RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 GPR143P51810 404 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 SUCLG1P53597 346 aaKnown RBP4.19□□□□□ -1.74
SF3B1-202ENST00000409915 GFERP55789 205 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 PPP1CAP62136 330 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 MC2RQ01718 297 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 HHEXQ03014 270 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 LIPEQ05469 1076 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 ZNF91Q05481 1191 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 HSPB3Q12988 150 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 PDIA2Q13087 525 aaKnown RBP4.19□□□□□ -1.74
SF3B1-202ENST00000409915 TBR1Q16650 682 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 SYT16Q17RD7 645 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 ZFP69Q49AA0 526 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 ZNF658BQ4V348 819 aaPredicted RBP4.19□□□□□ -1.74
SF3B1-202ENST00000409915 CTSL3PQ5NE16 218 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 Q5PR19 223 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 DCST1Q5T197 706 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 SFRP4Q6FHJ7 346 aaPredicted RBP4.19□□□□□ -1.74
SF3B1-202ENST00000409915 ZNF425Q6IV72 752 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 TRMT10BQ6PF06 316 aaKnown RBP4.19□□□□□ -1.74
SF3B1-202ENST00000409915 DLEU7Q6UYE1 221 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 ZNF782Q6ZMW2 699 aaPredicted RBP4.19□□□□□ -1.74
SF3B1-202ENST00000409915 LARP4Q71RC2 724 aaKnown RBP eCLIP4.19□□□□□ -1.74
SF3B1-202ENST00000409915 HIST3H2AQ7L7L0 130 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 NOXA1Q86UR1 476 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 COMTD1Q86VU5 262 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 SLC22A16Q86VW1 577 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 KCNMB4Q86W47 210 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 C17orf82Q86X59 251 aaPredicted RBP4.19□□□□□ -1.74
SF3B1-202ENST00000409915 SPPL2CQ8IUH8 684 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 VRK3Q8IV63 474 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 CMTM4Q8IZR5 234 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 TBC1D19Q8N5T2 526 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 LMNTD1Q8N9Z9 388 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 OR4M2Q8NGB6 313 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 OR6Q1Q8NGQ2 317 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 OR2L2Q8NH16 312 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 OR14L1PQ8NHC6 308 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 RHOXF1Q8NHV9 184 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 PYDC1Q8WXC3 89 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 ELMO1Q92556 727 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 TFAP2CQ92754 450 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 GTF2H4Q92759 462 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 SLC25A28Q96A46 364 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 ESAMQ96AP7 390 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 FKBP10Q96AY3 582 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 RASD2Q96D21 266 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 CXorf40BQ96DE9 158 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 LINGO1Q96FE5 620 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 OTUB1Q96FW1 271 aaPredicted RBP4.19□□□□□ -1.74
SF3B1-202ENST00000409915 ATXN7L3BQ96GX2 97 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 WDYHV1Q96HA8 205 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 MAGED4Q96JG8 741 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 CNBD2Q96M20 576 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 C12orf66Q96MD2 445 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 FOPNLQ96NB1 174 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 FYTTD1Q96QD9 318 aaKnown RBP4.19□□□□□ -1.74
SF3B1-202ENST00000409915 GFM1Q96RP9 751 aaKnown RBP4.19□□□□□ -1.74
SF3B1-202ENST00000409915 SLC38A3Q99624 504 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 CCM2Q9BSQ5 444 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 DCUN1D5Q9BTE7 237 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 THTPAQ9BU02 230 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 SHARPINQ9H0F6 387 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 ATG10Q9H0Y0 220 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 CDC42EP4Q9H3Q1 356 aaKnown RBP4.19□□□□□ -1.74
SF3B1-202ENST00000409915 LRRN3Q9H3W5 708 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 COG4Q9H9E3 785 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 MCCC2Q9HCC0 563 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 EQTNQ9NQ60 294 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 SLCO1C1Q9NYB5 712 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 MAT2BQ9NZL9 334 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 NLKQ9UBE8 527 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 COPG2Q9UBF2 871 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 FBXO5Q9UKT4 447 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 ACSL5Q9ULC5 683 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 SPATA2Q9UM82 520 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 PRPF19Q9UMS4 504 aaKnown RBP4.19□□□□□ -1.74
SF3B1-202ENST00000409915 COPS3Q9UNS2 423 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 DHDHQ9UQ10 334 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 MGAT4BQ9UQ53 548 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 RUVBL2Q9Y230 463 aaKnown RBP4.19□□□□□ -1.74
SF3B1-202ENST00000409915 COL27A1Q8IZC6 1860 aaPredicted RBP4.19□□□□□ -1.74
SF3B1-202ENST00000409915 DMXL2Q8TDJ6 3036 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 ZFC3H1O60293 1989 aaKnown RBP4.18□□□□□ -1.74
SF3B1-202ENST00000409915 IGHV1OR21-1A0A087WYE8 117 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 KIR2DS5A0A0G2JLQ3 304 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 A0A0G2JNG1 304 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 A0A1W2PN81 502 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 A0A1W2PNU3 283 aaPredicted RBP4.18□□□□□ -1.74
SF3B1-202ENST00000409915 C1orf226A1L170 272 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 ZAR1LA6NP61 321 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 ZNF879B4DU55 563 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 LOC110117498-PIK3R3F6TDL0 507 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 KIR2DS3K7RE56 304 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 NTN3O00634 580 aaPredicted RBP4.18□□□□□ -1.74
SF3B1-202ENST00000409915 PRMT5O14744 637 aaPredicted RBP4.18□□□□□ -1.74
SF3B1-202ENST00000409915 DSCR3O14972 297 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 FCGR3BO75015 233 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 UGT2B11O75310 529 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 NDUFS6O75380 124 aaKnown RBP4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms