RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 ZNF814B7Z6K7 855 aa13.16□□□□□ -0.3
LIMS4-201ENST00000413601 FBP2O00757 339 aa13.16□□□□□ -0.3
LIMS4-201ENST00000413601 HRGP04196 525 aa13.16□□□□□ -0.3
LIMS4-201ENST00000413601 IMPDH2P12268 514 aa13.16□□□□□ -0.3
LIMS4-201ENST00000413601 SLC6A2P23975 617 aa13.16□□□□□ -0.3
LIMS4-201ENST00000413601 CXCR1P25024 350 aa13.16□□□□□ -0.3
LIMS4-201ENST00000413601 MDH1P40925 334 aaKnown RBP13.16□□□□□ -0.3
LIMS4-201ENST00000413601 MTPNP58546 118 aa13.16□□□□□ -0.3
LIMS4-201ENST00000413601 BNIP2Q12982 314 aa13.16□□□□□ -0.3
LIMS4-201ENST00000413601 CAPRIN1Q14444 709 aaKnown RBP13.16□□□□□ -0.3
LIMS4-201ENST00000413601 CXorf67Q86X51 503 aaPredicted RBP13.16□□□□□ -0.3
LIMS4-201ENST00000413601 KRT73Q86Y46 540 aa13.16□□□□□ -0.3
LIMS4-201ENST00000413601 CCDC103Q8IW40 242 aa13.16□□□□□ -0.3
LIMS4-201ENST00000413601 FANCFQ9NPI8 374 aa13.16□□□□□ -0.3
LIMS4-201ENST00000413601 ZNF226Q9NYT6 803 aa13.16□□□□□ -0.3
LIMS4-201ENST00000413601 ABCA4P78363 2273 aa13.16□□□□□ -0.3
LIMS4-201ENST00000413601 MYO9AB2RTY4 2548 aa13.16□□□□□ -0.3
LIMS4-201ENST00000413601 AKAP6Q13023 2319 aa13.16□□□□□ -0.3
LIMS4-201ENST00000413601 PRR14LQ5THK1 2151 aa13.15□□□□□ -0.3
LIMS4-201ENST00000413601 A0A1W2PPR1 153 aa13.15□□□□□ -0.3
LIMS4-201ENST00000413601 ZNF724A8MTY0 619 aa13.15□□□□□ -0.3
LIMS4-201ENST00000413601 SIAH2O43255 324 aa13.15□□□□□ -0.3
LIMS4-201ENST00000413601 TPST1O60507 370 aa13.15□□□□□ -0.3
LIMS4-201ENST00000413601 RAMP1O60894 148 aa13.15□□□□□ -0.3
LIMS4-201ENST00000413601 GCM2O75603 506 aaPredicted RBP13.15□□□□□ -0.3
LIMS4-201ENST00000413601 GOSR1O95249 250 aa13.15□□□□□ -0.3
LIMS4-201ENST00000413601 FPR1P21462 350 aa13.15□□□□□ -0.3
LIMS4-201ENST00000413601 CRYGSP22914 178 aa13.15□□□□□ -0.3
LIMS4-201ENST00000413601 EDNRAP25101 427 aa13.15□□□□□ -0.3
LIMS4-201ENST00000413601 AQP1P29972 269 aa13.15□□□□□ -0.3
LIMS4-201ENST00000413601 PRKAR1BP31321 381 aa13.15□□□□□ -0.3
LIMS4-201ENST00000413601 MAP2K6P52564 334 aa13.15□□□□□ -0.3
LIMS4-201ENST00000413601 SLC35A1P78382 337 aa13.15□□□□□ -0.3
LIMS4-201ENST00000413601 KLF10Q13118 480 aa13.15□□□□□ -0.3
LIMS4-201ENST00000413601 CYP51A1Q16850 503 aa13.15□□□□□ -0.3
LIMS4-201ENST00000413601 ABLIM2Q6H8Q1 611 aa13.15□□□□□ -0.3
LIMS4-201ENST00000413601 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.15□□□□□ -0.3
LIMS4-201ENST00000413601 COMTD1Q86VU5 262 aa13.15□□□□□ -0.3
LIMS4-201ENST00000413601 PTOV1Q86YD1 416 aa13.15□□□□□ -0.3
LIMS4-201ENST00000413601 GABRG1Q8N1C3 465 aa13.15□□□□□ -0.3
LIMS4-201ENST00000413601 SPATA5L1Q9BVQ7 753 aa13.15□□□□□ -0.3
LIMS4-201ENST00000413601 SAR1AQ9NR31 198 aa13.15□□□□□ -0.3
LIMS4-201ENST00000413601 PRSS50Q9UI38 385 aa13.15□□□□□ -0.3
LIMS4-201ENST00000413601 ST6GALNAC2Q9UJ37 374 aa13.15□□□□□ -0.3
LIMS4-201ENST00000413601 PRDM4Q9UKN5 801 aa13.15□□□□□ -0.3
LIMS4-201ENST00000413601 SPG11Q96JI7 2443 aa13.14□□□□□ -0.31
LIMS4-201ENST00000413601 IGKV3D-15A0A087WSY6 115 aa13.14□□□□□ -0.31
LIMS4-201ENST00000413601 ZNF716A6NP11 495 aa13.14□□□□□ -0.31
LIMS4-201ENST00000413601 DEFB108AA8MXU0 73 aa13.14□□□□□ -0.31
LIMS4-201ENST00000413601 ATP8B1O43520 1251 aa13.14□□□□□ -0.31
LIMS4-201ENST00000413601 DNPH1O43598 174 aa13.14□□□□□ -0.31
LIMS4-201ENST00000413601 ADAP00813 363 aa13.14□□□□□ -0.31
LIMS4-201ENST00000413601 THBDP07204 575 aa13.14□□□□□ -0.31
LIMS4-201ENST00000413601 OR3A2P47893 321 aa13.14□□□□□ -0.31
LIMS4-201ENST00000413601 IST1P53990 364 aa13.14□□□□□ -0.31
LIMS4-201ENST00000413601 H3F3AP84243 136 aa13.14□□□□□ -0.31
LIMS4-201ENST00000413601 PDK3Q15120 406 aa13.14□□□□□ -0.31
LIMS4-201ENST00000413601 TSC22D1Q15714 1073 aa13.14□□□□□ -0.31
LIMS4-201ENST00000413601 GLIPR1L2Q4G1C9 344 aa13.14□□□□□ -0.31
LIMS4-201ENST00000413601 DHRS4L2Q6PKH6 230 aa13.14□□□□□ -0.31
LIMS4-201ENST00000413601 GALNT5Q7Z7M9 940 aa13.14□□□□□ -0.31
LIMS4-201ENST00000413601 C11orf65Q8NCR3 313 aa13.14□□□□□ -0.31
LIMS4-201ENST00000413601 HIPK4Q8NE63 616 aa13.14□□□□□ -0.31
LIMS4-201ENST00000413601 PIGXQ8TBF5 258 aa13.14□□□□□ -0.31
LIMS4-201ENST00000413601 SLC35B4Q969S0 331 aa13.14□□□□□ -0.31
LIMS4-201ENST00000413601 C3orf49Q96BT1 292 aa13.14□□□□□ -0.31
LIMS4-201ENST00000413601 PIK3IP1Q96FE7 263 aa13.14□□□□□ -0.31
LIMS4-201ENST00000413601 ZNF317Q96PQ6 595 aaPredicted RBP13.14□□□□□ -0.31
LIMS4-201ENST00000413601 ZNF607Q96SK3 696 aa13.14□□□□□ -0.31
LIMS4-201ENST00000413601 POTEKPQ9BYX7 375 aa13.14□□□□□ -0.31
LIMS4-201ENST00000413601 ACTR6Q9GZN1 396 aa13.14□□□□□ -0.31
LIMS4-201ENST00000413601 KAT8Q9H7Z6 458 aaKnown RBP13.14□□□□□ -0.31
LIMS4-201ENST00000413601 PLEKHF2Q9H8W4 249 aa13.14□□□□□ -0.31
LIMS4-201ENST00000413601 KLHL14Q9P2G3 628 aa13.14□□□□□ -0.31
LIMS4-201ENST00000413601 ANGPT4Q9Y264 503 aa13.14□□□□□ -0.31
LIMS4-201ENST00000413601 PLEKHA6Q9Y2H5 1048 aa13.14□□□□□ -0.31
LIMS4-201ENST00000413601 GPR52Q9Y2T5 361 aa13.14□□□□□ -0.31
LIMS4-201ENST00000413601 A8MVM7 634 aa13.13□□□□□ -0.31
LIMS4-201ENST00000413601 PPP3CBP16298 524 aa13.13□□□□□ -0.31
LIMS4-201ENST00000413601 PSMB1P20618 241 aaKnown RBP13.13□□□□□ -0.31
LIMS4-201ENST00000413601 NTF4P34130 210 aa13.13□□□□□ -0.31
LIMS4-201ENST00000413601 IDUAP35475 653 aa13.13□□□□□ -0.31
LIMS4-201ENST00000413601 DMTNQ08495 405 aa13.13□□□□□ -0.31
LIMS4-201ENST00000413601 CEACAM7Q14002 265 aa13.13□□□□□ -0.31
LIMS4-201ENST00000413601 OR7A5Q15622 319 aa13.13□□□□□ -0.31
LIMS4-201ENST00000413601 TRMT5Q32P41 509 aaKnown RBP13.13□□□□□ -0.31
LIMS4-201ENST00000413601 MMEL1Q495T6 779 aa13.13□□□□□ -0.31
LIMS4-201ENST00000413601 SFRP5Q5T4F7 317 aa13.13□□□□□ -0.31
LIMS4-201ENST00000413601 NANOGP8Q6NSW7 305 aa13.13□□□□□ -0.31
LIMS4-201ENST00000413601 ATG4DQ86TL0 474 aaPredicted RBP13.13□□□□□ -0.31
LIMS4-201ENST00000413601 ARMC8Q8IUR7 673 aa13.13□□□□□ -0.31
LIMS4-201ENST00000413601 ZNF100Q8IYN0 542 aa13.13□□□□□ -0.31
LIMS4-201ENST00000413601 OR10A6Q8NH74 314 aa13.13□□□□□ -0.31
LIMS4-201ENST00000413601 S100PBPQ96BU1 408 aa13.13□□□□□ -0.31
LIMS4-201ENST00000413601 NAA11Q9BSU3 229 aaPredicted RBP13.13□□□□□ -0.31
LIMS4-201ENST00000413601 PRR14Q9BWN1 585 aa13.13□□□□□ -0.31
LIMS4-201ENST00000413601 NANOGQ9H9S0 305 aa13.13□□□□□ -0.31
LIMS4-201ENST00000413601 CCM2LQ9NUG4 571 aaPredicted RBP13.13□□□□□ -0.31
LIMS4-201ENST00000413601 MRGBPQ9NV56 204 aa13.13□□□□□ -0.31
LIMS4-201ENST00000413601 EMC3Q9P0I2 261 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms