RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 PPA1Q15181 289 aa22.4■■□□□ 1.18
VEGFA-208ENST00000417285 TIMM23BQ5SRD1 257 aa22.4■■□□□ 1.18
VEGFA-208ENST00000417285 C6orf10Q5SRN2 563 aa22.4■■□□□ 1.18
VEGFA-208ENST00000417285 FBXW9Q5XUX1 488 aa22.4■■□□□ 1.18
VEGFA-208ENST00000417285 Q71RC1 249 aaPredicted RBP22.4■■□□□ 1.18
VEGFA-208ENST00000417285 CIARTQ8N365 385 aaPredicted RBP22.4■■□□□ 1.18
VEGFA-208ENST00000417285 OR9I1Q8NGQ6 314 aa22.4■■□□□ 1.18
VEGFA-208ENST00000417285 LILRB1Q8NHL6 650 aaPredicted RBP22.4■■□□□ 1.18
VEGFA-208ENST00000417285 ARL5BQ96KC2 179 aa22.4■■□□□ 1.18
VEGFA-208ENST00000417285 TPT1P8Q9HAU6 139 aa22.4■■□□□ 1.18
VEGFA-208ENST00000417285 THUMPD1Q9NXG2 353 aaKnown RBP22.4■■□□□ 1.18
VEGFA-208ENST00000417285 TMEM181Q9P2C4 612 aa22.4■■□□□ 1.18
VEGFA-208ENST00000417285 NOSIPQ9Y314 301 aaKnown RBP22.4■■□□□ 1.18
VEGFA-208ENST00000417285 CSPG4Q6UVK1 2322 aa22.39■■□□□ 1.17
VEGFA-208ENST00000417285 ZNF716A6NP11 495 aa22.39■■□□□ 1.17
VEGFA-208ENST00000417285 POLR3GO15318 223 aaPredicted RBP22.39■■□□□ 1.17
VEGFA-208ENST00000417285 EIF1BO60739 113 aaKnown RBP22.39■■□□□ 1.17
VEGFA-208ENST00000417285 PGM3O95394 542 aa22.39■■□□□ 1.17
VEGFA-208ENST00000417285 ETFAP13804 333 aa22.39■■□□□ 1.17
VEGFA-208ENST00000417285 SLC1A3P43003 542 aa22.39■■□□□ 1.17
VEGFA-208ENST00000417285 POLR2HP52434 150 aaKnown RBP22.39■■□□□ 1.17
VEGFA-208ENST00000417285 MVDP53602 400 aa22.39■■□□□ 1.17
VEGFA-208ENST00000417285 SLC16A1P53985 500 aa22.39■■□□□ 1.17
VEGFA-208ENST00000417285 ATP5J2P56134 94 aa22.39■■□□□ 1.17
VEGFA-208ENST00000417285 DSTNP60981 165 aa22.39■■□□□ 1.17
VEGFA-208ENST00000417285 MRPL2Q5T653 305 aaKnown RBP22.39■■□□□ 1.17
VEGFA-208ENST00000417285 ZNF440Q8IYI8 595 aa22.39■■□□□ 1.17
VEGFA-208ENST00000417285 VPS33AQ96AX1 596 aa22.39■■□□□ 1.17
VEGFA-208ENST00000417285 APH1AQ96BI3 265 aa22.39■■□□□ 1.17
VEGFA-208ENST00000417285 DDIT4LQ96D03 193 aa22.39■■□□□ 1.17
VEGFA-208ENST00000417285 TRMT61AQ96FX7 289 aaKnown RBP22.39■■□□□ 1.17
VEGFA-208ENST00000417285 TCF7L2Q9NQB0 619 aa22.39■■□□□ 1.17
VEGFA-208ENST00000417285 TMED7-TICAM2A0A0A6YYA0 188 aa22.38■■□□□ 1.17
VEGFA-208ENST00000417285 TMEM247A6NEH6 219 aa22.38■■□□□ 1.17
VEGFA-208ENST00000417285 DPRXA6NFQ7 191 aa22.38■■□□□ 1.17
VEGFA-208ENST00000417285 CFAP73A6NFT4 308 aa22.38■■□□□ 1.17
VEGFA-208ENST00000417285 AP3D1O14617 1153 aa22.38■■□□□ 1.17
VEGFA-208ENST00000417285 ADAM11O75078 769 aa22.38■■□□□ 1.17
VEGFA-208ENST00000417285 COX5AP20674 150 aa22.38■■□□□ 1.17
VEGFA-208ENST00000417285 IGHV1-2P23083 117 aa22.38■■□□□ 1.17
VEGFA-208ENST00000417285 CRISP3P54108 245 aa22.38■■□□□ 1.17
VEGFA-208ENST00000417285 OR2B6P58173 313 aa22.38■■□□□ 1.17
VEGFA-208ENST00000417285 SLC35A1P78382 337 aa22.38■■□□□ 1.17
VEGFA-208ENST00000417285 H3F3AP84243 136 aa22.38■■□□□ 1.17
VEGFA-208ENST00000417285 BSPH1Q075Z2 132 aa22.38■■□□□ 1.17
VEGFA-208ENST00000417285 STK11Q15831 433 aa22.38■■□□□ 1.17
VEGFA-208ENST00000417285 ZNF672Q499Z4 452 aaPredicted RBP22.38■■□□□ 1.17
VEGFA-208ENST00000417285 UBE2J2Q8N2K1 259 aa22.38■■□□□ 1.17
VEGFA-208ENST00000417285 ZNF433Q8N7K0 673 aaPredicted RBP22.38■■□□□ 1.17
VEGFA-208ENST00000417285 SMAP2Q8WU79 429 aaPredicted RBP22.38■■□□□ 1.17
VEGFA-208ENST00000417285 DYDC1Q8WWB3 177 aa22.38■■□□□ 1.17
VEGFA-208ENST00000417285 OR11A1Q9GZK7 315 aa22.38■■□□□ 1.17
VEGFA-208ENST00000417285 PARPBPQ9NWS1 579 aa22.38■■□□□ 1.17
VEGFA-208ENST00000417285 TMED7Q9Y3B3 224 aa22.38■■□□□ 1.17
VEGFA-208ENST00000417285 JMJD1CQ15652 2540 aa22.38■■□□□ 1.17
VEGFA-208ENST00000417285 TRIM64A6NGJ6 449 aa22.37■■□□□ 1.17
VEGFA-208ENST00000417285 TRIM64BA6NI03 449 aa22.37■■□□□ 1.17
VEGFA-208ENST00000417285 OVOL3O00110 214 aa22.37■■□□□ 1.17
VEGFA-208ENST00000417285 SMAD7O15105 426 aaKnown RBP22.37■■□□□ 1.17
VEGFA-208ENST00000417285 MRPL33O75394 65 aaKnown RBP22.37■■□□□ 1.17
VEGFA-208ENST00000417285 BCHEP06276 602 aa22.37■■□□□ 1.17
VEGFA-208ENST00000417285 DANCRP0C864 163 aa22.37■■□□□ 1.17
VEGFA-208ENST00000417285 MRPL19P49406 292 aaKnown RBP22.37■■□□□ 1.17
VEGFA-208ENST00000417285 ETFDHQ16134 617 aa22.37■■□□□ 1.17
VEGFA-208ENST00000417285 ZSWIM7Q19AV6 140 aa22.37■■□□□ 1.17
VEGFA-208ENST00000417285 GTDC1Q4AE62 458 aa22.37■■□□□ 1.17
VEGFA-208ENST00000417285 LIN52Q52LA3 116 aa22.37■■□□□ 1.17
VEGFA-208ENST00000417285 SEZ6L2Q6UXD5 910 aa22.37■■□□□ 1.17
VEGFA-208ENST00000417285 GOLGA6L1Q8N7Z2 621 aa22.37■■□□□ 1.17
VEGFA-208ENST00000417285 NAA11Q9BSU3 229 aaPredicted RBP22.37■■□□□ 1.17
VEGFA-208ENST00000417285 CACYBPQ9HB71 228 aaKnown RBP22.37■■□□□ 1.17
VEGFA-208ENST00000417285 SLCO1B3Q9NPD5 702 aa22.37■■□□□ 1.17
VEGFA-208ENST00000417285 OSGIN1Q9UJX0 560 aa22.37■■□□□ 1.17
VEGFA-208ENST00000417285 HIVEP2P31629 2446 aa22.37■■□□□ 1.17
VEGFA-208ENST00000417285 OR5H1A6NKK0 313 aa22.36■■□□□ 1.17
VEGFA-208ENST00000417285 CCNA2P20248 432 aa22.36■■□□□ 1.17
VEGFA-208ENST00000417285 EDNRAP25101 427 aa22.36■■□□□ 1.17
VEGFA-208ENST00000417285 TACR3P29371 465 aa22.36■■□□□ 1.17
VEGFA-208ENST00000417285 EPS8Q12929 822 aa22.36■■□□□ 1.17
VEGFA-208ENST00000417285 MAPK11Q15759 364 aa22.36■■□□□ 1.17
VEGFA-208ENST00000417285 TTMPQ5BVD1 217 aa22.36■■□□□ 1.17
VEGFA-208ENST00000417285 OR52P1PQ8NH57 321 aa22.36■■□□□ 1.17
VEGFA-208ENST00000417285 SLC38A5Q8WUX1 472 aa22.36■■□□□ 1.17
VEGFA-208ENST00000417285 GTF2H4Q92759 462 aa22.36■■□□□ 1.17
VEGFA-208ENST00000417285 AURKBQ96GD4 344 aaPredicted RBP22.36■■□□□ 1.17
VEGFA-208ENST00000417285 RADILQ96JH8 1075 aa22.36■■□□□ 1.17
VEGFA-208ENST00000417285 RAD21L1Q9H4I0 556 aa22.36■■□□□ 1.17
VEGFA-208ENST00000417285 ASB6Q9NWX5 421 aa22.36■■□□□ 1.17
VEGFA-208ENST00000417285 DSPPQ9NZW4 1301 aa22.35■■□□□ 1.17
VEGFA-208ENST00000417285 TFPTP0C1Z6 253 aa22.35■■□□□ 1.17
VEGFA-208ENST00000417285 OR7E24Q6IFN5 339 aa22.35■■□□□ 1.17
VEGFA-208ENST00000417285 ZC3HAV1Q7Z2W4 902 aaKnown RBP22.35■■□□□ 1.17
VEGFA-208ENST00000417285 CCDC103Q8IW40 242 aa22.35■■□□□ 1.17
VEGFA-208ENST00000417285 GTPBP3Q969Y2 492 aaKnown RBP22.35■■□□□ 1.17
VEGFA-208ENST00000417285 CCDC28BQ9BUN5 200 aa22.35■■□□□ 1.17
VEGFA-208ENST00000417285 TRIM2Q9C040 744 aa22.35■■□□□ 1.17
VEGFA-208ENST00000417285 ADAM19Q9H013 955 aa22.35■■□□□ 1.17
VEGFA-208ENST00000417285 ZNF232Q9UNY5 417 aa22.35■■□□□ 1.17
VEGFA-208ENST00000417285 PCDHB14Q9Y5E9 798 aa22.35■■□□□ 1.17
VEGFA-208ENST00000417285 CADP27708 2225 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms