RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 PM20D2Q8IYS1 436 aa13.69□□□□□ -0.22
LSM5-207ENST00000410044 ST6GALNAC3Q8NDV1 305 aa13.69□□□□□ -0.22
LSM5-207ENST00000410044 SLC7A13Q8TCU3 470 aa13.69□□□□□ -0.22
LSM5-207ENST00000410044 TMEM239Q8WW34 195 aa13.69□□□□□ -0.22
LSM5-207ENST00000410044 KLHL15Q96M94 604 aa13.69□□□□□ -0.22
LSM5-207ENST00000410044 EPYCQ99645 322 aa13.69□□□□□ -0.22
LSM5-207ENST00000410044 NTN4Q9HB63 628 aa13.69□□□□□ -0.22
LSM5-207ENST00000410044 LYVE1Q9Y5Y7 322 aa13.69□□□□□ -0.22
LSM5-207ENST00000410044 SVILO95425 2214 aa13.68□□□□□ -0.22
LSM5-207ENST00000410044 SH3PXD2BA1X283 911 aa13.68□□□□□ -0.22
LSM5-207ENST00000410044 ZC3H12DA2A288 527 aaKnown RBP13.68□□□□□ -0.22
LSM5-207ENST00000410044 AHRRA9YTQ3 701 aa13.68□□□□□ -0.22
LSM5-207ENST00000410044 OR2T1O43869 369 aa13.68□□□□□ -0.22
LSM5-207ENST00000410044 PMS2P2O95744 297 aa13.68□□□□□ -0.22
LSM5-207ENST00000410044 CCNA2P20248 432 aa13.68□□□□□ -0.22
LSM5-207ENST00000410044 PTGS2P35354 604 aa13.68□□□□□ -0.22
LSM5-207ENST00000410044 CLDN20P56880 219 aa13.68□□□□□ -0.22
LSM5-207ENST00000410044 HSF1Q00613 529 aa13.68□□□□□ -0.22
LSM5-207ENST00000410044 SPIBQ01892 262 aa13.68□□□□□ -0.22
LSM5-207ENST00000410044 PRKCDQ05655 676 aa13.68□□□□□ -0.22
LSM5-207ENST00000410044 GXYLT1Q4G148 440 aa13.68□□□□□ -0.22
LSM5-207ENST00000410044 PDSS1Q5T2R2 415 aa13.68□□□□□ -0.22
LSM5-207ENST00000410044 WLSQ5T9L3 541 aa13.68□□□□□ -0.22
LSM5-207ENST00000410044 C1orf140Q5VVS0 124 aa13.68□□□□□ -0.22
LSM5-207ENST00000410044 PODNL1Q6PEZ8 512 aa13.68□□□□□ -0.22
LSM5-207ENST00000410044 TMPPEQ6ZT21 453 aa13.68□□□□□ -0.22
LSM5-207ENST00000410044 ZNF843Q8N446 348 aa13.68□□□□□ -0.22
LSM5-207ENST00000410044 LINC00471Q8N535 108 aa13.68□□□□□ -0.22
LSM5-207ENST00000410044 MEIOBQ8N635 442 aa13.68□□□□□ -0.22
LSM5-207ENST00000410044 MFSD8Q8NHS3 518 aa13.68□□□□□ -0.22
LSM5-207ENST00000410044 RNF217Q8TC41 542 aa13.68□□□□□ -0.22
LSM5-207ENST00000410044 ZPLD1Q8TCW7 415 aa13.68□□□□□ -0.22
LSM5-207ENST00000410044 TMEM255BQ8WV15 326 aa13.68□□□□□ -0.22
LSM5-207ENST00000410044 LIPHQ8WWY8 451 aa13.68□□□□□ -0.22
LSM5-207ENST00000410044 NRBF2Q96F24 287 aa13.68□□□□□ -0.22
LSM5-207ENST00000410044 ARL5BQ96KC2 179 aa13.68□□□□□ -0.22
LSM5-207ENST00000410044 ALPK1Q96QP1 1244 aa13.68□□□□□ -0.22
LSM5-207ENST00000410044 UCN2Q96RP3 112 aa13.68□□□□□ -0.22
LSM5-207ENST00000410044 BDH2Q9BUT1 245 aa13.68□□□□□ -0.22
LSM5-207ENST00000410044 PTDSS2Q9BVG9 487 aa13.68□□□□□ -0.22
LSM5-207ENST00000410044 OR11A1Q9GZK7 315 aa13.68□□□□□ -0.22
LSM5-207ENST00000410044 COQ10BQ9H8M1 238 aa13.68□□□□□ -0.22
LSM5-207ENST00000410044 REEP1Q9H902 201 aa13.68□□□□□ -0.22
LSM5-207ENST00000410044 MEPEQ9NQ76 525 aaPredicted RBP13.68□□□□□ -0.22
LSM5-207ENST00000410044 PAQR5Q9NXK6 330 aaPredicted RBP13.68□□□□□ -0.22
LSM5-207ENST00000410044 MED31Q9Y3C7 131 aa13.68□□□□□ -0.22
LSM5-207ENST00000410044 IGSF10Q6WRI0 2623 aa13.67□□□□□ -0.22
LSM5-207ENST00000410044 TRAV36DV7A0A075B6V5 113 aa13.67□□□□□ -0.22
LSM5-207ENST00000410044 TRBV4-1A0A0J9YWV2 114 aa13.67□□□□□ -0.22
LSM5-207ENST00000410044 FTCDNL1E5RQL4 147 aa13.67□□□□□ -0.22
LSM5-207ENST00000410044 NPIPA2E9PIF3 369 aa13.67□□□□□ -0.22
LSM5-207ENST00000410044 NPIPA3F8WFD2 350 aa13.67□□□□□ -0.22
LSM5-207ENST00000410044 TNFRSF11BO00300 401 aa13.67□□□□□ -0.22
LSM5-207ENST00000410044 DNPH1O43598 174 aa13.67□□□□□ -0.22
LSM5-207ENST00000410044 LDLRP01130 860 aa13.67□□□□□ -0.22
LSM5-207ENST00000410044 IMPDH2P12268 514 aa13.67□□□□□ -0.22
LSM5-207ENST00000410044 DNAJA1P31689 397 aaKnown RBP13.67□□□□□ -0.22
LSM5-207ENST00000410044 UGT2B15P54855 530 aa13.67□□□□□ -0.22
LSM5-207ENST00000410044 CTBP2P56545 445 aa13.67□□□□□ -0.22
LSM5-207ENST00000410044 RAC3P60763 192 aa13.67□□□□□ -0.22
LSM5-207ENST00000410044 EMC4Q5J8M3 183 aa13.67□□□□□ -0.22
LSM5-207ENST00000410044 C1QL3Q5VWW1 255 aa13.67□□□□□ -0.22
LSM5-207ENST00000410044 HMBOX1Q6NT76 420 aa13.67□□□□□ -0.22
LSM5-207ENST00000410044 GFRALQ6UXV0 394 aa13.67□□□□□ -0.22
LSM5-207ENST00000410044 MBOAT2Q6ZWT7 520 aa13.67□□□□□ -0.22
LSM5-207ENST00000410044 ADGRE4PQ86SQ3 457 aa13.67□□□□□ -0.22
LSM5-207ENST00000410044 ATP6V1C2Q8NEY4 427 aa13.67□□□□□ -0.22
LSM5-207ENST00000410044 OR2V1Q8NHB1 315 aa13.67□□□□□ -0.22
LSM5-207ENST00000410044 FAM57AQ8TBR7 257 aa13.67□□□□□ -0.22
LSM5-207ENST00000410044 LRTOMTQ8WZ04 291 aa13.67□□□□□ -0.22
LSM5-207ENST00000410044 STMN2Q93045 179 aa13.67□□□□□ -0.22
LSM5-207ENST00000410044 TAAR8Q969N4 342 aa13.67□□□□□ -0.22
LSM5-207ENST00000410044 MIB2Q96AX9 1013 aa13.67□□□□□ -0.22
LSM5-207ENST00000410044 KTI12Q96EK9 354 aaPredicted RBP13.67□□□□□ -0.22
LSM5-207ENST00000410044 KLHL4Q9C0H6 718 aa13.67□□□□□ -0.22
LSM5-207ENST00000410044 VNN3Q9NY84 501 aa13.67□□□□□ -0.22
LSM5-207ENST00000410044 TMCC3Q9ULS5 477 aa13.67□□□□□ -0.22
LSM5-207ENST00000410044 SAMHD1Q9Y3Z3 626 aaKnown RBP13.67□□□□□ -0.22
LSM5-207ENST00000410044 A0A1W2PNR3 127 aa13.66□□□□□ -0.22
LSM5-207ENST00000410044 LIPT2A6NK58 231 aa13.66□□□□□ -0.22
LSM5-207ENST00000410044 GNGT2O14610 69 aa13.66□□□□□ -0.22
LSM5-207ENST00000410044 C1QL1O75973 258 aa13.66□□□□□ -0.22
LSM5-207ENST00000410044 AHSA1O95433 338 aa13.66□□□□□ -0.22
LSM5-207ENST00000410044 MT-ATP6P00846 226 aa13.66□□□□□ -0.22
LSM5-207ENST00000410044 BGLAPP02818 100 aa13.66□□□□□ -0.22
LSM5-207ENST00000410044 OPN1LWP04000 364 aa13.66□□□□□ -0.22
LSM5-207ENST00000410044 HOXD4P09016 255 aaPredicted RBP13.66□□□□□ -0.22
LSM5-207ENST00000410044 TFPIP10646 304 aa13.66□□□□□ -0.22
LSM5-207ENST00000410044 FPR1P21462 350 aa13.66□□□□□ -0.22
LSM5-207ENST00000410044 SFTPDP35247 375 aa13.66□□□□□ -0.22
LSM5-207ENST00000410044 IDUAP35475 653 aa13.66□□□□□ -0.22
LSM5-207ENST00000410044 AGFG1P52594 562 aaKnown RBP13.66□□□□□ -0.22
LSM5-207ENST00000410044 CARD18P57730 90 aa13.66□□□□□ -0.22
LSM5-207ENST00000410044 RPS3AP61247 264 aaKnown RBP13.66□□□□□ -0.22
LSM5-207ENST00000410044 RBPJQ06330 500 aa13.66□□□□□ -0.22
LSM5-207ENST00000410044 LTBQ06643 244 aa13.66□□□□□ -0.22
LSM5-207ENST00000410044 MYBPHQ13203 477 aa13.66□□□□□ -0.22
LSM5-207ENST00000410044 SF3B4Q15427 424 aaKnown RBP eCLIP13.66□□□□□ -0.221e-6■□□□□ 10.3
LSM5-207ENST00000410044 SEC23BQ15437 767 aa13.66□□□□□ -0.22
LSM5-207ENST00000410044 ZNF239Q16600 458 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms