RNA–Protein interactions for RNA: ENST00000417876.1

RFC4-204, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-204ENST00000417876 CALN1Q9BXU9 219 aa4.38□□□□□ -1.71
RFC4-204ENST00000417876 TRIM15Q9C019 465 aa4.38□□□□□ -1.71
RFC4-204ENST00000417876 ELOVL4Q9GZR5 314 aa4.38□□□□□ -1.71
RFC4-204ENST00000417876 POLR3FQ9H1D9 316 aaPredicted RBP4.38□□□□□ -1.71
RFC4-204ENST00000417876 MTIF3Q9H2K0 278 aaKnown RBP4.38□□□□□ -1.71
RFC4-204ENST00000417876 DPEP3Q9H4B8 488 aa4.38□□□□□ -1.71
RFC4-204ENST00000417876 FNDC4Q9H6D8 234 aaPredicted RBP4.38□□□□□ -1.71
RFC4-204ENST00000417876 CAB39LQ9H9S4 337 aa4.38□□□□□ -1.71
RFC4-204ENST00000417876 NEK6Q9HC98 313 aa4.38□□□□□ -1.71
RFC4-204ENST00000417876 TM9SF3Q9HD45 589 aa4.38□□□□□ -1.71
RFC4-204ENST00000417876 ZCCHC3Q9NUD5 404 aaKnown RBP4.38□□□□□ -1.71
RFC4-204ENST00000417876 GPATCH2LQ9NWQ4 482 aa4.38□□□□□ -1.71
RFC4-204ENST00000417876 FBXL12Q9NXK8 326 aa4.38□□□□□ -1.71
RFC4-204ENST00000417876 USE1Q9NZ43 259 aa4.38□□□□□ -1.71
RFC4-204ENST00000417876 IL19Q9UHD0 177 aa4.38□□□□□ -1.71
RFC4-204ENST00000417876 RPH3AQ9Y2J0 694 aaPredicted RBP4.38□□□□□ -1.71
RFC4-204ENST00000417876 MTF2Q9Y483 593 aaPredicted RBP4.38□□□□□ -1.71
RFC4-204ENST00000417876 N6AMT1Q9Y5N5 214 aa4.38□□□□□ -1.71
RFC4-204ENST00000417876 ETV7Q9Y603 341 aa4.38□□□□□ -1.71
RFC4-204ENST00000417876 SSC5DA1L4H1 1573 aa4.38□□□□□ -1.71
RFC4-204ENST00000417876 DOCK5Q9H7D0 1870 aa4.38□□□□□ -1.71
RFC4-204ENST00000417876 C2orf92A0A1B0GVN3 265 aa4.37□□□□□ -1.71
RFC4-204ENST00000417876 ATP6AP2A0A1C7CYW4 349 aa4.37□□□□□ -1.71
RFC4-204ENST00000417876 METTL15A6NJ78 407 aa4.37□□□□□ -1.71
RFC4-204ENST00000417876 SLC9B1P1A6NJY1 282 aa4.37□□□□□ -1.71
RFC4-204ENST00000417876 LMO7DNF2Z398 122 aa4.37□□□□□ -1.71
RFC4-204ENST00000417876 NPIPB9F8W1W9 429 aa4.37□□□□□ -1.71
RFC4-204ENST00000417876 UBDO15205 165 aa4.37□□□□□ -1.71
RFC4-204ENST00000417876 MED7O43513 233 aa4.37□□□□□ -1.71
RFC4-204ENST00000417876 MRPS14O60783 128 aaKnown RBP4.37□□□□□ -1.71
RFC4-204ENST00000417876 SEC22BO75396 215 aa4.37□□□□□ -1.71
RFC4-204ENST00000417876 GMNNO75496 209 aa4.37□□□□□ -1.71
RFC4-204ENST00000417876 CLN5O75503 358 aa4.37□□□□□ -1.71
RFC4-204ENST00000417876 BBOX1O75936 387 aa4.37□□□□□ -1.71
RFC4-204ENST00000417876 SEMA3DO95025 777 aa4.37□□□□□ -1.71
RFC4-204ENST00000417876 SNX4O95219 450 aa4.37□□□□□ -1.71
RFC4-204ENST00000417876 CLDN1O95832 211 aa4.37□□□□□ -1.71
RFC4-204ENST00000417876 PTTG1O95997 202 aa4.37□□□□□ -1.71
RFC4-204ENST00000417876 CHRNA1P02708 482 aa4.37□□□□□ -1.71
RFC4-204ENST00000417876 TRAPPC2P0DI81 140 aa4.37□□□□□ -1.71
RFC4-204ENST00000417876 TRAPPC2BP0DI82 140 aa4.37□□□□□ -1.71
RFC4-204ENST00000417876 PRKAR1AP10644 381 aa4.37□□□□□ -1.71
RFC4-204ENST00000417876 IL10P22301 178 aa4.37□□□□□ -1.71
RFC4-204ENST00000417876 AADACP22760 399 aa4.37□□□□□ -1.71
RFC4-204ENST00000417876 HTR1EP28566 365 aa4.37□□□□□ -1.71
RFC4-204ENST00000417876 CA8P35219 290 aa4.37□□□□□ -1.71
RFC4-204ENST00000417876 ETV6P41212 452 aa4.37□□□□□ -1.71
RFC4-204ENST00000417876 NAMPTP43490 491 aa4.37□□□□□ -1.71
RFC4-204ENST00000417876 KRT6CP48668 564 aa4.37□□□□□ -1.71
RFC4-204ENST00000417876 RPL34P49207 117 aaKnown RBP4.37□□□□□ -1.71
RFC4-204ENST00000417876 TNFSF10P50591 281 aa4.37□□□□□ -1.71
RFC4-204ENST00000417876 NKX2-5P52952 324 aaPredicted RBP4.37□□□□□ -1.71
RFC4-204ENST00000417876 GNG2P59768 71 aa4.37□□□□□ -1.71
RFC4-204ENST00000417876 IL1RL1Q01638 556 aa4.37□□□□□ -1.71
RFC4-204ENST00000417876 CD47Q08722 323 aa4.37□□□□□ -1.71
RFC4-204ENST00000417876 CNTN1Q12860 1018 aa4.37□□□□□ -1.71
RFC4-204ENST00000417876 LCP2Q13094 533 aa4.37□□□□□ -1.71
RFC4-204ENST00000417876 CDK10Q15131 360 aa4.37□□□□□ -1.71
RFC4-204ENST00000417876 SPHARQ15513 63 aa4.37□□□□□ -1.71
RFC4-204ENST00000417876 TAB1Q15750 504 aa4.37□□□□□ -1.71
RFC4-204ENST00000417876 PPP1R3AQ16821 1122 aa4.37□□□□□ -1.71
RFC4-204ENST00000417876 ZNF181Q2M3W8 571 aa4.37□□□□□ -1.71
RFC4-204ENST00000417876 FAM106AQ4KMX7 169 aa4.37□□□□□ -1.71
RFC4-204ENST00000417876 YIF1BQ5BJH7 314 aa4.37□□□□□ -1.71
RFC4-204ENST00000417876 Q5BKY6 102 aa4.37□□□□□ -1.71
RFC4-204ENST00000417876 SPANXN4Q5MJ08 99 aa4.37□□□□□ -1.71
RFC4-204ENST00000417876 SYT6Q5T7P8 510 aaPredicted RBP4.37□□□□□ -1.71
RFC4-204ENST00000417876 ATP1A1-AS1Q5TC04 95 aa4.37□□□□□ -1.71
RFC4-204ENST00000417876 ETFRF1Q6IPR1 90 aa4.37□□□□□ -1.71
RFC4-204ENST00000417876 FAM183BPQ6ZVS7 135 aa4.37□□□□□ -1.71
RFC4-204ENST00000417876 GDPD3Q7L5L3 318 aa4.37□□□□□ -1.71
RFC4-204ENST00000417876 BNIPLQ7Z465 357 aa4.37□□□□□ -1.71
RFC4-204ENST00000417876 SLC38A6Q8IZM9 456 aa4.37□□□□□ -1.71
RFC4-204ENST00000417876 COLGALT1Q8NBJ5 622 aa4.37□□□□□ -1.71
RFC4-204ENST00000417876 SIDT2Q8NBJ9 832 aaKnown RBP4.37□□□□□ -1.71
RFC4-204ENST00000417876 RNF149Q8NC42 400 aa4.37□□□□□ -1.71
RFC4-204ENST00000417876 NDNFQ8TB73 568 aa4.37□□□□□ -1.71
RFC4-204ENST00000417876 UBTD2Q8WUN7 234 aa4.37□□□□□ -1.71
RFC4-204ENST00000417876 KCTD4Q8WVF5 259 aa4.37□□□□□ -1.71
RFC4-204ENST00000417876 CAPSLQ8WWF8 208 aa4.37□□□□□ -1.71
RFC4-204ENST00000417876 CYGBQ8WWM9 190 aa4.37□□□□□ -1.71
RFC4-204ENST00000417876 HTR3CQ8WXA8 447 aa4.37□□□□□ -1.71
RFC4-204ENST00000417876 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.37□□□□□ -1.71
RFC4-204ENST00000417876 ISG20Q96AZ6 181 aaKnown RBP4.37□□□□□ -1.71
RFC4-204ENST00000417876 OMA1Q96E52 524 aa4.37□□□□□ -1.71
RFC4-204ENST00000417876 NRBF2Q96F24 287 aa4.37□□□□□ -1.71
RFC4-204ENST00000417876 AURKBQ96GD4 344 aaPredicted RBP4.37□□□□□ -1.71
RFC4-204ENST00000417876 VPS39Q96JC1 886 aa4.37□□□□□ -1.71
RFC4-204ENST00000417876 LRR1Q96L50 414 aa4.37□□□□□ -1.71
RFC4-204ENST00000417876 LURAP1Q96LR2 239 aa4.37□□□□□ -1.71
RFC4-204ENST00000417876 AGAP4Q96P64 663 aa4.37□□□□□ -1.71
RFC4-204ENST00000417876 CSPG4P5Q96PW8 444 aa4.37□□□□□ -1.71
RFC4-204ENST00000417876 DHRS9Q9BPW9 319 aa4.37□□□□□ -1.71
RFC4-204ENST00000417876 CCM2Q9BSQ5 444 aa4.37□□□□□ -1.71
RFC4-204ENST00000417876 UPF3AQ9H1J1 476 aaKnown RBP4.37□□□□□ -1.71
RFC4-204ENST00000417876 PORCNQ9H237 461 aa4.37□□□□□ -1.71
RFC4-204ENST00000417876 DSN1Q9H410 356 aa4.37□□□□□ -1.71
RFC4-204ENST00000417876 RHOJQ9H4E5 214 aa4.37□□□□□ -1.71
RFC4-204ENST00000417876 DUSP21Q9H596 190 aa4.37□□□□□ -1.71
RFC4-204ENST00000417876 DHX35Q9H5Z1 703 aaKnown RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms