13.02□□□□□ -0.32
CALD1-207ENST00000430085 RGS6P49758 472 aa13.02□□□□□ -0.32
CALD1-207ENST00000430085 PRPS1P60891 318 aa13.02□□□□□ -0.32
CALD1-207ENST00000430085 AQP6Q13520 282 aa13.02□□□□□ -0.32
CALD1-207ENST00000430085 SPCS2Q15005 226 aa13.02□□□□□ -0.32
CALD1-207ENST00000430085 QPRTQ15274 297 aa13.02□□□□□ -0.32
CALD1-207ENST00000430085 SPHARQ15513 63 aa13.02□□□□□ -0.32
CALD1-207ENST00000430085 ZNF74Q16587 644 aa13.02□□□□□ -0.32
CALD1-207ENST00000430085 COL28A1Q2UY09 1125 aa13.02□□□□□ -0.32
CALD1-207ENST00000430085 NIPAL3Q6P499 406 aa13.02□□□□□ -0.32
CALD1-207ENST00000430085 ELP5Q8TE02 316 aa13.02□□□□□ -0.32
CALD1-207ENST00000430085 KLRF1Q9NZS2 232 aa13.02□□□□□ -0.32
CALD1-207ENST00000430085 OSGIN1Q9UJX0 560 aa13.02□□□□□ -0.32
CALD1-207ENST00000430085 EXOSC1Q9Y3B2 195 aaKnown RBP13.02□□□□□ -0.32
CALD1-207ENST00000430085 HS3ST3B1Q9Y662 390 aa13.02□□□□□ -0.32
CALD1-207ENST00000430085 AIREO43918 545 aa13.01□□□□□ -0.33
CALD1-207ENST00000430085 COX6A1P12074 109 aa13.01□□□□□ -0.33
CALD1-207ENST00000430085 CLK1P49759 484 aaKnown RBP13.01□□□□□ -0.33
CALD1-207ENST00000430085 ETV1P50549 477 aa13.01□□□□□ -0.33
CALD1-207ENST00000430085 POLR2HP52434 150 aaKnown RBP13.01□□□□□ -0.33
CALD1-207ENST00000430085 GAS1P54826 345 aa13.01□□□□□ -0.33
CALD1-207ENST00000430085 CLDN6P56747 220 aa13.01□□□□□ -0.33
CALD1-207ENST00000430085 VBP1P61758 197 aa13.01□□□□□ -0.33
CALD1-207ENST00000430085 ROR2Q01974 943 aaKnown RBP13.01□□□□□ -0.33
CALD1-207ENST00000430085 TSTQ16762 297 aaKnown RBP13.01□□□□□ -0.33
CALD1-207ENST00000430085 KIF26BQ2KJY2 2108 aa13.01□□□□□ -0.33
CALD1-207ENST00000430085 KLHL12Q53G59 568 aa13.01□□□□□ -0.33
CALD1-207ENST00000430085 CDCP2Q5VXM1 449 aa13.01□□□□□ -0.33
CALD1-207ENST00000430085 DPY19L2P2Q6ZN68 376 aa13.01□□□□□ -0.33
CALD1-207ENST00000430085 MEPCEQ7L2J0 689 aaKnown RBP13.01□□□□□ -0.33
CALD1-207ENST00000430085 SHFQ7M4L6 423 aa13.01□□□□□ -0.33
CALD1-207ENST00000430085 PIP4P1Q86T03 277 aa13.01□□□□□ -0.33
CALD1-207ENST00000430085 IGFN1Q86VF2 1251 aa13.01□□□□□ -0.33
CALD1-207ENST00000430085 GPR119Q8TDV5 335 aa13.01□□□□□ -0.33
CALD1-207ENST00000430085 MED20Q9H944 212 aa13.01□□□□□ -0.33
CALD1-207ENST00000430085 MMP25Q9NPA2 562 aa13.01□□□□□ -0.33
CALD1-207ENST00000430085 TIMMDC1Q9NPL8 285 aa13.01□□□□□ -0.33
CALD1-207ENST00000430085 TAS2R10Q9NYW0 307 aa13.01□□□□□ -0.33
CALD1-207ENST00000430085 LSM2Q9Y333 95 aaKnown RBP13.01□□□□□ -0.33
CALD1-207ENST00000430085 DCHS1Q96JQ0 3298 aa13.01□□□□□ -0.33
CALD1-207ENST00000430085 MCIDASD6RGH6 385 aa13.01□□□□□ -0.33
CALD1-207ENST00000430085 BLOC1S5-TXNDC5H3BN57 136 aa13.01□□□□□ -0.33
CALD1-207ENST00000430085 CCRL2O00421 344 aa13.01□□□□□ -0.33
CALD1-207ENST00000430085 PLD2O14939 933 aa13.01□□□□□ -0.33
CALD1-207ENST00000430085 MT-CO3P00414 261 aa13.01□□□□□ -0.33
CALD1-207ENST00000430085 FBXO45P0C2W1 286 aa13.01□□□□□ -0.33
CALD1-207ENST00000430085 TCN2P20062 427 aa13.01□□□□□ -0.33
CALD1-207ENST00000430085 GADD45AP24522 165 aa13.01□□□□□ -0.33
CALD1-207ENST00000430085 SLC16A1P53985 500 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms