RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 IMPDH2P12268 514 aa16.27■□□□□ 0.2
PSPC1-202ENST00000427943 UQCRBP14927 111 aa16.27■□□□□ 0.2
PSPC1-202ENST00000427943 COX5AP20674 150 aa16.27■□□□□ 0.2
PSPC1-202ENST00000427943 SLC1A3P43003 542 aa16.27■□□□□ 0.2
PSPC1-202ENST00000427943 PTH2RP49190 550 aa16.27■□□□□ 0.2
PSPC1-202ENST00000427943 CLK1P49759 484 aaKnown RBP16.27■□□□□ 0.2
PSPC1-202ENST00000427943 SEZ6L2Q6UXD5 910 aa16.27■□□□□ 0.2
PSPC1-202ENST00000427943 YTHDF3Q7Z739 585 aaKnown RBP16.27■□□□□ 0.2
PSPC1-202ENST00000427943 UBE2J2Q8N2K1 259 aa16.27■□□□□ 0.2
PSPC1-202ENST00000427943 SLC38A5Q8WUX1 472 aa16.27■□□□□ 0.2
PSPC1-202ENST00000427943 HSD17B8Q92506 261 aa16.27■□□□□ 0.2
PSPC1-202ENST00000427943 PMM1Q92871 262 aa16.27■□□□□ 0.2
PSPC1-202ENST00000427943 Q96MF0 132 aa16.27■□□□□ 0.2
PSPC1-202ENST00000427943 CALML5Q9NZT1 146 aa16.27■□□□□ 0.2
PSPC1-202ENST00000427943 TMEM181Q9P2C4 612 aa16.27■□□□□ 0.2
PSPC1-202ENST00000427943 RNF115Q9Y4L5 304 aa16.27■□□□□ 0.2
PSPC1-202ENST00000427943 PCDHB14Q9Y5E9 798 aa16.27■□□□□ 0.2
PSPC1-202ENST00000427943 USF3Q68DE3 2245 aa16.27■□□□□ 0.19
PSPC1-202ENST00000427943 DNPH1O43598 174 aa16.26■□□□□ 0.19
PSPC1-202ENST00000427943 NUDT7P0C024 238 aa16.26■□□□□ 0.19
PSPC1-202ENST00000427943 FKBP2P26885 142 aaKnown RBP16.26■□□□□ 0.19
PSPC1-202ENST00000427943 ADSLP30566 484 aaPredicted RBP16.26■□□□□ 0.19
PSPC1-202ENST00000427943 MAGEA8P43361 318 aa16.26■□□□□ 0.19
PSPC1-202ENST00000427943 IDH3AP50213 366 aa16.26■□□□□ 0.19
PSPC1-202ENST00000427943 PDK3Q15120 406 aa16.26■□□□□ 0.19
PSPC1-202ENST00000427943 NCMAPQ5T1S8 102 aa16.26■□□□□ 0.19
PSPC1-202ENST00000427943 ZNF440Q8IYI8 595 aa16.26■□□□□ 0.19
PSPC1-202ENST00000427943 CADM2Q8N3J6 435 aa16.26■□□□□ 0.19
PSPC1-202ENST00000427943 ZNF611Q8N823 705 aa16.26■□□□□ 0.19
PSPC1-202ENST00000427943 TMEM171Q8WVE6 324 aa16.26■□□□□ 0.19
PSPC1-202ENST00000427943 IGFBPL1Q8WX77 278 aa16.26■□□□□ 0.19
PSPC1-202ENST00000427943 NEUROG1Q92886 237 aa16.26■□□□□ 0.19
PSPC1-202ENST00000427943 APH1AQ96BI3 265 aa16.26■□□□□ 0.19
PSPC1-202ENST00000427943 ESRP2Q9H6T0 727 aaKnown RBP16.26■□□□□ 0.19
PSPC1-202ENST00000427943 CLIC1O00299 241 aa16.25■□□□□ 0.19
PSPC1-202ENST00000427943 NR5A2O00482 541 aa16.25■□□□□ 0.19
PSPC1-202ENST00000427943 ZNF208O43345 1280 aa16.25■□□□□ 0.19
PSPC1-202ENST00000427943 RAD51DO75771 328 aa16.25■□□□□ 0.19
PSPC1-202ENST00000427943 CD3EP07766 207 aa16.25■□□□□ 0.19
PSPC1-202ENST00000427943 INHBBP09529 407 aa16.25■□□□□ 0.19
PSPC1-202ENST00000427943 PRG2P13727 222 aa16.25■□□□□ 0.19
PSPC1-202ENST00000427943 HOXB9P17482 250 aaPredicted RBP16.25■□□□□ 0.19
PSPC1-202ENST00000427943 NTF4P34130 210 aa16.25■□□□□ 0.19
PSPC1-202ENST00000427943 ACAA2P42765 397 aaKnown RBP16.25■□□□□ 0.19
PSPC1-202ENST00000427943 SLC16A1P53985 500 aa16.25■□□□□ 0.19
PSPC1-202ENST00000427943 BSPH1Q075Z2 132 aa16.25■□□□□ 0.19
PSPC1-202ENST00000427943 PPA1Q15181 289 aa16.25■□□□□ 0.19
PSPC1-202ENST00000427943 RGNQ15493 299 aa16.25■□□□□ 0.19
PSPC1-202ENST00000427943 RNF220Q5VTB9 566 aa16.25■□□□□ 0.19
PSPC1-202ENST00000427943 FBXW9Q5XUX1 488 aa16.25■□□□□ 0.19
PSPC1-202ENST00000427943 CASP12Q6UXS9 341 aa16.25■□□□□ 0.19
PSPC1-202ENST00000427943 Q71RC1 249 aaPredicted RBP16.25■□□□□ 0.19
PSPC1-202ENST00000427943 CLIP4Q8N3C7 705 aa16.25■□□□□ 0.19
PSPC1-202ENST00000427943 ZNF433Q8N7K0 673 aaPredicted RBP16.25■□□□□ 0.19
PSPC1-202ENST00000427943 KBTBD8Q8NFY9 601 aa16.25■□□□□ 0.19
PSPC1-202ENST00000427943 LILRB1Q8NHL6 650 aaPredicted RBP16.25■□□□□ 0.19
PSPC1-202ENST00000427943 DYDC1Q8WWB3 177 aa16.25■□□□□ 0.19
PSPC1-202ENST00000427943 GSX2Q9BZM3 304 aa16.25■□□□□ 0.19
PSPC1-202ENST00000427943 NGBQ9NPG2 151 aa16.25■□□□□ 0.19
PSPC1-202ENST00000427943 TRAPPC4Q9Y296 219 aa16.25■□□□□ 0.19
PSPC1-202ENST00000427943 NIPBLQ6KC79 2804 aaeCLIP16.24■□□□□ 0.191e-5■□□□□ 11.1
PSPC1-202ENST00000427943 TMEM247A6NEH6 219 aa16.24■□□□□ 0.19
PSPC1-202ENST00000427943 GPR171O14626 319 aa16.24■□□□□ 0.19
PSPC1-202ENST00000427943 THBS1P07996 1170 aa16.24■□□□□ 0.19
PSPC1-202ENST00000427943 GGT1P19440 569 aa16.24■□□□□ 0.19
PSPC1-202ENST00000427943 AQP5P55064 265 aa16.24■□□□□ 0.19
PSPC1-202ENST00000427943 SLC35A1P78382 337 aa16.24■□□□□ 0.19
PSPC1-202ENST00000427943 H3F3AP84243 136 aa16.24■□□□□ 0.19
PSPC1-202ENST00000427943 BNIP2Q12982 314 aa16.24■□□□□ 0.19
PSPC1-202ENST00000427943 LARS2Q15031 903 aaKnown RBP16.24■□□□□ 0.19
PSPC1-202ENST00000427943 ADAM5Q6NVV9 412 aa16.24■□□□□ 0.19
PSPC1-202ENST00000427943 BIVMQ86UB2 503 aa16.24■□□□□ 0.19
PSPC1-202ENST00000427943 FUNDC1Q8IVP5 155 aa16.24■□□□□ 0.19
PSPC1-202ENST00000427943 CIARTQ8N365 385 aaPredicted RBP16.24■□□□□ 0.19
PSPC1-202ENST00000427943 GOLGA6L1Q8N7Z2 621 aa16.24■□□□□ 0.19
PSPC1-202ENST00000427943 MAL2Q969L2 176 aa16.24■□□□□ 0.19
PSPC1-202ENST00000427943 POM121Q96HA1 1249 aa16.24■□□□□ 0.19
PSPC1-202ENST00000427943 USB1Q9BQ65 265 aaKnown RBP16.24■□□□□ 0.19
PSPC1-202ENST00000427943 ADAM19Q9H013 955 aa16.24■□□□□ 0.19
PSPC1-202ENST00000427943 CACYBPQ9HB71 228 aaKnown RBP16.24■□□□□ 0.19
PSPC1-202ENST00000427943 SLC25A37Q9NYZ2 338 aa16.24■□□□□ 0.19
PSPC1-202ENST00000427943 CCDC167Q9P0B6 97 aa16.24■□□□□ 0.19
PSPC1-202ENST00000427943 LAMP3Q9UQV4 416 aa16.24■□□□□ 0.19
PSPC1-202ENST00000427943 CHST2Q9Y4C5 530 aa16.24■□□□□ 0.19
PSPC1-202ENST00000427943 A0A096LPI6 279 aa16.23■□□□□ 0.19
PSPC1-202ENST00000427943 A0A0G2JPF8 293 aa16.23■□□□□ 0.19
PSPC1-202ENST00000427943 DPRXA6NFQ7 191 aa16.23■□□□□ 0.19
PSPC1-202ENST00000427943 TRIM64A6NGJ6 449 aa16.23■□□□□ 0.19
PSPC1-202ENST00000427943 TRIM64BA6NI03 449 aa16.23■□□□□ 0.19
PSPC1-202ENST00000427943 HNRNPCL2B2RXH8 293 aa16.23■□□□□ 0.19
PSPC1-202ENST00000427943 HNRNPCL3B7ZW38 293 aa16.23■□□□□ 0.19
PSPC1-202ENST00000427943 H7C1Q1 480 aa16.23■□□□□ 0.19
PSPC1-202ENST00000427943 FRS3O43559 492 aa16.23■□□□□ 0.19
PSPC1-202ENST00000427943 HNRNPCL1O60812 293 aaKnown RBP16.23■□□□□ 0.19
PSPC1-202ENST00000427943 MRPL33O75394 65 aaKnown RBP16.23■□□□□ 0.19
PSPC1-202ENST00000427943 TGDSO95455 350 aa16.23■□□□□ 0.19
PSPC1-202ENST00000427943 CNOT4O95628 575 aaKnown RBP16.23■□□□□ 0.19
PSPC1-202ENST00000427943 HNRNPCL4P0DMR1 293 aa16.23■□□□□ 0.19
PSPC1-202ENST00000427943 NCF2P19878 526 aaPredicted RBP16.23■□□□□ 0.19
PSPC1-202ENST00000427943 CXCR1P25024 350 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms