RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 TMEM212A6NML5 194 aa11.09□□□□□ -0.63
PTPRF-205ENST00000414879 PNLIPRP2P54317 469 aa11.09□□□□□ -0.63
PTPRF-205ENST00000414879 POU3F1Q03052 451 aaPredicted RBP11.09□□□□□ -0.63
PTPRF-205ENST00000414879 LSAMPQ13449 338 aa11.09□□□□□ -0.63
PTPRF-205ENST00000414879 DNAJC22Q8N4W6 341 aa11.09□□□□□ -0.63
PTPRF-205ENST00000414879 OR8H1Q8NGG4 311 aa11.09□□□□□ -0.63
PTPRF-205ENST00000414879 OR8K3Q8NH51 312 aa11.09□□□□□ -0.63
PTPRF-205ENST00000414879 TTC9Q92623 222 aa11.09□□□□□ -0.63
PTPRF-205ENST00000414879 FOXQ1Q9C009 403 aa11.09□□□□□ -0.63
PTPRF-205ENST00000414879 C1orf198Q9H425 327 aa11.09□□□□□ -0.63
PTPRF-205ENST00000414879 A6NLC8 198 aa11.09□□□□□ -0.63
PTPRF-205ENST00000414879 OR2AT4A6NND4 320 aa11.09□□□□□ -0.63
PTPRF-205ENST00000414879 ZNF195O14628 629 aa11.09□□□□□ -0.63
PTPRF-205ENST00000414879 OR7A10O76100 309 aa11.09□□□□□ -0.63
PTPRF-205ENST00000414879 APOL3O95236 402 aa11.09□□□□□ -0.63
PTPRF-205ENST00000414879 SRYQ05066 204 aa11.09□□□□□ -0.63
PTPRF-205ENST00000414879 SPRED3Q2MJR0 410 aa11.09□□□□□ -0.63
PTPRF-205ENST00000414879 GPBAR1Q8TDU6 330 aa11.09□□□□□ -0.63
PTPRF-205ENST00000414879 TWSG1Q9GZX9 223 aa11.09□□□□□ -0.63
PTPRF-205ENST00000414879 DIMT1Q9UNQ2 313 aaKnown RBP11.09□□□□□ -0.63
PTPRF-205ENST00000414879 RPH3AQ9Y2J0 694 aaPredicted RBP11.09□□□□□ -0.63
PTPRF-205ENST00000414879 NPFFR2Q9Y5X5 522 aa11.09□□□□□ -0.63
PTPRF-205ENST00000414879 SMCHD1A6NHR9 2005 aa11.08□□□□□ -0.64
PTPRF-205ENST00000414879 H0Y8X5 98 aa11.08□□□□□ -0.64
PTPRF-205ENST00000414879 HTR1FP30939 366 aa11.08□□□□□ -0.64
PTPRF-205ENST00000414879 PRSS3P35030 304 aa11.08□□□□□ -0.64
PTPRF-205ENST00000414879 RGS6P49758 472 aa11.08□□□□□ -0.64
PTPRF-205ENST00000414879 B4GALNT1Q00973 533 aa11.08□□□□□ -0.64
PTPRF-205ENST00000414879 RELAQ04206 551 aa11.08□□□□□ -0.64
PTPRF-205ENST00000414879 MAP4K2Q12851 820 aa11.08□□□□□ -0.64
PTPRF-205ENST00000414879 C3orf33Q6P1S2 294 aa11.08□□□□□ -0.64
PTPRF-205ENST00000414879 LINC00299Q6ZSB3 139 aa11.08□□□□□ -0.64
PTPRF-205ENST00000414879 GDF7Q7Z4P5 450 aa11.08□□□□□ -0.64
PTPRF-205ENST00000414879 ZADH2Q8N4Q0 377 aa11.08□□□□□ -0.64
PTPRF-205ENST00000414879 CYB561A3Q8NBI2 242 aa11.08□□□□□ -0.64
PTPRF-205ENST00000414879 STEAP2Q8NFT2 490 aa11.08□□□□□ -0.64
PTPRF-205ENST00000414879 SDF2Q99470 211 aa11.08□□□□□ -0.64
PTPRF-205ENST00000414879 CPNE5Q9HCH3 593 aa11.08□□□□□ -0.64
PTPRF-205ENST00000414879 SLC23A2Q9UGH3 650 aa11.08□□□□□ -0.64
PTPRF-205ENST00000414879 HIF3AQ9Y2N7 669 aa11.08□□□□□ -0.64
PTPRF-205ENST00000414879 NUMA1Q14980 2115 aa11.08□□□□□ -0.64
PTPRF-205ENST00000414879 HSPB2A8KAH6 182 aa11.08□□□□□ -0.64
PTPRF-205ENST00000414879 PRAF2O60831 178 aa11.08□□□□□ -0.64
PTPRF-205ENST00000414879 PIAS2O75928 621 aa11.08□□□□□ -0.64
PTPRF-205ENST00000414879 CSF1P09603 554 aa11.08□□□□□ -0.64
PTPRF-205ENST00000414879 ST6GAL1P15907 406 aa11.08□□□□□ -0.64
PTPRF-205ENST00000414879 AGTR1P30556 359 aa11.08□□□□□ -0.64
PTPRF-205ENST00000414879 HSPB2Q16082 182 aa11.08□□□□□ -0.64
PTPRF-205ENST00000414879 COX14Q96I36 57 aa11.08□□□□□ -0.64
PTPRF-205ENST00000414879 PHOX2BQ99453 314 aa11.08□□□□□ -0.64
PTPRF-205ENST00000414879 RANBP3Q9H6Z4 567 aaPredicted RBP11.08□□□□□ -0.64
PTPRF-205ENST00000414879 NDUFAF4Q9P032 175 aa11.08□□□□□ -0.64
PTPRF-205ENST00000414879 YARS2Q9Y2Z4 477 aaKnown RBP11.08□□□□□ -0.64
PTPRF-205ENST00000414879 KCNE1BA0A087WTH5 132 aa11.08□□□□□ -0.64
PTPRF-205ENST00000414879 TRBV4-1A0A0J9YWV2 114 aa11.08□□□□□ -0.64
PTPRF-205ENST00000414879 OR6C70A6NIJ9 312 aa11.08□□□□□ -0.64
PTPRF-205ENST00000414879 LINC01387J3KSC0 135 aa11.08□□□□□ -0.64
PTPRF-205ENST00000414879 SCGB2A1O75556 95 aa11.08□□□□□ -0.64
PTPRF-205ENST00000414879 ENPP1P22413 925 aa11.08□□□□□ -0.64
PTPRF-205ENST00000414879 PRKACBP22694 351 aa11.08□□□□□ -0.64
PTPRF-205ENST00000414879 TAS2R31P59538 309 aa11.08□□□□□ -0.64
PTPRF-205ENST00000414879 PSMA6P60900 246 aaKnown RBP11.08□□□□□ -0.64
PTPRF-205ENST00000414879 PIGFQ07326 219 aa11.08□□□□□ -0.64
PTPRF-205ENST00000414879 NKAIN2Q5VXU1 208 aa11.08□□□□□ -0.64
PTPRF-205ENST00000414879 RAB11FIP2Q7L804 512 aa11.08□□□□□ -0.64
PTPRF-205ENST00000414879 CCDC71LQ8N9Z2 235 aa11.08□□□□□ -0.64
PTPRF-205ENST00000414879 SLC16A11Q8NCK7 471 aa11.08□□□□□ -0.64
PTPRF-205ENST00000414879 GOT1L1Q8NHS2 421 aaPredicted RBP11.08□□□□□ -0.64
PTPRF-205ENST00000414879 NRG4Q8WWG1 115 aa11.08□□□□□ -0.64
PTPRF-205ENST00000414879 SLC5A7Q9GZV3 580 aa11.08□□□□□ -0.64
PTPRF-205ENST00000414879 OR10A4Q9H209 315 aa11.08□□□□□ -0.64
PTPRF-205ENST00000414879 ZNF281Q9Y2X9 895 aa11.08□□□□□ -0.64
PTPRF-205ENST00000414879 KLF13Q9Y2Y9 288 aaPredicted RBP11.08□□□□□ -0.64
PTPRF-205ENST00000414879 GASTP01350 101 aa11.07□□□□□ -0.64
PTPRF-205ENST00000414879 TMEM225BP0DP42 221 aa11.07□□□□□ -0.64
PTPRF-205ENST00000414879 BMP4P12644 408 aa11.07□□□□□ -0.64
PTPRF-205ENST00000414879 RPS5P46782 204 aaKnown RBP11.07□□□□□ -0.64
PTPRF-205ENST00000414879 IL11RAQ14626 422 aa11.07□□□□□ -0.64
PTPRF-205ENST00000414879 TMEM176BQ3YBM2 270 aaPredicted RBP11.07□□□□□ -0.64
PTPRF-205ENST00000414879 ACSM3Q53FZ2 586 aa11.07□□□□□ -0.64
PTPRF-205ENST00000414879 AWAT2Q6E213 333 aa11.07□□□□□ -0.64
PTPRF-205ENST00000414879 AAED1Q7RTV5 226 aa11.07□□□□□ -0.64
PTPRF-205ENST00000414879 B3GNT8Q7Z7M8 397 aa11.07□□□□□ -0.64
PTPRF-205ENST00000414879 OR52N1Q8NH53 320 aa11.07□□□□□ -0.64
PTPRF-205ENST00000414879 COQ8AQ8NI60 647 aa11.07□□□□□ -0.64
PTPRF-205ENST00000414879 GGHQ92820 318 aa11.07□□□□□ -0.64
PTPRF-205ENST00000414879 RAB39BQ96DA2 213 aa11.07□□□□□ -0.64
PTPRF-205ENST00000414879 ABCG5Q9H222 651 aa11.07□□□□□ -0.64
PTPRF-205ENST00000414879 ZNF442Q9H7R0 627 aa11.07□□□□□ -0.64
PTPRF-205ENST00000414879 VNN3Q9NY84 501 aa11.07□□□□□ -0.64
PTPRF-205ENST00000414879 A0A0G2JMZ2 1700 aa11.07□□□□□ -0.64
PTPRF-205ENST00000414879 OR2A25A4D2G3 310 aa11.07□□□□□ -0.64
PTPRF-205ENST00000414879 IDSB3KWA1 339 aa11.07□□□□□ -0.64
PTPRF-205ENST00000414879 PIPP12273 146 aaPredicted RBP11.07□□□□□ -0.64
PTPRF-205ENST00000414879 GABRA5P31644 462 aa11.07□□□□□ -0.64
PTPRF-205ENST00000414879 SLC1A3P43003 542 aa11.07□□□□□ -0.64
PTPRF-205ENST00000414879 ATP1B3P54709 279 aa11.07□□□□□ -0.64
PTPRF-205ENST00000414879 IL10RAQ13651 578 aa11.07□□□□□ -0.64
PTPRF-205ENST00000414879 SLC36A2Q495M3 483 aa11.07□□□□□ -0.64
PTPRF-205ENST00000414879 NKAPLQ5M9Q1 402 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms