RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 RSPO3Q9BXY4 272 aaPredicted RBP9.02□□□□□ -0.97
NCKIPSD-202ENST00000413374 IKZF5Q9H5V7 419 aa9.02□□□□□ -0.97
NCKIPSD-202ENST00000413374 GP6Q9HCN6 339 aa9.02□□□□□ -0.97
NCKIPSD-202ENST00000413374 ZNF446Q9NWS9 450 aa9.02□□□□□ -0.97
NCKIPSD-202ENST00000413374 THUMPD1Q9NXG2 353 aaKnown RBP9.02□□□□□ -0.97
NCKIPSD-202ENST00000413374 IFT52Q9Y366 437 aa9.02□□□□□ -0.97
NCKIPSD-202ENST00000413374 HDGFL3Q9Y3E1 203 aa9.02□□□□□ -0.97
NCKIPSD-202ENST00000413374 MED12LQ86YW9 2145 aa9.02□□□□□ -0.97
NCKIPSD-202ENST00000413374 OTOGQ6ZRI0 2925 aa9.01□□□□□ -0.97
NCKIPSD-202ENST00000413374 ZNF716A6NP11 495 aa9.01□□□□□ -0.97
NCKIPSD-202ENST00000413374 ZNF724A8MTY0 619 aa9.01□□□□□ -0.97
NCKIPSD-202ENST00000413374 EVPLLA8MZ36 301 aa9.01□□□□□ -0.97
NCKIPSD-202ENST00000413374 TPST1O60507 370 aa9.01□□□□□ -0.97
NCKIPSD-202ENST00000413374 AKR7A3O95154 331 aa9.01□□□□□ -0.97
NCKIPSD-202ENST00000413374 GOSR1O95249 250 aa9.01□□□□□ -0.97
NCKIPSD-202ENST00000413374 THBS1P07996 1170 aa9.01□□□□□ -0.97
NCKIPSD-202ENST00000413374 CD99P14209 185 aa9.01□□□□□ -0.97
NCKIPSD-202ENST00000413374 PPP3CBP16298 524 aa9.01□□□□□ -0.97
NCKIPSD-202ENST00000413374 IGHV1-2P23083 117 aa9.01□□□□□ -0.97
NCKIPSD-202ENST00000413374 ADSLP30566 484 aaPredicted RBP9.01□□□□□ -0.97
NCKIPSD-202ENST00000413374 IDUAP35475 653 aa9.01□□□□□ -0.97
NCKIPSD-202ENST00000413374 CLK1P49759 484 aaKnown RBP9.01□□□□□ -0.97
NCKIPSD-202ENST00000413374 FOXG1P55316 489 aaPredicted RBP9.01□□□□□ -0.97
NCKIPSD-202ENST00000413374 SLC35A1P78382 337 aa9.01□□□□□ -0.97
NCKIPSD-202ENST00000413374 CDK6Q00534 326 aa9.01□□□□□ -0.97
NCKIPSD-202ENST00000413374 FADDQ13158 208 aa9.01□□□□□ -0.97
NCKIPSD-202ENST00000413374 ITGADQ13349 1161 aa9.01□□□□□ -0.97
NCKIPSD-202ENST00000413374 SELPLGQ14242 412 aa9.01□□□□□ -0.97
NCKIPSD-202ENST00000413374 TAB1Q15750 504 aa9.01□□□□□ -0.97
NCKIPSD-202ENST00000413374 RUNDC3AQ59EK9 446 aa9.01□□□□□ -0.97
NCKIPSD-202ENST00000413374 BEX5Q5H9J7 111 aa9.01□□□□□ -0.97
NCKIPSD-202ENST00000413374 RNF220Q5VTB9 566 aa9.01□□□□□ -0.97
NCKIPSD-202ENST00000413374 C9orf135Q5VTT2 229 aa9.01□□□□□ -0.97
NCKIPSD-202ENST00000413374 ABLIM2Q6H8Q1 611 aa9.01□□□□□ -0.97
NCKIPSD-202ENST00000413374 WBP2NLQ6ICG8 309 aa9.01□□□□□ -0.97
NCKIPSD-202ENST00000413374 DLEU7Q6UYE1 221 aa9.01□□□□□ -0.97
NCKIPSD-202ENST00000413374 RETREG3Q86VR2 466 aa9.01□□□□□ -0.97
NCKIPSD-202ENST00000413374 TMEM99Q8N816 258 aa9.01□□□□□ -0.97
NCKIPSD-202ENST00000413374 OR52E4Q8NGH9 312 aa9.01□□□□□ -0.97
NCKIPSD-202ENST00000413374 BBS10Q8TAM1 723 aa9.01□□□□□ -0.97
NCKIPSD-202ENST00000413374 RNF217Q8TC41 542 aa9.01□□□□□ -0.97
NCKIPSD-202ENST00000413374 KISS1RQ969F8 398 aaPredicted RBP9.01□□□□□ -0.97
NCKIPSD-202ENST00000413374 TACO1Q9BSH4 297 aaKnown RBP9.01□□□□□ -0.97
NCKIPSD-202ENST00000413374 TMEM120AQ9BXJ8 343 aa9.01□□□□□ -0.97
NCKIPSD-202ENST00000413374 HDHD5Q9BXW7 423 aa9.01□□□□□ -0.97
NCKIPSD-202ENST00000413374 CXXC4Q9H2H0 198 aa9.01□□□□□ -0.97
NCKIPSD-202ENST00000413374 RABEP2Q9H5N1 569 aa9.01□□□□□ -0.97
NCKIPSD-202ENST00000413374 PIF1Q9H611 641 aa9.01□□□□□ -0.97
NCKIPSD-202ENST00000413374 ARMC7Q9H6L4 198 aa9.01□□□□□ -0.97
NCKIPSD-202ENST00000413374 BCL2L10Q9HD36 194 aa9.01□□□□□ -0.97
NCKIPSD-202ENST00000413374 LEF1Q9UJU2 399 aaPredicted RBP9.01□□□□□ -0.97
NCKIPSD-202ENST00000413374 TRIM33Q9UPN9 1127 aa9.01□□□□□ -0.97
NCKIPSD-202ENST00000413374 NDUFAF1Q9Y375 327 aa9.01□□□□□ -0.97
NCKIPSD-202ENST00000413374 TACC2O95359 2948 aa9.01□□□□□ -0.97
NCKIPSD-202ENST00000413374 A0A1W2PR80 420 aa9□□□□□ -0.97
NCKIPSD-202ENST00000413374 CIB4A0PJX0 185 aa9□□□□□ -0.97
NCKIPSD-202ENST00000413374 CCT8L1PA6NM43 557 aa9□□□□□ -0.97
NCKIPSD-202ENST00000413374 FAAHO00519 579 aa9□□□□□ -0.97
NCKIPSD-202ENST00000413374 ANGPT2O15123 496 aa9□□□□□ -0.97
NCKIPSD-202ENST00000413374 CLOCKO15516 846 aa9□□□□□ -0.97
NCKIPSD-202ENST00000413374 ZNF208O43345 1280 aa9□□□□□ -0.97
NCKIPSD-202ENST00000413374 MRPL33O75394 65 aaKnown RBP9□□□□□ -0.97
NCKIPSD-202ENST00000413374 VIMP08670 466 aaKnown RBP9□□□□□ -0.97
NCKIPSD-202ENST00000413374 ARAFP10398 606 aa9□□□□□ -0.97
NCKIPSD-202ENST00000413374 BMP2P12643 396 aa9□□□□□ -0.97
NCKIPSD-202ENST00000413374 PTNP21246 168 aa9□□□□□ -0.97
NCKIPSD-202ENST00000413374 CBLP22681 906 aa9□□□□□ -0.97
NCKIPSD-202ENST00000413374 SLC6A2P23975 617 aa9□□□□□ -0.97
NCKIPSD-202ENST00000413374 FKBP2P26885 142 aaKnown RBP9□□□□□ -0.97
NCKIPSD-202ENST00000413374 MTPNP58546 118 aa9□□□□□ -0.97
NCKIPSD-202ENST00000413374 ADAM8P78325 824 aa9□□□□□ -0.97
NCKIPSD-202ENST00000413374 FAPQ12884 760 aa9□□□□□ -0.97
NCKIPSD-202ENST00000413374 FOXD4Q12950 439 aaPredicted RBP9□□□□□ -0.97
NCKIPSD-202ENST00000413374 NFYCQ13952 458 aa9□□□□□ -0.97
NCKIPSD-202ENST00000413374 SCARB2Q14108 478 aa9□□□□□ -0.97
NCKIPSD-202ENST00000413374 P2RY6Q15077 328 aa9□□□□□ -0.97
NCKIPSD-202ENST00000413374 OTUD3Q5T2D3 398 aaPredicted RBP9□□□□□ -0.97
NCKIPSD-202ENST00000413374 REEP3Q6NUK4 255 aa9□□□□□ -0.97
NCKIPSD-202ENST00000413374 ZNF704Q6ZNC4 412 aaPredicted RBP9□□□□□ -0.97
NCKIPSD-202ENST00000413374 Q6ZT83 130 aa9□□□□□ -0.97
NCKIPSD-202ENST00000413374 DHDDSQ86SQ9 333 aa9□□□□□ -0.97
NCKIPSD-202ENST00000413374 COMTD1Q86VU5 262 aa9□□□□□ -0.97
NCKIPSD-202ENST00000413374 TGIF2LYQ8IUE0 185 aa9□□□□□ -0.97
NCKIPSD-202ENST00000413374 P3H2Q8IVL5 708 aa9□□□□□ -0.97
NCKIPSD-202ENST00000413374 PIAS4Q8N2W9 510 aaPredicted RBP9□□□□□ -0.97
NCKIPSD-202ENST00000413374 WFDC11Q8NEX6 87 aa9□□□□□ -0.97
NCKIPSD-202ENST00000413374 PIGXQ8TBF5 258 aa9□□□□□ -0.97
NCKIPSD-202ENST00000413374 APH1AQ96BI3 265 aa9□□□□□ -0.97
NCKIPSD-202ENST00000413374 C3orf49Q96BT1 292 aa9□□□□□ -0.97
NCKIPSD-202ENST00000413374 SLC25A36Q96CQ1 311 aa9□□□□□ -0.97
NCKIPSD-202ENST00000413374 MBD6Q96DN6 1003 aa9□□□□□ -0.97
NCKIPSD-202ENST00000413374 ALPK1Q96QP1 1244 aa9□□□□□ -0.97
NCKIPSD-202ENST00000413374 WFDC6Q9BQY6 131 aa9□□□□□ -0.97
NCKIPSD-202ENST00000413374 TAPBPLQ9BX59 468 aa9□□□□□ -0.97
NCKIPSD-202ENST00000413374 C1QTNF6Q9BXI9 259 aa9□□□□□ -0.97
NCKIPSD-202ENST00000413374 ZNF385DQ9H6B1 395 aa9□□□□□ -0.97
NCKIPSD-202ENST00000413374 FGFR1OP2Q9NVK5 253 aa9□□□□□ -0.97
NCKIPSD-202ENST00000413374 ADPRHL2Q9NX46 363 aa9□□□□□ -0.97
NCKIPSD-202ENST00000413374 EMC3Q9P0I2 261 aa9□□□□□ -0.97
NCKIPSD-202ENST00000413374 RPS6KB2Q9UBS0 482 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms