RNA–Protein interactions for RNA: ENST00000422245.5

SQSTM1-203, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-203ENST00000422245 SLC35A1P78382 337 aa10.19□□□□□ -0.78
SQSTM1-203ENST00000422245 FAPQ12884 760 aa10.19□□□□□ -0.78
SQSTM1-203ENST00000422245 SYPL1Q16563 259 aa10.19□□□□□ -0.78
SQSTM1-203ENST00000422245 KLHL17Q6TDP4 642 aa10.19□□□□□ -0.78
SQSTM1-203ENST00000422245 TMEM108Q6UXF1 575 aa10.19□□□□□ -0.78
SQSTM1-203ENST00000422245 HMGN2P46Q86SG4 172 aa10.19□□□□□ -0.78
SQSTM1-203ENST00000422245 ADGRG3Q86Y34 549 aa10.19□□□□□ -0.78
SQSTM1-203ENST00000422245 ZNF440Q8IYI8 595 aa10.19□□□□□ -0.78
SQSTM1-203ENST00000422245 ANKRD42Q8N9B4 389 aa10.19□□□□□ -0.78
SQSTM1-203ENST00000422245 CNOT9Q92600 299 aaKnown RBP10.19□□□□□ -0.78
SQSTM1-203ENST00000422245 ZG16BQ96DA0 208 aa10.19□□□□□ -0.78
SQSTM1-203ENST00000422245 TEX37Q96LM6 180 aa10.19□□□□□ -0.78
SQSTM1-203ENST00000422245 HS6ST2Q96MM7 605 aa10.19□□□□□ -0.78
SQSTM1-203ENST00000422245 OR52E6Q96RD3 313 aa10.19□□□□□ -0.78
SQSTM1-203ENST00000422245 PAIP2Q9BPZ3 127 aaKnown RBP10.19□□□□□ -0.78
SQSTM1-203ENST00000422245 SLCO5A1Q9H2Y9 848 aa10.19□□□□□ -0.78
SQSTM1-203ENST00000422245 ASB6Q9NWX5 421 aa10.19□□□□□ -0.78
SQSTM1-203ENST00000422245 TAS2R16Q9NYV7 291 aa10.19□□□□□ -0.78
SQSTM1-203ENST00000422245 CISD1Q9NZ45 108 aaKnown RBP10.19□□□□□ -0.78
SQSTM1-203ENST00000422245 NPAP1Q9NZP6 1156 aa10.19□□□□□ -0.78
SQSTM1-203ENST00000422245 TMEM181Q9P2C4 612 aa10.19□□□□□ -0.78
SQSTM1-203ENST00000422245 OSGIN1Q9UJX0 560 aa10.19□□□□□ -0.78
SQSTM1-203ENST00000422245 PRDM4Q9UKN5 801 aa10.19□□□□□ -0.78
SQSTM1-203ENST00000422245 MGAT4BQ9UQ53 548 aa10.19□□□□□ -0.78
SQSTM1-203ENST00000422245 SLC9A8Q9Y2E8 581 aa10.19□□□□□ -0.78
SQSTM1-203ENST00000422245 TMED7Q9Y3B3 224 aa10.19□□□□□ -0.78
SQSTM1-203ENST00000422245 CIB4A0PJX0 185 aa10.18□□□□□ -0.78
SQSTM1-203ENST00000422245 CFAP73A6NFT4 308 aa10.18□□□□□ -0.78
SQSTM1-203ENST00000422245 CCT8L1PA6NM43 557 aa10.18□□□□□ -0.78
SQSTM1-203ENST00000422245 SLCO1B7G3V0H7 640 aa10.18□□□□□ -0.78
SQSTM1-203ENST00000422245 RFXANKO14593 260 aa10.18□□□□□ -0.78
SQSTM1-203ENST00000422245 AP3D1O14617 1153 aa10.18□□□□□ -0.78
SQSTM1-203ENST00000422245 SNNO75324 88 aaPredicted RBP10.18□□□□□ -0.78
SQSTM1-203ENST00000422245 IGHV4-39P01824 125 aa10.18□□□□□ -0.78
SQSTM1-203ENST00000422245 IL6P05231 212 aa10.18□□□□□ -0.78
SQSTM1-203ENST00000422245 THBS1P07996 1170 aa10.18□□□□□ -0.78
SQSTM1-203ENST00000422245 NR2F1P10589 423 aa10.18□□□□□ -0.78
SQSTM1-203ENST00000422245 IDO1P14902 403 aa10.18□□□□□ -0.78
SQSTM1-203ENST00000422245 IL7RP16871 459 aa10.18□□□□□ -0.78
SQSTM1-203ENST00000422245 CCNA2P20248 432 aa10.18□□□□□ -0.78
SQSTM1-203ENST00000422245 PTAFRP25105 342 aa10.18□□□□□ -0.78
SQSTM1-203ENST00000422245 EPHA3P29320 983 aa10.18□□□□□ -0.78
SQSTM1-203ENST00000422245 TACR3P29371 465 aa10.18□□□□□ -0.78
SQSTM1-203ENST00000422245 IL12AP29459 219 aa10.18□□□□□ -0.78
SQSTM1-203ENST00000422245 CDKN2CP42773 168 aa10.18□□□□□ -0.78
SQSTM1-203ENST00000422245 SLC1A3P43003 542 aa10.18□□□□□ -0.78
SQSTM1-203ENST00000422245 H3F3AP84243 136 aa10.18□□□□□ -0.78
SQSTM1-203ENST00000422245 DMTNQ08495 405 aa10.18□□□□□ -0.78
SQSTM1-203ENST00000422245 EPS8Q12929 822 aa10.18□□□□□ -0.78
SQSTM1-203ENST00000422245 NRF1Q16656 503 aa10.18□□□□□ -0.78
SQSTM1-203ENST00000422245 LIN52Q52LA3 116 aa10.18□□□□□ -0.78
SQSTM1-203ENST00000422245 MRPL2Q5T653 305 aaKnown RBP10.18□□□□□ -0.78
SQSTM1-203ENST00000422245 C1QTNF12Q5T7M4 302 aa10.18□□□□□ -0.78
SQSTM1-203ENST00000422245 OR7E24Q6IFN5 339 aa10.18□□□□□ -0.78
SQSTM1-203ENST00000422245 CASP12Q6UXS9 341 aa10.18□□□□□ -0.78
SQSTM1-203ENST00000422245 ZNF621Q6ZSS3 439 aa10.18□□□□□ -0.78
SQSTM1-203ENST00000422245 PEX5LQ8IYB4 626 aa10.18□□□□□ -0.78
SQSTM1-203ENST00000422245 C17orf78Q8N4C9 275 aa10.18□□□□□ -0.78
SQSTM1-203ENST00000422245 C1orf162Q8NEQ5 155 aaPredicted RBP10.18□□□□□ -0.78
SQSTM1-203ENST00000422245 NAA11Q9BSU3 229 aaPredicted RBP10.18□□□□□ -0.78
SQSTM1-203ENST00000422245 INPP5KQ9BT40 448 aa10.18□□□□□ -0.78
SQSTM1-203ENST00000422245 MTHFD2LQ9H903 347 aaPredicted RBP10.18□□□□□ -0.78
SQSTM1-203ENST00000422245 THAP1Q9NVV9 213 aa10.18□□□□□ -0.78
SQSTM1-203ENST00000422245 PARPBPQ9NWS1 579 aa10.18□□□□□ -0.78
SQSTM1-203ENST00000422245 CALML5Q9NZT1 146 aa10.18□□□□□ -0.78
SQSTM1-203ENST00000422245 P2RX2Q9UBL9 471 aa10.18□□□□□ -0.78
SQSTM1-203ENST00000422245 GPR45Q9Y5Y3 372 aa10.18□□□□□ -0.78
SQSTM1-203ENST00000422245 DNHD1Q96M86 4753 aa10.18□□□□□ -0.78
SQSTM1-203ENST00000422245 DSPPQ9NZW4 1301 aa10.17□□□□□ -0.78
SQSTM1-203ENST00000422245 TMEM120BA0PK00 339 aa10.17□□□□□ -0.78
SQSTM1-203ENST00000422245 TMEM72A0PK05 275 aa10.17□□□□□ -0.78
SQSTM1-203ENST00000422245 RNF223E7ERA6 249 aa10.17□□□□□ -0.78
SQSTM1-203ENST00000422245 RAMP1O60894 148 aa10.17□□□□□ -0.78
SQSTM1-203ENST00000422245 C1QCP02747 245 aa10.17□□□□□ -0.78
SQSTM1-203ENST00000422245 GSNP06396 782 aa10.17□□□□□ -0.78
SQSTM1-203ENST00000422245 KRTAP1-1Q07627 177 aa10.17□□□□□ -0.78
SQSTM1-203ENST00000422245 GSTA3Q16772 222 aa10.17□□□□□ -0.78
SQSTM1-203ENST00000422245 PDCD4Q53EL6 469 aaKnown RBP10.17□□□□□ -0.78
SQSTM1-203ENST00000422245 COX20Q5RI15 118 aa10.17□□□□□ -0.78
SQSTM1-203ENST00000422245 AGAP6Q5VW22 663 aa10.17□□□□□ -0.78
SQSTM1-203ENST00000422245 ATG16L1Q676U5 607 aa10.17□□□□□ -0.78
SQSTM1-203ENST00000422245 PAQR6Q6TCH4 344 aa10.17□□□□□ -0.78
SQSTM1-203ENST00000422245 MSANTD1Q6ZTZ1 278 aa10.17□□□□□ -0.78
SQSTM1-203ENST00000422245 PRIMA1Q86XR5 153 aa10.17□□□□□ -0.78
SQSTM1-203ENST00000422245 CCDC103Q8IW40 242 aa10.17□□□□□ -0.78
SQSTM1-203ENST00000422245 OR52N5Q8NH56 324 aa10.17□□□□□ -0.78
SQSTM1-203ENST00000422245 PNPT1Q8TCS8 783 aaKnown RBP10.17□□□□□ -0.78
SQSTM1-203ENST00000422245 TMEM45BQ96B21 275 aa10.17□□□□□ -0.78
SQSTM1-203ENST00000422245 DNAJA3Q96EY1 480 aa10.17□□□□□ -0.78
SQSTM1-203ENST00000422245 REG4Q9BYZ8 158 aa10.17□□□□□ -0.78
SQSTM1-203ENST00000422245 AMBRA1Q9C0C7 1298 aa10.17□□□□□ -0.78
SQSTM1-203ENST00000422245 WDR55Q9H6Y2 383 aaPredicted RBP10.17□□□□□ -0.78
SQSTM1-203ENST00000422245 DCTN4Q9UJW0 460 aa10.17□□□□□ -0.78
SQSTM1-203ENST00000422245 FLVCR1Q9Y5Y0 555 aa10.17□□□□□ -0.78
SQSTM1-203ENST00000422245 SLC25A15Q9Y619 301 aa10.17□□□□□ -0.78
SQSTM1-203ENST00000422245 SONP18583 2426 aaKnown RBP10.17□□□□□ -0.78
SQSTM1-203ENST00000422245 CDHR4A6H8M9 788 aa10.16□□□□□ -0.78
SQSTM1-203ENST00000422245 PDLIM1O00151 329 aa10.16□□□□□ -0.78
SQSTM1-203ENST00000422245 SLC22A3O75751 556 aa10.16□□□□□ -0.78
SQSTM1-203ENST00000422245 CD8AP01732 235 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms