RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 RPS4Y1P22090 263 aaKnown RBP13.46□□□□□ -0.25
USB1-202ENST00000423271 IL32P24001 234 aa13.46□□□□□ -0.25
USB1-202ENST00000423271 APOBEC1P41238 236 aaKnown RBP13.46□□□□□ -0.25
USB1-202ENST00000423271 OR3A2P47893 321 aa13.46□□□□□ -0.25
USB1-202ENST00000423271 IDH2P48735 452 aaKnown RBP13.46□□□□□ -0.25
USB1-202ENST00000423271 NR1H2P55055 460 aa13.46□□□□□ -0.25
USB1-202ENST00000423271 SHEQ5VZ18 495 aa13.46□□□□□ -0.25
USB1-202ENST00000423271 DLEU7Q6UYE1 221 aa13.46□□□□□ -0.25
USB1-202ENST00000423271 LRRC74BQ6ZQY2 392 aa13.46□□□□□ -0.25
USB1-202ENST00000423271 GRINAQ7Z429 371 aa13.46□□□□□ -0.25
USB1-202ENST00000423271 DHDDSQ86SQ9 333 aa13.46□□□□□ -0.25
USB1-202ENST00000423271 ATG4DQ86TL0 474 aaPredicted RBP13.46□□□□□ -0.25
USB1-202ENST00000423271 MTDHQ86UE4 582 aaKnown RBP13.46□□□□□ -0.25
USB1-202ENST00000423271 SNX32Q86XE0 403 aa13.46□□□□□ -0.25
USB1-202ENST00000423271 ADGRG3Q86Y34 549 aa13.46□□□□□ -0.25
USB1-202ENST00000423271 P3H2Q8IVL5 708 aa13.46□□□□□ -0.25
USB1-202ENST00000423271 LRRC75A-AS1Q8N1F1 130 aa13.46□□□□□ -0.25
USB1-202ENST00000423271 DPP10Q8N608 796 aa13.46□□□□□ -0.25
USB1-202ENST00000423271 SLC25A43Q8WUT9 341 aaPredicted RBP13.46□□□□□ -0.25
USB1-202ENST00000423271 PERPQ96FX8 193 aa13.46□□□□□ -0.25
USB1-202ENST00000423271 SMR3AQ99954 134 aa13.46□□□□□ -0.25
USB1-202ENST00000423271 TACO1Q9BSH4 297 aaKnown RBP13.46□□□□□ -0.25
USB1-202ENST00000423271 TMEM204Q9BSN7 226 aa13.46□□□□□ -0.25
USB1-202ENST00000423271 VAPAQ9P0L0 249 aa13.46□□□□□ -0.25
USB1-202ENST00000423271 CHRNA9Q9UGM1 479 aa13.46□□□□□ -0.25
USB1-202ENST00000423271 LIPT1Q9Y234 373 aa13.46□□□□□ -0.25
USB1-202ENST00000423271 CLIC1O00299 241 aa13.45□□□□□ -0.26
USB1-202ENST00000423271 SLC22A2O15244 555 aa13.45□□□□□ -0.26
USB1-202ENST00000423271 LYZL6O75951 148 aa13.45□□□□□ -0.26
USB1-202ENST00000423271 NR2F1P10589 423 aa13.45□□□□□ -0.26
USB1-202ENST00000423271 CCNA2P20248 432 aa13.45□□□□□ -0.26
USB1-202ENST00000423271 ADSLP30566 484 aaPredicted RBP13.45□□□□□ -0.26
USB1-202ENST00000423271 CRATP43155 626 aa13.45□□□□□ -0.26
USB1-202ENST00000423271 ANXA11P50995 505 aaKnown RBP13.45□□□□□ -0.26
USB1-202ENST00000423271 DSTNP60981 165 aa13.45□□□□□ -0.26
USB1-202ENST00000423271 CSNK2A1P68400 391 aaPredicted RBP13.45□□□□□ -0.26
USB1-202ENST00000423271 TXNL4AP83876 142 aaKnown RBP13.45□□□□□ -0.26
USB1-202ENST00000423271 NFYCQ13952 458 aa13.45□□□□□ -0.26
USB1-202ENST00000423271 MAPRE2Q15555 327 aa13.45□□□□□ -0.26
USB1-202ENST00000423271 TAB1Q15750 504 aa13.45□□□□□ -0.26
USB1-202ENST00000423271 SEZ6L2Q6UXD5 910 aa13.45□□□□□ -0.26
USB1-202ENST00000423271 PIGWQ7Z7B1 504 aa13.45□□□□□ -0.26
USB1-202ENST00000423271 WDR60Q8WVS4 1066 aa13.45□□□□□ -0.26
USB1-202ENST00000423271 IGFBPL1Q8WX77 278 aa13.45□□□□□ -0.26
USB1-202ENST00000423271 KISS1RQ969F8 398 aaPredicted RBP13.45□□□□□ -0.26
USB1-202ENST00000423271 HDHD5Q9BXW7 423 aa13.45□□□□□ -0.26
USB1-202ENST00000423271 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.45□□□□□ -0.26
USB1-202ENST00000423271 SPIN1Q9Y657 262 aaPredicted RBP13.45□□□□□ -0.26
USB1-202ENST00000423271 LOC100653049A0A140TA62 436 aa13.44□□□□□ -0.26
USB1-202ENST00000423271 ZNF716A6NP11 495 aa13.44□□□□□ -0.26
USB1-202ENST00000423271 ZNF724A8MTY0 619 aa13.44□□□□□ -0.26
USB1-202ENST00000423271 ARHGEF9O43307 516 aa13.44□□□□□ -0.26
USB1-202ENST00000423271 RAMP1O60894 148 aa13.44□□□□□ -0.26
USB1-202ENST00000423271 KRT34O76011 436 aa13.44□□□□□ -0.26
USB1-202ENST00000423271 MAGEA8P43361 318 aa13.44□□□□□ -0.26
USB1-202ENST00000423271 ITGADQ13349 1161 aa13.44□□□□□ -0.26
USB1-202ENST00000423271 P2RY6Q15077 328 aa13.44□□□□□ -0.26
USB1-202ENST00000423271 RGNQ15493 299 aa13.44□□□□□ -0.26
USB1-202ENST00000423271 MRPL2Q5T653 305 aaKnown RBP13.44□□□□□ -0.26
USB1-202ENST00000423271 REP15Q6BDI9 236 aa13.44□□□□□ -0.26
USB1-202ENST00000423271 Q6ZT83 130 aa13.44□□□□□ -0.26
USB1-202ENST00000423271 BHLHA15Q7RTS1 189 aaPredicted RBP13.44□□□□□ -0.26
USB1-202ENST00000423271 CMIPQ8IY22 773 aa13.44□□□□□ -0.26
USB1-202ENST00000423271 POU5F2Q8N7G0 328 aa13.44□□□□□ -0.26
USB1-202ENST00000423271 POM121Q96HA1 1249 aa13.44□□□□□ -0.26
USB1-202ENST00000423271 C18orf12Q96KH6 178 aa13.44□□□□□ -0.26
USB1-202ENST00000423271 CCT8L2Q96SF2 557 aa13.44□□□□□ -0.26
USB1-202ENST00000423271 CPPED1Q9BRF8 314 aaPredicted RBP13.44□□□□□ -0.26
USB1-202ENST00000423271 POTEKPQ9BYX7 375 aa13.44□□□□□ -0.26
USB1-202ENST00000423271 MYLK2Q9H1R3 596 aa13.44□□□□□ -0.26
USB1-202ENST00000423271 IKZF5Q9H5V7 419 aa13.44□□□□□ -0.26
USB1-202ENST00000423271 ADAM21Q9UKJ8 722 aa13.44□□□□□ -0.26
USB1-202ENST00000423271 TLN2Q9Y4G6 2542 aa13.44□□□□□ -0.26
USB1-202ENST00000423271 NSD1Q96L73 2696 aaPredicted RBP13.44□□□□□ -0.26
USB1-202ENST00000423271 IGKV3D-15A0A087WSY6 115 aa13.43□□□□□ -0.26
USB1-202ENST00000423271 TMED7-TICAM2A0A0A6YYA0 188 aa13.43□□□□□ -0.26
USB1-202ENST00000423271 TMEM72A0PK05 275 aa13.43□□□□□ -0.26
USB1-202ENST00000423271 HS3ST1O14792 307 aa13.43□□□□□ -0.26
USB1-202ENST00000423271 MRASO14807 208 aa13.43□□□□□ -0.26
USB1-202ENST00000423271 SHOX2O60902 331 aaPredicted RBP13.43□□□□□ -0.26
USB1-202ENST00000423271 PMS2P2O95744 297 aa13.43□□□□□ -0.26
USB1-202ENST00000423271 IGHV3-9P01782 118 aa13.43□□□□□ -0.26
USB1-202ENST00000423271 DBIP07108 87 aaKnown RBP13.43□□□□□ -0.26
USB1-202ENST00000423271 NUDT7P0C024 238 aa13.43□□□□□ -0.26
USB1-202ENST00000423271 IL7RP16871 459 aa13.43□□□□□ -0.26
USB1-202ENST00000423271 IGHV1-2P23083 117 aa13.43□□□□□ -0.26
USB1-202ENST00000423271 PPIBP23284 216 aaKnown RBP13.43□□□□□ -0.26
USB1-202ENST00000423271 TACR3P29371 465 aa13.43□□□□□ -0.26
USB1-202ENST00000423271 EPS8Q12929 822 aa13.43□□□□□ -0.26
USB1-202ENST00000423271 CAPRIN1Q14444 709 aaKnown RBP13.43□□□□□ -0.26
USB1-202ENST00000423271 MMEL1Q495T6 779 aa13.43□□□□□ -0.26
USB1-202ENST00000423271 RUNDC3AQ59EK9 446 aa13.43□□□□□ -0.26
USB1-202ENST00000423271 RPS26P11Q5JNZ5 115 aaPredicted RBP13.43□□□□□ -0.26
USB1-202ENST00000423271 ZNF836Q6ZNA1 936 aa13.43□□□□□ -0.26
USB1-202ENST00000423271 YTHDF3Q7Z739 585 aaKnown RBP13.43□□□□□ -0.26
USB1-202ENST00000423271 GALNT5Q7Z7M9 940 aa13.43□□□□□ -0.26
USB1-202ENST00000423271 VRK2Q86Y07 508 aa13.43□□□□□ -0.26
USB1-202ENST00000423271 TREML1Q86YW5 311 aa13.43□□□□□ -0.26
USB1-202ENST00000423271 C10orf111Q8N326 155 aa13.43□□□□□ -0.26
USB1-202ENST00000423271 CIARTQ8N365 385 aaPredicted RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms