RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 CFAP221Q4G0U5 840 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 SPATA46Q5T0L3 261 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 ATAD3BQ5T9A4 648 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 ANKRD26P1Q6NSI1 321 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 RGS9BPQ6ZS82 235 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 BRINP3Q76B58 766 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 ERN2Q76MJ5 926 aaKnown RBP2.56□□□□□ -2
LINC01040-201ENST00000425048 CHST3Q7LGC8 479 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 TAS2R42Q7RTR8 314 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 GPR142Q7Z601 462 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 DHDDSQ86SQ9 333 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 C17orf64Q86WR6 236 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 VSIG1Q86XK7 387 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 UNC45BQ8IWX7 931 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 CLYBLQ8N0X4 340 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 CADM2Q8N3J6 435 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 TCAIMQ8N3R3 496 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 NKAIN3Q8N8D7 197 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 ASCC1Q8N9N2 400 aaKnown RBP2.56□□□□□ -2
LINC01040-201ENST00000425048 LEMD2Q8NC56 503 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 CATSPER1Q8NEC5 780 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 TEX47Q8TBZ9 253 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 ENKURQ8TC29 256 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 RAET1EQ8TD07 263 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 FAM172AQ8WUF8 416 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 UBLCP1Q8WVY7 318 aaPredicted RBP2.56□□□□□ -2
LINC01040-201ENST00000425048 CIDECQ96AQ7 238 aaPredicted RBP2.56□□□□□ -2
LINC01040-201ENST00000425048 TMIGD2Q96BF3 282 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 C12orf43Q96C57 262 aaKnown RBP2.56□□□□□ -2
LINC01040-201ENST00000425048 C11orf24Q96F05 449 aaPredicted RBP2.56□□□□□ -2
LINC01040-201ENST00000425048 RMND5BQ96G75 393 aaPredicted RBP2.56□□□□□ -2
LINC01040-201ENST00000425048 PANX3Q96QZ0 392 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 ACAT2Q9BWD1 397 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 BCL2L14Q9BZR8 327 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 OR51B5Q9H339 312 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 VPS37BQ9H9H4 285 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 Q9HAA7 133 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 UGT1A7Q9HAW7 530 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 UGT1A10Q9HAW8 530 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 UGT1A8Q9HAW9 530 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 GDAP2Q9NXN4 497 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 MRPL39Q9NYK5 338 aaKnown RBP2.56□□□□□ -2
LINC01040-201ENST00000425048 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.56□□□□□ -2
LINC01040-201ENST00000425048 EPS15L1Q9UBC2 864 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 FETUBQ9UGM5 382 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 BCAP29Q9UHQ4 241 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 ATP6V1HQ9UI12 483 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 DNAJC12Q9UKB3 198 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 GINS2Q9Y248 185 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.56□□□□□ -2
LINC01040-201ENST00000425048 GMPPBQ9Y5P6 360 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 ARHGEF10O15013 1369 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 ADAMTS12P58397 1594 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 RIMBP3CA6NJZ7 1639 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 RIMBP3BA6NNM3 1639 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 PHRF1Q9P1Y6 1649 aaKnown RBP2.56□□□□□ -2
LINC01040-201ENST00000425048 CAMTA1Q9Y6Y1 1673 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 LAMB4A4D0S4 1761 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 RGPD8O14715 1765 aaPredicted RBP2.56□□□□□ -2
LINC01040-201ENST00000425048 RGPD5Q99666 1765 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 TMEM120BA0PK00 339 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 TRPC5OSA6NMA1 111 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 C12orf71A8MTZ7 269 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 EVPLLA8MZ36 301 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 LINC00587B1AMM8 73 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 G3V3Y1 287 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 J3QRK9 145 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 K7ERI5 159 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 PSMD12O00232 456 aaPredicted RBP2.55□□□□□ -2
LINC01040-201ENST00000425048 RAD51BO15315 384 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 RGS16O15492 202 aaPredicted RBP2.55□□□□□ -2
LINC01040-201ENST00000425048 KIF1BO60333 1816 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 TOM1O60784 492 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 SLIT3O75094 1523 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 CLUHO75153 1309 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 SNAPINO95295 136 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 TNFAIP8O95379 198 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 NPPAP01160 153 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 IGHV3-23P01764 117 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 DNAJB1P25685 340 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 PSMA5P28066 241 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 RRM2P31350 389 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 CYLC1P35663 651 aaPredicted RBP2.55□□□□□ -2
LINC01040-201ENST00000425048 PMELP40967 661 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 CASP3P42574 277 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 POU3F4P49335 361 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 AP1S2P56377 157 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 PFN3P60673 137 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 TNNC1P63316 161 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 CDK16Q00536 496 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 KLRC3Q07444 240 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 MGAT3Q09327 533 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 SELPLGQ14242 412 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 NCAPD2Q15021 1401 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 CDK10Q15131 360 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 SLC15A2Q16348 729 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 KYNUQ16719 465 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 CDO1Q16878 200 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 TRMT5Q32P41 509 aaKnown RBP2.55□□□□□ -2
LINC01040-201ENST00000425048 PLCH1Q4KWH8 1693 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms