RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 PTGDR2Q9Y5Y4 395 aa10.76□□□□□ -0.69
HLA-DQB3-203ENST00000425319 HEATR5AQ86XA9 2040 aa10.75□□□□□ -0.69
HLA-DQB3-203ENST00000425319 RNF103-CHMP3A0A140T963 221 aa10.75□□□□□ -0.69
HLA-DQB3-203ENST00000425319 SMIM23A6NLE4 172 aa10.75□□□□□ -0.69
HLA-DQB3-203ENST00000425319 ZNF716A6NP11 495 aa10.75□□□□□ -0.69
HLA-DQB3-203ENST00000425319 ZNF208O43345 1280 aa10.75□□□□□ -0.69
HLA-DQB3-203ENST00000425319 FCMRO60667 390 aa10.75□□□□□ -0.69
HLA-DQB3-203ENST00000425319 DNAJA2O60884 412 aa10.75□□□□□ -0.69
HLA-DQB3-203ENST00000425319 SCN2BO60939 215 aa10.75□□□□□ -0.69
HLA-DQB3-203ENST00000425319 GPIP06744 558 aa10.75□□□□□ -0.69
HLA-DQB3-203ENST00000425319 HOXB1P14653 301 aaPredicted RBP10.75□□□□□ -0.69
HLA-DQB3-203ENST00000425319 UQCRC2P22695 453 aa10.75□□□□□ -0.69
HLA-DQB3-203ENST00000425319 CXCR1P25024 350 aa10.75□□□□□ -0.69
HLA-DQB3-203ENST00000425319 CHI3L1P36222 383 aaPredicted RBP10.75□□□□□ -0.69
HLA-DQB3-203ENST00000425319 IDH2P48735 452 aaKnown RBP10.75□□□□□ -0.69
HLA-DQB3-203ENST00000425319 POLR2HP52434 150 aaKnown RBP10.75□□□□□ -0.69
HLA-DQB3-203ENST00000425319 CHN2P52757 468 aa10.75□□□□□ -0.69
HLA-DQB3-203ENST00000425319 COPZ1P61923 177 aa10.75□□□□□ -0.69
HLA-DQB3-203ENST00000425319 KCNJ10P78508 379 aa10.75□□□□□ -0.69
HLA-DQB3-203ENST00000425319 TXNL4AP83876 142 aaKnown RBP10.75□□□□□ -0.69
HLA-DQB3-203ENST00000425319 SMU1Q2TAY7 513 aa10.75□□□□□ -0.69
HLA-DQB3-203ENST00000425319 C6orf136Q5SQH8 315 aa10.75□□□□□ -0.69
HLA-DQB3-203ENST00000425319 C9orf135Q5VTT2 229 aa10.75□□□□□ -0.69
HLA-DQB3-203ENST00000425319 SPATA19Q7Z5L4 167 aa10.75□□□□□ -0.69
HLA-DQB3-203ENST00000425319 CCDC103Q8IW40 242 aa10.75□□□□□ -0.69
HLA-DQB3-203ENST00000425319 CMIPQ8IY22 773 aa10.75□□□□□ -0.69
HLA-DQB3-203ENST00000425319 C17orf53Q8N3J3 647 aaPredicted RBP10.75□□□□□ -0.69
HLA-DQB3-203ENST00000425319 TRIML2Q8N7C3 387 aa10.75□□□□□ -0.69
HLA-DQB3-203ENST00000425319 OR4F15Q8NGB8 312 aa10.75□□□□□ -0.69
HLA-DQB3-203ENST00000425319 OR4A15Q8NGL6 344 aa10.75□□□□□ -0.69
HLA-DQB3-203ENST00000425319 NEU4Q8WWR8 484 aaPredicted RBP10.75□□□□□ -0.69
HLA-DQB3-203ENST00000425319 FOXN4Q96NZ1 517 aa10.75□□□□□ -0.69
HLA-DQB3-203ENST00000425319 KLHDC3Q9BQ90 382 aa10.75□□□□□ -0.69
HLA-DQB3-203ENST00000425319 CCDC106Q9BWC9 280 aa10.75□□□□□ -0.69
HLA-DQB3-203ENST00000425319 OR51I1Q9H343 314 aa10.75□□□□□ -0.69
HLA-DQB3-203ENST00000425319 TUBB1Q9H4B7 451 aa10.75□□□□□ -0.69
HLA-DQB3-203ENST00000425319 ARMC7Q9H6L4 198 aa10.75□□□□□ -0.69
HLA-DQB3-203ENST00000425319 TNFRSF12AQ9NP84 129 aa10.75□□□□□ -0.69
HLA-DQB3-203ENST00000425319 EXOSC3Q9NQT5 275 aaKnown RBP10.75□□□□□ -0.69
HLA-DQB3-203ENST00000425319 NOP53Q9NZM5 478 aaKnown RBP10.75□□□□□ -0.69
HLA-DQB3-203ENST00000425319 METRNQ9UJH8 293 aa10.75□□□□□ -0.69
HLA-DQB3-203ENST00000425319 COL6A5A8TX70 2615 aa10.75□□□□□ -0.69
HLA-DQB3-203ENST00000425319 A0A096LNT2 108 aa10.74□□□□□ -0.69
HLA-DQB3-203ENST00000425319 TMED7-TICAM2A0A0A6YYA0 188 aa10.74□□□□□ -0.69
HLA-DQB3-203ENST00000425319 TLDC2A0PJX2 215 aa10.74□□□□□ -0.69
HLA-DQB3-203ENST00000425319 ESPNB1AK53 854 aa10.74□□□□□ -0.69
HLA-DQB3-203ENST00000425319 RNASET2O00584 256 aaKnown RBP10.74□□□□□ -0.69
HLA-DQB3-203ENST00000425319 PDE5AO76074 875 aa10.74□□□□□ -0.69
HLA-DQB3-203ENST00000425319 VAMP5O95183 116 aa10.74□□□□□ -0.69
HLA-DQB3-203ENST00000425319 CPSF4O95639 269 aaKnown RBP10.74□□□□□ -0.69
HLA-DQB3-203ENST00000425319 ZNF23P17027 643 aa10.74□□□□□ -0.69
HLA-DQB3-203ENST00000425319 PGM1P36871 562 aa10.74□□□□□ -0.69
HLA-DQB3-203ENST00000425319 CLDN8P56748 225 aa10.74□□□□□ -0.69
HLA-DQB3-203ENST00000425319 HBA1P69905 142 aa10.74□□□□□ -0.69
HLA-DQB3-203ENST00000425319 PTGR1Q14914 329 aa10.74□□□□□ -0.69
HLA-DQB3-203ENST00000425319 GSTA3Q16772 222 aa10.74□□□□□ -0.69
HLA-DQB3-203ENST00000425319 OTUD3Q5T2D3 398 aaPredicted RBP10.74□□□□□ -0.69
HLA-DQB3-203ENST00000425319 PAQR6Q6TCH4 344 aa10.74□□□□□ -0.69
HLA-DQB3-203ENST00000425319 ADGRG3Q86Y34 549 aa10.74□□□□□ -0.69
HLA-DQB3-203ENST00000425319 ZNF440Q8IYI8 595 aa10.74□□□□□ -0.69
HLA-DQB3-203ENST00000425319 KIRREL3Q8IZU9 778 aa10.74□□□□□ -0.69
HLA-DQB3-203ENST00000425319 TEX29Q8N6K0 151 aa10.74□□□□□ -0.69
HLA-DQB3-203ENST00000425319 ARIH2OSQ8N7S6 290 aa10.74□□□□□ -0.69
HLA-DQB3-203ENST00000425319 OR52E4Q8NGH9 312 aa10.74□□□□□ -0.69
HLA-DQB3-203ENST00000425319 KIF18AQ8NI77 898 aa10.74□□□□□ -0.69
HLA-DQB3-203ENST00000425319 AGR3Q8TD06 166 aa10.74□□□□□ -0.69
HLA-DQB3-203ENST00000425319 MZB1Q8WU39 189 aa10.74□□□□□ -0.69
HLA-DQB3-203ENST00000425319 HPS1Q92902 700 aa10.74□□□□□ -0.69
HLA-DQB3-203ENST00000425319 ROPN1LQ96C74 230 aa10.74□□□□□ -0.69
HLA-DQB3-203ENST00000425319 MSI2Q96DH6 328 aaKnown RBP10.74□□□□□ -0.69
HLA-DQB3-203ENST00000425319 ANKRD27Q96NW4 1050 aa10.74□□□□□ -0.69
HLA-DQB3-203ENST00000425319 ZIM3Q96PE6 472 aa10.74□□□□□ -0.69
HLA-DQB3-203ENST00000425319 ZNF317Q96PQ6 595 aaPredicted RBP10.74□□□□□ -0.69
HLA-DQB3-203ENST00000425319 C1orf50Q9BV19 199 aa10.74□□□□□ -0.69
HLA-DQB3-203ENST00000425319 KATNB1Q9BVA0 655 aa10.74□□□□□ -0.69
HLA-DQB3-203ENST00000425319 ZNF350Q9GZX5 532 aa10.74□□□□□ -0.69
HLA-DQB3-203ENST00000425319 ADAM19Q9H013 955 aa10.74□□□□□ -0.69
HLA-DQB3-203ENST00000425319 SLC7A10Q9NS82 523 aa10.74□□□□□ -0.69
HLA-DQB3-203ENST00000425319 TMEFF2Q9UIK5 374 aaPredicted RBP10.74□□□□□ -0.69
HLA-DQB3-203ENST00000425319 TMED7Q9Y3B3 224 aa10.74□□□□□ -0.69
HLA-DQB3-203ENST00000425319 A0A0A6YYJ9 748 aa10.73□□□□□ -0.69
HLA-DQB3-203ENST00000425319 PRSS51A0A1B0GVH4 220 aa10.73□□□□□ -0.69
HLA-DQB3-203ENST00000425319 ZNF587BE7ETH6 402 aa10.73□□□□□ -0.69
HLA-DQB3-203ENST00000425319 ATP6V1G2-DDX39BF2Z307 99 aa10.73□□□□□ -0.69
HLA-DQB3-203ENST00000425319 SLCO1B7G3V0H7 640 aa10.73□□□□□ -0.69
HLA-DQB3-203ENST00000425319 SKAP2O75563 359 aaPredicted RBP10.73□□□□□ -0.69
HLA-DQB3-203ENST00000425319 ITGA5P08648 1049 aa10.73□□□□□ -0.69
HLA-DQB3-203ENST00000425319 OR12D1P0DN82 309 aa10.73□□□□□ -0.69
HLA-DQB3-203ENST00000425319 IL7RP16871 459 aa10.73□□□□□ -0.69
HLA-DQB3-203ENST00000425319 IGFBP5P24593 272 aa10.73□□□□□ -0.69
HLA-DQB3-203ENST00000425319 ALDH3A1P30838 453 aa10.73□□□□□ -0.69
HLA-DQB3-203ENST00000425319 KHKP50053 298 aa10.73□□□□□ -0.69
HLA-DQB3-203ENST00000425319 IDH3GP51553 393 aaPredicted RBP10.73□□□□□ -0.69
HLA-DQB3-203ENST00000425319 EMX2Q04743 252 aa10.73□□□□□ -0.69
HLA-DQB3-203ENST00000425319 SPOCK1Q08629 439 aa10.73□□□□□ -0.69
HLA-DQB3-203ENST00000425319 SWI5Q1ZZU3 235 aa10.73□□□□□ -0.69
HLA-DQB3-203ENST00000425319 CR1LQ2VPA4 569 aa10.73□□□□□ -0.69
HLA-DQB3-203ENST00000425319 GPAT4Q86UL3 456 aa10.73□□□□□ -0.69
HLA-DQB3-203ENST00000425319 C4orf33Q8N1A6 199 aa10.73□□□□□ -0.69
HLA-DQB3-203ENST00000425319 WDR31Q8NA23 367 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms