RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 A0A1W2PR80 420 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 VSTM2BA6NLU5 285 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 DBX1A6NMT0 343 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 ZNF879B4DU55 563 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 ZNF587BE7ETH6 402 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 SPECC1L-ADORA2AF8WAN1 911 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 CTSVO60911 334 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 IFNA2P01563 188 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 MBP02144 154 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 P04436 131 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 ACADSP16219 412 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 CCNE1P24864 410 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 PSMB5P28074 263 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 P2RY2P41231 377 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 AMTP48728 403 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 RAB7AP51149 207 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 RPS14P62263 151 aaKnown RBP2.22□□□□□ -2.05
MCF2-204ENST00000414978 ELAVL2Q12926 359 aaKnown RBP2.22□□□□□ -2.05
MCF2-204ENST00000414978 BNIP1Q12981 228 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 RBBP5Q15291 538 aaKnown RBP2.22□□□□□ -2.05
MCF2-204ENST00000414978 UBE2V2Q15819 145 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 ZNF74Q16587 644 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 ZNF699Q32M78 642 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 ZNF260Q3ZCT1 412 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 TP53I3Q53FA7 332 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 ATP1A1-AS1Q5TC04 95 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 SPECC1LQ69YQ0 1117 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 LANCL3Q6ZV70 420 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 KATNAL2Q8IYT4 538 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 FAM9CQ8IZT9 166 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 RFLNBQ8N5W9 214 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 TEX26Q8N6G2 289 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 OR5L2Q8NGL0 311 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 SMARCD2Q92925 531 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 VSTM2LQ96N03 204 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 FICDQ9BVA6 458 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 SLC29A3Q9BZD2 475 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 RACGAP1Q9H0H5 632 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 NRN1Q9NPD7 142 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 ESM1Q9NQ30 184 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 ELOVL5Q9NYP7 299 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 SIGLEC8Q9NYZ4 499 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 FLRT3Q9NZU0 649 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 GNG12Q9UBI6 72 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 PYCARDQ9ULZ3 195 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 PRPF19Q9UMS4 504 aaKnown RBP2.22□□□□□ -2.05
MCF2-204ENST00000414978 CSDC2Q9Y534 153 aaKnown RBP2.22□□□□□ -2.05
MCF2-204ENST00000414978 TENM4Q6N022 2769 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 RIF1Q5UIP0 2472 aaKnown RBP2.22□□□□□ -2.05
MCF2-204ENST00000414978 IGLV5-45A0A087WSX0 123 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 IGLV9-49A0A0B4J1Y8 123 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 LRP5LA4QPB2 252 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 C10orf142B7Z368 130 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 WNT9BO14905 357 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 SRPX2O60687 465 aaPredicted RBP2.22□□□□□ -2.05
MCF2-204ENST00000414978 CDH16O75309 829 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 WBP4O75554 376 aaKnown RBP2.22□□□□□ -2.05
MCF2-204ENST00000414978 TXNDC12O95881 172 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 FSHBP01225 129 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 GSTA1P08263 222 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 ALPIP09923 528 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 TNFRSF1BP20333 461 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 IDSP22304 550 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 LAP3P28838 519 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 AXLP30530 894 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 SOX3P41225 446 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 MAGEA1P43355 309 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 GNPDA1P46926 289 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 RAB9AP51151 201 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 CCR4P51679 360 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 ABCE1P61221 599 aaKnown RBP2.22□□□□□ -2.05
MCF2-204ENST00000414978 HERVK_113P63132 956 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 LTBQ06643 244 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 GAGE2BQ13066 116 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 KYAT1Q16773 422 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 GAGE2EQ4V326 116 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 SOHLH1Q5JUK2 328 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 SEL1L2Q5TEA6 688 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 SEL1L3Q68CR1 1132 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 PDPK2PQ6A1A2 396 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 HIST2H2AA3Q6FI13 130 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 GAGE2AQ6NT46 116 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 REG3GQ6UW15 175 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 CATSPERDQ86XM0 798 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 RNF130Q86XS8 419 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 PLD3Q8IV08 490 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 RAB42Q8N4Z0 105 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 ARFGAP2Q8N6H7 521 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 CCDC112Q8NEF3 446 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 RAB1CQ92928 201 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 EFHD2Q96C19 240 aaPredicted RBP2.22□□□□□ -2.05
MCF2-204ENST00000414978 SDSLQ96GA7 329 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 LMLNQ96KR4 655 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 NEURL2Q9BR09 285 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 RBM24Q9BX46 236 aaKnown RBP2.22□□□□□ -2.05
MCF2-204ENST00000414978 ERVK-6Q9BXR3 956 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 GANQ9H2C0 597 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 OR52A5Q9H2C5 316 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 COG4Q9H9E3 785 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 LYRM4Q9HD34 91 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms