RNA–Protein interactions for RNA: ENST00000416438.6

LINC00475-202, long intergenic non-protein coding RNA 475, humanhuman

TSL 2 BASIC

Gene LINC00475, Length 2,506 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00475-202ENST00000416438 RDH16O75452 317 aa13.54□□□□□ -0.24
LINC00475-202ENST00000416438 CDC123O75794 336 aaPredicted RBP13.54□□□□□ -0.24
LINC00475-202ENST00000416438 SERPINI2O75830 405 aa13.54□□□□□ -0.24
LINC00475-202ENST00000416438 HOXB2P14652 356 aa13.54□□□□□ -0.24
LINC00475-202ENST00000416438 CD53P19397 219 aa13.54□□□□□ -0.24
LINC00475-202ENST00000416438 ZNF10P21506 573 aaPredicted RBP13.54□□□□□ -0.24
LINC00475-202ENST00000416438 SLC6A6P31641 620 aa13.54□□□□□ -0.24
LINC00475-202ENST00000416438 PBX2P40425 430 aa13.54□□□□□ -0.24
LINC00475-202ENST00000416438 RPS11P62280 158 aaKnown RBP eCLIP13.54□□□□□ -0.24
LINC00475-202ENST00000416438 TRAM1Q15629 374 aa13.54□□□□□ -0.24
LINC00475-202ENST00000416438 ZNF542PQ5EBM4 170 aa13.54□□□□□ -0.24
LINC00475-202ENST00000416438 MS4A15Q8N5U1 240 aa13.54□□□□□ -0.24
LINC00475-202ENST00000416438 DERL3Q96Q80 235 aa13.54□□□□□ -0.24
LINC00475-202ENST00000416438 DNAJB12Q9NXW2 375 aaKnown RBP13.54□□□□□ -0.24
LINC00475-202ENST00000416438 NKIRAS2Q9NYR9 191 aa13.54□□□□□ -0.24
LINC00475-202ENST00000416438 COPS3Q9UNS2 423 aa13.54□□□□□ -0.24
LINC00475-202ENST00000416438 DTX4Q9Y2E6 619 aa13.54□□□□□ -0.24
LINC00475-202ENST00000416438 A0A087WV48 116 aa13.54□□□□□ -0.24
LINC00475-202ENST00000416438 C4orf47A7E2U8 309 aa13.54□□□□□ -0.24
LINC00475-202ENST00000416438 PRKNO60260 465 aaPredicted RBP13.54□□□□□ -0.24
LINC00475-202ENST00000416438 WNT1P04628 370 aa13.54□□□□□ -0.24
LINC00475-202ENST00000416438 STOMP27105 288 aa13.54□□□□□ -0.24
LINC00475-202ENST00000416438 GRPRP30550 384 aa13.54□□□□□ -0.24
LINC00475-202ENST00000416438 P2RX3P56373 397 aa13.54□□□□□ -0.24
LINC00475-202ENST00000416438 CDK5R1Q15078 307 aa13.54□□□□□ -0.24
LINC00475-202ENST00000416438 OR6C4Q8NGE1 309 aa13.54□□□□□ -0.24
LINC00475-202ENST00000416438 OR51Q1Q8NH59 317 aa13.54□□□□□ -0.24
LINC00475-202ENST00000416438 SNX33Q8WV41 574 aa13.54□□□□□ -0.24
LINC00475-202ENST00000416438 C17orf50Q8WW18 174 aa13.54□□□□□ -0.24
LINC00475-202ENST00000416438 CTHRC1Q96CG8 243 aa13.54□□□□□ -0.24
LINC00475-202ENST00000416438 NMNAT3Q96T66 252 aa13.54□□□□□ -0.24
LINC00475-202ENST00000416438 GPR174Q9BXC1 333 aa13.54□□□□□ -0.24
LINC00475-202ENST00000416438 OR51J1Q9H342 316 aa13.54□□□□□ -0.24
LINC00475-202ENST00000416438 HAO2Q9NYQ3 351 aa13.54□□□□□ -0.24
LINC00475-202ENST00000416438 YBX2Q9Y2T7 364 aaKnown RBP13.54□□□□□ -0.24
LINC00475-202ENST00000416438 NPFFR2Q9Y5X5 522 aa13.54□□□□□ -0.24
LINC00475-202ENST00000416438 TRBV2A0A0J9YWF9 115 aa13.53□□□□□ -0.24
LINC00475-202ENST00000416438 C7orf66A4D0T2 115 aa13.53□□□□□ -0.24
LINC00475-202ENST00000416438 MEN1O00255 615 aa13.53□□□□□ -0.24
LINC00475-202ENST00000416438 FLRT2O43155 660 aa13.53□□□□□ -0.24
LINC00475-202ENST00000416438 OR10H2O60403 315 aa13.53□□□□□ -0.24
LINC00475-202ENST00000416438 SELENOFO60613 162 aa13.53□□□□□ -0.24
LINC00475-202ENST00000416438 GALR3O60755 368 aaPredicted RBP13.53□□□□□ -0.24
LINC00475-202ENST00000416438 KLF8O95600 359 aaPredicted RBP13.53□□□□□ -0.24
LINC00475-202ENST00000416438 UQCRC1P31930 480 aa13.53□□□□□ -0.24
LINC00475-202ENST00000416438 OR3A3P47888 321 aa13.53□□□□□ -0.24
LINC00475-202ENST00000416438 SIRPAP78324 504 aa13.53□□□□□ -0.24
LINC00475-202ENST00000416438 KIRREL2Q6UWL6 708 aa13.53□□□□□ -0.24
LINC00475-202ENST00000416438 OR9A4Q8NGU2 314 aa13.53□□□□□ -0.24
LINC00475-202ENST00000416438 SIPA1Q96FS4 1042 aa13.53□□□□□ -0.24
LINC00475-202ENST00000416438 TCEAL2Q9H3H9 227 aaPredicted RBP13.53□□□□□ -0.24
LINC00475-202ENST00000416438 HRASLS2Q9NWW9 162 aa13.53□□□□□ -0.24
LINC00475-202ENST00000416438 CHRNA9Q9UGM1 479 aa13.53□□□□□ -0.24
LINC00475-202ENST00000416438 PCOLCE2Q9UKZ9 415 aa13.53□□□□□ -0.24
LINC00475-202ENST00000416438 ZNF346Q9UL40 294 aaKnown RBP13.53□□□□□ -0.24
LINC00475-202ENST00000416438 ING4Q9UNL4 249 aa13.53□□□□□ -0.24
LINC00475-202ENST00000416438 SPACA6W5XKT8 324 aa13.53□□□□□ -0.24
LINC00475-202ENST00000416438 NKX2-2O95096 273 aa13.53□□□□□ -0.24
LINC00475-202ENST00000416438 UBL3O95164 117 aa13.53□□□□□ -0.24
LINC00475-202ENST00000416438 IFNGP01579 166 aa13.53□□□□□ -0.24
LINC00475-202ENST00000416438 EDNRAP25101 427 aa13.53□□□□□ -0.24
LINC00475-202ENST00000416438 KIAA1024LP59773 190 aa13.53□□□□□ -0.24
LINC00475-202ENST00000416438 ACTC1P68032 377 aa13.53□□□□□ -0.24
LINC00475-202ENST00000416438 ACTA1P68133 377 aa13.53□□□□□ -0.24
LINC00475-202ENST00000416438 ERV3-1Q14264 604 aa13.53□□□□□ -0.24
LINC00475-202ENST00000416438 ST3GAL2Q16842 350 aa13.53□□□□□ -0.24
LINC00475-202ENST00000416438 ALG11Q2TAA5 492 aa13.53□□□□□ -0.24
LINC00475-202ENST00000416438 ARHGAP11AQ6P4F7 1023 aa13.53□□□□□ -0.24
LINC00475-202ENST00000416438 SERPINA12Q8IW75 414 aa13.53□□□□□ -0.24
LINC00475-202ENST00000416438 CSNK1A1LQ8N752 337 aa13.53□□□□□ -0.24
LINC00475-202ENST00000416438 ZNF671Q8TAW3 534 aa13.53□□□□□ -0.24
LINC00475-202ENST00000416438 LGALS14Q8TCE9 139 aa13.53□□□□□ -0.24
LINC00475-202ENST00000416438 FAM131CQ96AQ9 280 aa13.53□□□□□ -0.24
LINC00475-202ENST00000416438 SMIM19Q96E16 107 aa13.53□□□□□ -0.24
LINC00475-202ENST00000416438 SLC25A18Q9H1K4 315 aa13.53□□□□□ -0.24
LINC00475-202ENST00000416438 MTIF3Q9H2K0 278 aaKnown RBP13.53□□□□□ -0.24
LINC00475-202ENST00000416438 NUBP2Q9Y5Y2 271 aa13.53□□□□□ -0.24
LINC00475-202ENST00000416438 OGG1O15527 345 aa13.52□□□□□ -0.24
LINC00475-202ENST00000416438 RPL4P36578 427 aaKnown RBP13.52□□□□□ -0.24
LINC00475-202ENST00000416438 MMP15P51511 669 aa13.52□□□□□ -0.24
LINC00475-202ENST00000416438 GBX2P52951 348 aaPredicted RBP13.52□□□□□ -0.24
LINC00475-202ENST00000416438 HES5Q5TA89 166 aa13.52□□□□□ -0.24
LINC00475-202ENST00000416438 SFRP4Q6FHJ7 346 aaPredicted RBP13.52□□□□□ -0.24
LINC00475-202ENST00000416438 ZCCHC12Q6PEW1 402 aa13.52□□□□□ -0.24
LINC00475-202ENST00000416438 ZNF767PQ75MW2 155 aa13.52□□□□□ -0.24
LINC00475-202ENST00000416438 UBE2Q1Q7Z7E8 422 aa13.52□□□□□ -0.24
LINC00475-202ENST00000416438 SLC35F2Q8IXU6 374 aa13.52□□□□□ -0.24
LINC00475-202ENST00000416438 OR6K6Q8NGW6 343 aa13.52□□□□□ -0.24
LINC00475-202ENST00000416438 BAHD1Q8TBE0 780 aaPredicted RBP13.52□□□□□ -0.24
LINC00475-202ENST00000416438 HAVCR2Q8TDQ0 301 aa13.52□□□□□ -0.24
LINC00475-202ENST00000416438 PCNPQ8WW12 178 aaKnown RBP13.52□□□□□ -0.24
LINC00475-202ENST00000416438 ZNF426Q9BUY5 554 aa13.52□□□□□ -0.24
LINC00475-202ENST00000416438 FAM60AQ9NP50 221 aa13.52□□□□□ -0.24
LINC00475-202ENST00000416438 C14orf105Q9NVL8 296 aa13.52□□□□□ -0.24
LINC00475-202ENST00000416438 STMN3Q9NZ72 180 aa13.52□□□□□ -0.24
LINC00475-202ENST00000416438 FLVCR2Q9UPI3 526 aa13.52□□□□□ -0.24
LINC00475-202ENST00000416438 TRABD2BA6NFA1 517 aa13.52□□□□□ -0.25
LINC00475-202ENST00000416438 ACOD1A6NK06 481 aa13.52□□□□□ -0.25
LINC00475-202ENST00000416438 EGFP01133 1207 aa13.52□□□□□ -0.25
LINC00475-202ENST00000416438 CELA2BP08218 269 aaPredicted RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms