RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 WDFY3Q8IZQ1 3526 aa11.52□□□□□ -0.57
CDH3-202ENST00000429102 DUXAA6NLW8 204 aa11.52□□□□□ -0.57
CDH3-202ENST00000429102 HRKO00198 91 aa11.52□□□□□ -0.57
CDH3-202ENST00000429102 CTSVO60911 334 aa11.52□□□□□ -0.57
CDH3-202ENST00000429102 KAT7O95251 611 aa11.52□□□□□ -0.57
CDH3-202ENST00000429102 F13BP05160 661 aa11.52□□□□□ -0.57
CDH3-202ENST00000429102 CT62P0C5K7 136 aa11.52□□□□□ -0.57
CDH3-202ENST00000429102 THBS2P35442 1172 aa11.52□□□□□ -0.57
CDH3-202ENST00000429102 ZNF136P52737 540 aa11.52□□□□□ -0.57
CDH3-202ENST00000429102 BEX5Q5H9J7 111 aa11.52□□□□□ -0.57
CDH3-202ENST00000429102 TCTE1Q5JU00 501 aa11.52□□□□□ -0.57
CDH3-202ENST00000429102 TANGO2Q6ICL3 276 aa11.52□□□□□ -0.57
CDH3-202ENST00000429102 KIAA1211LQ6NV74 962 aa11.52□□□□□ -0.57
CDH3-202ENST00000429102 GID4Q8IVV7 300 aa11.52□□□□□ -0.57
CDH3-202ENST00000429102 NXPE2Q96DL1 559 aa11.52□□□□□ -0.57
CDH3-202ENST00000429102 ELF4Q99607 663 aaPredicted RBP11.52□□□□□ -0.57
CDH3-202ENST00000429102 TIMP4Q99727 224 aa11.52□□□□□ -0.57
CDH3-202ENST00000429102 GHITMQ9H3K2 345 aa11.52□□□□□ -0.57
CDH3-202ENST00000429102 RANBP3Q9H6Z4 567 aaPredicted RBP11.52□□□□□ -0.57
CDH3-202ENST00000429102 CALML5Q9NZT1 146 aa11.52□□□□□ -0.57
CDH3-202ENST00000429102 ARHGEF17Q96PE2 2063 aaPredicted RBP11.51□□□□□ -0.57
CDH3-202ENST00000429102 STX11O75558 287 aa11.51□□□□□ -0.57
CDH3-202ENST00000429102 RCBTB2O95199 551 aa11.51□□□□□ -0.57
CDH3-202ENST00000429102 FRKP42685 505 aaPredicted RBP11.51□□□□□ -0.57
CDH3-202ENST00000429102 EMDP50402 254 aa11.51□□□□□ -0.57
CDH3-202ENST00000429102 PSMA6P60900 246 aaKnown RBP11.51□□□□□ -0.57
CDH3-202ENST00000429102 PPP1CAP62136 330 aa11.51□□□□□ -0.57
CDH3-202ENST00000429102 C1orf61Q13536 156 aa11.51□□□□□ -0.57
CDH3-202ENST00000429102 OR5M10Q6IEU7 315 aa11.51□□□□□ -0.57
CDH3-202ENST00000429102 VN1R4Q7Z5H5 301 aa11.51□□□□□ -0.57
CDH3-202ENST00000429102 ASPGQ86U10 573 aa11.51□□□□□ -0.57
CDH3-202ENST00000429102 MOSPD2Q8NHP6 518 aa11.51□□□□□ -0.57
CDH3-202ENST00000429102 KCTD12Q96CX2 325 aaKnown RBP11.51□□□□□ -0.57
CDH3-202ENST00000429102 LINC00615Q96LM1 132 aaPredicted RBP11.51□□□□□ -0.57
CDH3-202ENST00000429102 PRSS27Q9BQR3 290 aa11.51□□□□□ -0.57
CDH3-202ENST00000429102 TMEM168Q9H0V1 697 aa11.51□□□□□ -0.57
CDH3-202ENST00000429102 C20orf85Q9H1P6 137 aa11.51□□□□□ -0.57
CDH3-202ENST00000429102 CA10Q9NS85 328 aa11.51□□□□□ -0.57
CDH3-202ENST00000429102 A0A1B0GWA3 101 aa11.51□□□□□ -0.57
CDH3-202ENST00000429102 TSPAN11A1L157 253 aa11.51□□□□□ -0.57
CDH3-202ENST00000429102 SLC22A31A6NKX4 558 aa11.51□□□□□ -0.57
CDH3-202ENST00000429102 L7N2F9 121 aa11.51□□□□□ -0.57
CDH3-202ENST00000429102 FKTNO75072 461 aa11.51□□□□□ -0.57
CDH3-202ENST00000429102 GBX2P52951 348 aaPredicted RBP11.51□□□□□ -0.57
CDH3-202ENST00000429102 STPG1Q5TH74 334 aa11.51□□□□□ -0.57
CDH3-202ENST00000429102 NLRC3Q7RTR2 1065 aa11.51□□□□□ -0.57
CDH3-202ENST00000429102 MS4A15Q8N5U1 240 aa11.51□□□□□ -0.57
CDH3-202ENST00000429102 FGF13Q92913 245 aa11.51□□□□□ -0.57
CDH3-202ENST00000429102 NKD1Q969G9 470 aa11.51□□□□□ -0.57
CDH3-202ENST00000429102 ZNF681Q96N22 645 aa11.51□□□□□ -0.57
CDH3-202ENST00000429102 TTYH1Q9H313 450 aaPredicted RBP11.51□□□□□ -0.57
CDH3-202ENST00000429102 UBQLN2Q9UHD9 624 aa11.51□□□□□ -0.57
CDH3-202ENST00000429102 STON1Q9Y6Q2 735 aa11.51□□□□□ -0.57
CDH3-202ENST00000429102 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.5□□□□□ -0.57
CDH3-202ENST00000429102 MCIDASD6RGH6 385 aa11.5□□□□□ -0.57
CDH3-202ENST00000429102 HLA-DQA2P01906 255 aa11.5□□□□□ -0.57
CDH3-202ENST00000429102 EPXP11678 715 aa11.5□□□□□ -0.57
CDH3-202ENST00000429102 NDUFS1P28331 727 aa11.5□□□□□ -0.57
CDH3-202ENST00000429102 DEFA5Q01523 94 aa11.5□□□□□ -0.57
CDH3-202ENST00000429102 PLA2G7Q13093 441 aa11.5□□□□□ -0.57
CDH3-202ENST00000429102 ARHGAP19Q14CB8 494 aa11.5□□□□□ -0.57
CDH3-202ENST00000429102 GSG1Q2KHT4 349 aa11.5□□□□□ -0.57
CDH3-202ENST00000429102 AMZ1Q400G9 498 aa11.5□□□□□ -0.57
CDH3-202ENST00000429102 ANKRD33Q7Z3H0 272 aa11.5□□□□□ -0.57
CDH3-202ENST00000429102 TMED4Q7Z7H5 227 aa11.5□□□□□ -0.57
CDH3-202ENST00000429102 TMPRSS12Q86WS5 348 aa11.5□□□□□ -0.57
CDH3-202ENST00000429102 PRSS58Q8IYP2 241 aa11.5□□□□□ -0.57
CDH3-202ENST00000429102 OR51Q1Q8NH59 317 aa11.5□□□□□ -0.57
CDH3-202ENST00000429102 GIMAP5Q96F15 307 aa11.5□□□□□ -0.57
CDH3-202ENST00000429102 PELI1Q96FA3 418 aa11.5□□□□□ -0.57
CDH3-202ENST00000429102 HHIPL1Q96JK4 782 aa11.5□□□□□ -0.57
CDH3-202ENST00000429102 SFXN2Q96NB2 322 aa11.5□□□□□ -0.57
CDH3-202ENST00000429102 MS4A4EQ96PG1 132 aa11.5□□□□□ -0.57
CDH3-202ENST00000429102 CCDC3Q9BQI4 270 aa11.5□□□□□ -0.57
CDH3-202ENST00000429102 ADGRL4Q9HBW9 690 aa11.5□□□□□ -0.57
CDH3-202ENST00000429102 CES1P1Q9UKY3 287 aa11.5□□□□□ -0.57
CDH3-202ENST00000429102 ACSL5Q9ULC5 683 aa11.5□□□□□ -0.57
CDH3-202ENST00000429102 COPS3Q9UNS2 423 aa11.5□□□□□ -0.57
CDH3-202ENST00000429102 OR10H1Q9Y4A9 318 aa11.5□□□□□ -0.57
CDH3-202ENST00000429102 CABIN1Q9Y6J0 2220 aa11.5□□□□□ -0.57
CDH3-202ENST00000429102 B3GALT2O43825 422 aa11.5□□□□□ -0.57
CDH3-202ENST00000429102 IGHA1P01876 353 aa11.5□□□□□ -0.57
CDH3-202ENST00000429102 APOC3P02656 99 aa11.5□□□□□ -0.57
CDH3-202ENST00000429102 HSF2Q03933 536 aa11.5□□□□□ -0.57
CDH3-202ENST00000429102 DPTQ07507 201 aa11.5□□□□□ -0.57
CDH3-202ENST00000429102 TMEM35AQ53FP2 167 aa11.5□□□□□ -0.57
CDH3-202ENST00000429102 TMEM69Q5SWH9 247 aa11.5□□□□□ -0.57
CDH3-202ENST00000429102 TIGD3Q6B0B8 471 aa11.5□□□□□ -0.57
CDH3-202ENST00000429102 RTL4Q6ZR62 310 aa11.5□□□□□ -0.57
CDH3-202ENST00000429102 YAF2Q8IY57 180 aa11.5□□□□□ -0.57
CDH3-202ENST00000429102 ZDHHC1Q8WTX9 485 aa11.5□□□□□ -0.57
CDH3-202ENST00000429102 ACOT12Q8WYK0 555 aa11.5□□□□□ -0.57
CDH3-202ENST00000429102 ST8SIA2Q92186 375 aa11.5□□□□□ -0.57
CDH3-202ENST00000429102 OR1F2PQ96R84 312 aa11.5□□□□□ -0.57
CDH3-202ENST00000429102 MNTQ99583 582 aa11.5□□□□□ -0.57
CDH3-202ENST00000429102 LIN7BQ9HAP6 207 aa11.5□□□□□ -0.57
CDH3-202ENST00000429102 DLL4Q9NR61 685 aa11.5□□□□□ -0.57
CDH3-202ENST00000429102 TAS2R10Q9NYW0 307 aa11.5□□□□□ -0.57
CDH3-202ENST00000429102 TMEM72A0PK05 275 aa11.5□□□□□ -0.57
CDH3-202ENST00000429102 SPDEFO95238 335 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms