RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 ELOA3BQ3SY89 546 aa12.44□□□□□ -0.42
LIMS1-205ENST00000410093 EMC4Q5J8M3 183 aa12.44□□□□□ -0.42
LIMS1-205ENST00000410093 ARHGAP40Q5TG30 622 aa12.44□□□□□ -0.42
LIMS1-205ENST00000410093 AGAP7PQ5VUJ5 663 aa12.44□□□□□ -0.42
LIMS1-205ENST00000410093 LYSMD4Q5XG99 296 aa12.44□□□□□ -0.42
LIMS1-205ENST00000410093 MZT2AQ6P582 158 aa12.44□□□□□ -0.42
LIMS1-205ENST00000410093 PAMR1Q6UXH9 720 aa12.44□□□□□ -0.42
LIMS1-205ENST00000410093 THSD4Q6ZMP0 1018 aa12.44□□□□□ -0.42
LIMS1-205ENST00000410093 BPHLQ86WA6 291 aaPredicted RBP12.44□□□□□ -0.42
LIMS1-205ENST00000410093 ARIH2OSQ8N7S6 290 aa12.44□□□□□ -0.42
LIMS1-205ENST00000410093 ZSCAN1Q8NBB4 408 aa12.44□□□□□ -0.42
LIMS1-205ENST00000410093 ATP6V1C2Q8NEY4 427 aa12.44□□□□□ -0.42
LIMS1-205ENST00000410093 ELOA3Q8NG57 546 aa12.44□□□□□ -0.42
LIMS1-205ENST00000410093 OR51A7Q8NH64 312 aa12.44□□□□□ -0.42
LIMS1-205ENST00000410093 ZNF721Q8TF20 911 aa12.44□□□□□ -0.42
LIMS1-205ENST00000410093 SPRYD4Q8WW59 207 aaPredicted RBP12.44□□□□□ -0.42
LIMS1-205ENST00000410093 PTP4A1Q93096 173 aa12.44□□□□□ -0.42
LIMS1-205ENST00000410093 C3orf49Q96BT1 292 aa12.44□□□□□ -0.42
LIMS1-205ENST00000410093 ZNF501Q96CX3 271 aaPredicted RBP12.44□□□□□ -0.42
LIMS1-205ENST00000410093 TMCO6Q96DC7 493 aa12.44□□□□□ -0.42
LIMS1-205ENST00000410093 TNFRSF13CQ96RJ3 184 aa12.44□□□□□ -0.42
LIMS1-205ENST00000410093 SNTG1Q9NSN8 517 aa12.44□□□□□ -0.42
LIMS1-205ENST00000410093 ADAM30Q9UKF2 790 aa12.44□□□□□ -0.42
LIMS1-205ENST00000410093 TRAV27A0A087WT01 109 aa12.43□□□□□ -0.42
LIMS1-205ENST00000410093 CCDC182A6NF36 153 aa12.43□□□□□ -0.42
LIMS1-205ENST00000410093 KHNYNO15037 678 aaKnown RBP12.43□□□□□ -0.42
LIMS1-205ENST00000410093 MAGEB3O15480 346 aa12.43□□□□□ -0.42
LIMS1-205ENST00000410093 PLPP2O43688 288 aa12.43□□□□□ -0.42
LIMS1-205ENST00000410093 RFPL3O75679 317 aa12.43□□□□□ -0.42
LIMS1-205ENST00000410093 UTS2O95399 124 aa12.43□□□□□ -0.42
LIMS1-205ENST00000410093 DDAH2O95865 285 aa12.43□□□□□ -0.42
LIMS1-205ENST00000410093 SERPINA3P01011 423 aa12.43□□□□□ -0.42
LIMS1-205ENST00000410093 HNRNPCP07910 306 aaKnown RBP eCLIP12.43□□□□□ -0.42
LIMS1-205ENST00000410093 OR2T7P0C7T2 308 aa12.43□□□□□ -0.42
LIMS1-205ENST00000410093 GIMD1P0DJR0 217 aa12.43□□□□□ -0.42
LIMS1-205ENST00000410093 IL12BP29460 328 aa12.43□□□□□ -0.42
LIMS1-205ENST00000410093 TNFSF8P32971 234 aa12.43□□□□□ -0.42
LIMS1-205ENST00000410093 SDC2P34741 201 aa12.43□□□□□ -0.42
LIMS1-205ENST00000410093 SEPHS1P49903 392 aa12.43□□□□□ -0.42
LIMS1-205ENST00000410093 RPS25P62851 125 aaKnown RBP12.43□□□□□ -0.42
LIMS1-205ENST00000410093 PPP3R1P63098 170 aa12.43□□□□□ -0.42
LIMS1-205ENST00000410093 IFITM3Q01628 133 aa12.43□□□□□ -0.42
LIMS1-205ENST00000410093 SF3A2Q15428 464 aaKnown RBP12.43□□□□□ -0.42
LIMS1-205ENST00000410093 NR0B2Q15466 257 aa12.43□□□□□ -0.42
LIMS1-205ENST00000410093 TBC1D25Q3MII6 688 aa12.43□□□□□ -0.42
LIMS1-205ENST00000410093 PERM1Q5SV97 790 aa12.43□□□□□ -0.42
LIMS1-205ENST00000410093 ZNF362Q5T0B9 420 aaPredicted RBP12.43□□□□□ -0.42
LIMS1-205ENST00000410093 C22orf42Q6IC83 251 aa12.43□□□□□ -0.42
LIMS1-205ENST00000410093 RHBDD2Q6NTF9 364 aa12.43□□□□□ -0.42
LIMS1-205ENST00000410093 MISPQ8IVT2 679 aa12.43□□□□□ -0.42
LIMS1-205ENST00000410093 SHISA5Q8N114 240 aa12.43□□□□□ -0.42
LIMS1-205ENST00000410093 SYS1Q8N2H4 156 aa12.43□□□□□ -0.42
LIMS1-205ENST00000410093 MS4A15Q8N5U1 240 aa12.43□□□□□ -0.42
LIMS1-205ENST00000410093 SIRT6Q8N6T7 355 aa12.43□□□□□ -0.42
LIMS1-205ENST00000410093 FAM181AQ8N9Y4 354 aa12.43□□□□□ -0.42
LIMS1-205ENST00000410093 BBS1Q8NFJ9 593 aa12.43□□□□□ -0.42
LIMS1-205ENST00000410093 OR1N1Q8NGS0 311 aa12.43□□□□□ -0.42
LIMS1-205ENST00000410093 OR2T27Q8NH04 317 aa12.43□□□□□ -0.42
LIMS1-205ENST00000410093 PIGKQ92643 395 aa12.43□□□□□ -0.42
LIMS1-205ENST00000410093 KISS1RQ969F8 398 aaPredicted RBP12.43□□□□□ -0.42
LIMS1-205ENST00000410093 TP53INP1Q96A56 240 aa12.43□□□□□ -0.42
LIMS1-205ENST00000410093 OTULINQ96BN8 352 aa12.43□□□□□ -0.42
LIMS1-205ENST00000410093 ERMAPQ96PL5 475 aaPredicted RBP12.43□□□□□ -0.42
LIMS1-205ENST00000410093 FGF21Q9NSA1 209 aa12.43□□□□□ -0.42
LIMS1-205ENST00000410093 MAU2Q9Y6X3 613 aa12.43□□□□□ -0.42
LIMS1-205ENST00000410093 WDR87Q6ZQQ6 2873 aa12.43□□□□□ -0.42
LIMS1-205ENST00000410093 ADAMTS20P59510 1910 aa12.43□□□□□ -0.42
LIMS1-205ENST00000410093 ABCA7Q8IZY2 2146 aa12.43□□□□□ -0.42
LIMS1-205ENST00000410093 ZNF292O60281 2723 aa12.42□□□□□ -0.42
LIMS1-205ENST00000410093 IGLV3-12A0A075B6K2 115 aa12.42□□□□□ -0.42
LIMS1-205ENST00000410093 CDC40O60508 579 aaKnown RBP eCLIP12.42□□□□□ -0.42
LIMS1-205ENST00000410093 ADAM11O75078 769 aa12.42□□□□□ -0.42
LIMS1-205ENST00000410093 TMEM127O75204 238 aa12.42□□□□□ -0.42
LIMS1-205ENST00000410093 RGS9O75916 674 aaPredicted RBP12.42□□□□□ -0.42
LIMS1-205ENST00000410093 PPP1R3DO95685 299 aa12.42□□□□□ -0.42
LIMS1-205ENST00000410093 ONECUT2O95948 504 aa12.42□□□□□ -0.42
LIMS1-205ENST00000410093 CELP19835 753 aa12.42□□□□□ -0.42
LIMS1-205ENST00000410093 EPHA8P29322 1005 aaPredicted RBP12.42□□□□□ -0.42
LIMS1-205ENST00000410093 OR1D4P47884 311 aa12.42□□□□□ -0.42
LIMS1-205ENST00000410093 MTNR1BP49286 362 aa12.42□□□□□ -0.42
LIMS1-205ENST00000410093 RPS7P62081 194 aaKnown RBP12.42□□□□□ -0.42
LIMS1-205ENST00000410093 FABP5Q01469 135 aa12.42□□□□□ -0.42
LIMS1-205ENST00000410093 CFHR1Q03591 330 aa12.42□□□□□ -0.42
LIMS1-205ENST00000410093 FHL1Q13642 323 aa12.42□□□□□ -0.42
LIMS1-205ENST00000410093 DOC2BQ14184 412 aa12.42□□□□□ -0.42
LIMS1-205ENST00000410093 KCNAB1Q14722 419 aa12.42□□□□□ -0.42
LIMS1-205ENST00000410093 EBPQ15125 230 aaKnown RBP12.42□□□□□ -0.42
LIMS1-205ENST00000410093 NSDHLQ15738 373 aa12.42□□□□□ -0.42
LIMS1-205ENST00000410093 KLHL12Q53G59 568 aa12.42□□□□□ -0.42
LIMS1-205ENST00000410093 PLA2G2CQ5R387 149 aa12.42□□□□□ -0.42
LIMS1-205ENST00000410093 SLC35F1Q5T1Q4 408 aa12.42□□□□□ -0.42
LIMS1-205ENST00000410093 XKRXQ6PP77 449 aa12.42□□□□□ -0.42
LIMS1-205ENST00000410093 C5orf46Q6UWT4 87 aa12.42□□□□□ -0.42
LIMS1-205ENST00000410093 ATG4DQ86TL0 474 aaPredicted RBP12.42□□□□□ -0.42
LIMS1-205ENST00000410093 SLC22A16Q86VW1 577 aa12.42□□□□□ -0.42
LIMS1-205ENST00000410093 TPRA1Q86W33 373 aa12.42□□□□□ -0.42
LIMS1-205ENST00000410093 METTL27Q8N6F8 245 aaPredicted RBP12.42□□□□□ -0.42
LIMS1-205ENST00000410093 GDPD1Q8N9F7 314 aa12.42□□□□□ -0.42
LIMS1-205ENST00000410093 PHOSPHO1Q8TCT1 267 aa12.42□□□□□ -0.42
LIMS1-205ENST00000410093 NAT6Q93015 286 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms