RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 KDM4EB2RXH2 506 aaPredicted RBP19.08■□□□□ 0.64
GPC1-202ENST00000420138 MASP2O00187 686 aa19.08■□□□□ 0.64
GPC1-202ENST00000420138 IGHEP01854 428 aa19.08■□□□□ 0.64
GPC1-202ENST00000420138 ITPKBP27987 946 aa19.08■□□□□ 0.64
GPC1-202ENST00000420138 ENTPD1P49961 510 aa19.08■□□□□ 0.64
GPC1-202ENST00000420138 NOVA1P51513 510 aaKnown RBP19.08■□□□□ 0.64
GPC1-202ENST00000420138 NTRK2Q16620 822 aa19.08■□□□□ 0.64
GPC1-202ENST00000420138 BICRALQ6AI39 1079 aa19.08■□□□□ 0.64
GPC1-202ENST00000420138 MISPQ8IVT2 679 aa19.08■□□□□ 0.64
GPC1-202ENST00000420138 CACTIN-AS1Q8N1I8 211 aa19.08■□□□□ 0.64
GPC1-202ENST00000420138 B4GALNT2Q8NHY0 566 aa19.08■□□□□ 0.64
GPC1-202ENST00000420138 SLC22A8Q8TCC7 542 aa19.08■□□□□ 0.64
GPC1-202ENST00000420138 OSGIN1Q9UJX0 560 aa19.08■□□□□ 0.64
GPC1-202ENST00000420138 A0A1B0GVG6 124 aa19.07■□□□□ 0.64
GPC1-202ENST00000420138 C2orf72A6NCS6 295 aa19.07■□□□□ 0.64
GPC1-202ENST00000420138 TERTO14746 1132 aaKnown RBP19.07■□□□□ 0.64
GPC1-202ENST00000420138 BMP7P18075 431 aa19.07■□□□□ 0.64
GPC1-202ENST00000420138 PGCP20142 388 aa19.07■□□□□ 0.64
GPC1-202ENST00000420138 CBFBQ13951 182 aa19.07■□□□□ 0.64
GPC1-202ENST00000420138 MOGQ16653 247 aa19.07■□□□□ 0.64
GPC1-202ENST00000420138 ZNF791Q3KP31 576 aaPredicted RBP19.07■□□□□ 0.64
GPC1-202ENST00000420138 TMPRSS12Q86WS5 348 aa19.07■□□□□ 0.64
GPC1-202ENST00000420138 OR10G3Q8NGC4 313 aa19.07■□□□□ 0.64
GPC1-202ENST00000420138 CDCA4Q9BXL8 241 aa19.07■□□□□ 0.64
GPC1-202ENST00000420138 PRRG3Q9BZD7 231 aa19.07■□□□□ 0.64
GPC1-202ENST00000420138 ZNF160Q9HCG1 818 aa19.07■□□□□ 0.64
GPC1-202ENST00000420138 TAS2R16Q9NYV7 291 aa19.07■□□□□ 0.64
GPC1-202ENST00000420138 RPL36Q9Y3U8 105 aaKnown RBP19.07■□□□□ 0.64
GPC1-202ENST00000420138 KNTC1P50748 2209 aa19.07■□□□□ 0.64
GPC1-202ENST00000420138 NSG1A0A0A6YYJ2 146 aa19.07■□□□□ 0.64
GPC1-202ENST00000420138 CLPXO76031 633 aa19.07■□□□□ 0.64
GPC1-202ENST00000420138 TNFSF15O95150 251 aa19.07■□□□□ 0.64
GPC1-202ENST00000420138 HMGN1P05114 100 aa19.07■□□□□ 0.64
GPC1-202ENST00000420138 F8A1P23610 371 aa19.07■□□□□ 0.64
GPC1-202ENST00000420138 GRK5P34947 590 aa19.07■□□□□ 0.64
GPC1-202ENST00000420138 COL28A1Q2UY09 1125 aa19.07■□□□□ 0.64
GPC1-202ENST00000420138 ZNF362Q5T0B9 420 aaPredicted RBP19.07■□□□□ 0.64
GPC1-202ENST00000420138 CROCCP3Q8IVE0 287 aa19.07■□□□□ 0.64
GPC1-202ENST00000420138 SLC15A4Q8N697 577 aa19.07■□□□□ 0.64
GPC1-202ENST00000420138 ANKK1Q8NFD2 765 aa19.07■□□□□ 0.64
GPC1-202ENST00000420138 OR52L1Q8NGH7 329 aa19.07■□□□□ 0.64
GPC1-202ENST00000420138 LIPHQ8WWY8 451 aa19.07■□□□□ 0.64
GPC1-202ENST00000420138 SPACA9Q96E40 222 aaPredicted RBP19.07■□□□□ 0.64
GPC1-202ENST00000420138 PRODHO43272 600 aa19.06■□□□□ 0.64
GPC1-202ENST00000420138 CDC40O60508 579 aaKnown RBP eCLIP19.06■□□□□ 0.64
GPC1-202ENST00000420138 ITGA10O75578 1167 aa19.06■□□□□ 0.64
GPC1-202ENST00000420138 OR7A10O76100 309 aa19.06■□□□□ 0.64
GPC1-202ENST00000420138 CD36P16671 472 aa19.06■□□□□ 0.64
GPC1-202ENST00000420138 CALRP27797 417 aaKnown RBP19.06■□□□□ 0.64
GPC1-202ENST00000420138 TMED10P49755 219 aaKnown RBP19.06■□□□□ 0.64
GPC1-202ENST00000420138 LTBQ06643 244 aa19.06■□□□□ 0.64
GPC1-202ENST00000420138 C17orf67Q0P5P2 114 aa19.06■□□□□ 0.64
GPC1-202ENST00000420138 SSPNQ14714 243 aa19.06■□□□□ 0.64
GPC1-202ENST00000420138 QPRTQ15274 297 aa19.06■□□□□ 0.64
GPC1-202ENST00000420138 OR5M10Q6IEU7 315 aa19.06■□□□□ 0.64
GPC1-202ENST00000420138 RTL4Q6ZR62 310 aa19.06■□□□□ 0.64
GPC1-202ENST00000420138 C9orf43Q8TAL5 461 aaPredicted RBP19.06■□□□□ 0.64
GPC1-202ENST00000420138 CRELD1Q96HD1 420 aa19.06■□□□□ 0.64
GPC1-202ENST00000420138 MRPS18AQ9NVS2 196 aaKnown RBP19.06■□□□□ 0.64
GPC1-202ENST00000420138 FAM186AA6NE01 2351 aa19.05■□□□□ 0.64
GPC1-202ENST00000420138 HTR3EA5X5Y0 456 aa19.05■□□□□ 0.64
GPC1-202ENST00000420138 TGFBR2P37173 567 aa19.05■□□□□ 0.64
GPC1-202ENST00000420138 SOX3P41225 446 aa19.05■□□□□ 0.64
GPC1-202ENST00000420138 SLC9A3P48764 834 aa19.05■□□□□ 0.64
GPC1-202ENST00000420138 RPS4XP62701 263 aaKnown RBP19.05■□□□□ 0.64
GPC1-202ENST00000420138 FOXK2Q01167 660 aa19.05■□□□□ 0.64
GPC1-202ENST00000420138 ZNF74Q16587 644 aa19.05■□□□□ 0.64
GPC1-202ENST00000420138 ARMC10Q8N2F6 343 aa19.05■□□□□ 0.64
GPC1-202ENST00000420138 KTI12Q96EK9 354 aaPredicted RBP19.05■□□□□ 0.64
GPC1-202ENST00000420138 IFT27Q9BW83 186 aa19.05■□□□□ 0.64
GPC1-202ENST00000420138 OCEL1Q9H607 264 aa19.05■□□□□ 0.64
GPC1-202ENST00000420138 HINT3Q9NQE9 182 aaKnown RBP19.05■□□□□ 0.64
GPC1-202ENST00000420138 EXPH5Q8NEV8 1989 aa19.05■□□□□ 0.64
GPC1-202ENST00000420138 NUDT14O95848 222 aa19.04■□□□□ 0.64
GPC1-202ENST00000420138 PTHP01270 115 aa19.04■□□□□ 0.64
GPC1-202ENST00000420138 INHBBP09529 407 aa19.04■□□□□ 0.64
GPC1-202ENST00000420138 ADORA3P0DMS8 318 aa19.04■□□□□ 0.64
GPC1-202ENST00000420138 OTX2P32243 289 aa19.04■□□□□ 0.64
GPC1-202ENST00000420138 Q0VFX4 171 aa19.04■□□□□ 0.64
GPC1-202ENST00000420138 DOC2BQ14184 412 aa19.04■□□□□ 0.64
GPC1-202ENST00000420138 SLC35F1Q5T1Q4 408 aa19.04■□□□□ 0.64
GPC1-202ENST00000420138 SLC43A2Q8N370 569 aa19.04■□□□□ 0.64
GPC1-202ENST00000420138 ESX1Q8N693 406 aa19.04■□□□□ 0.64
GPC1-202ENST00000420138 BBS1Q8NFJ9 593 aa19.04■□□□□ 0.64
GPC1-202ENST00000420138 MOGAT1Q96PD6 335 aa19.04■□□□□ 0.64
GPC1-202ENST00000420138 TEX12Q9BXU0 123 aa19.04■□□□□ 0.64
GPC1-202ENST00000420138 TAS2R10Q9NYW0 307 aa19.04■□□□□ 0.64
GPC1-202ENST00000420138 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP19.04■□□□□ 0.64
GPC1-202ENST00000420138 PCSK5Q92824 1860 aa19.04■□□□□ 0.64
GPC1-202ENST00000420138 M0R082 166 aa19.04■□□□□ 0.64
GPC1-202ENST00000420138 GP1BBP13224 206 aa19.04■□□□□ 0.64
GPC1-202ENST00000420138 TIGD6Q17RP2 521 aa19.04■□□□□ 0.64
GPC1-202ENST00000420138 ZNF829Q3KNS6 432 aaPredicted RBP19.04■□□□□ 0.64
GPC1-202ENST00000420138 FCRLBQ6BAA4 426 aa19.04■□□□□ 0.64
GPC1-202ENST00000420138 MARCH9Q86YJ5 346 aa19.04■□□□□ 0.64
GPC1-202ENST00000420138 CYP4Z2PQ8N1L4 340 aa19.04■□□□□ 0.64
GPC1-202ENST00000420138 NPAS1Q99742 590 aa19.04■□□□□ 0.64
GPC1-202ENST00000420138 CMC2Q9NRP2 79 aa19.04■□□□□ 0.64
GPC1-202ENST00000420138 ZNF337Q9Y3M9 751 aa19.04■□□□□ 0.64
GPC1-202ENST00000420138 CHCHD2Q9Y6H1 151 aaPredicted RBP19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms