RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 ELFN2Q5R3F8 820 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.74□□□□□ -1.81
CLK1-203ENST00000409769 FAM219BQ5XKK7 198 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 GPR139Q6DWJ6 353 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 AGTRAPQ6RW13 159 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 RNF165Q6ZSG1 346 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 FAM47EQ6ZV65 393 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 RPS27LQ71UM5 84 aaKnown RBP3.74□□□□□ -1.81
CLK1-203ENST00000409769 KRT74Q7RTS7 529 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 GOLGA7Q7Z5G4 137 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 RABEPKQ7Z6M1 372 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 PIGWQ7Z7B1 504 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 GKN2Q86XP6 184 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 SLC25A45Q8N413 288 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 DNAJC22Q8N4W6 341 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 ZNF781Q8N8C0 355 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 LINC01555Q8NAE3 123 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 POMGNT2Q8NAT1 580 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 SUMF1Q8NBK3 374 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 MAPK1IP1LQ8NDC0 245 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 PRSS33Q8NF86 280 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 OR52B6Q8NGF0 335 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 OR52E1Q8NGJ3 308 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 OR2L8Q8NGY9 312 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 FLVCR1-AS1Q8TAF5 88 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 AGAP11Q8TF27 550 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 SKA2Q8WVK7 121 aaPredicted RBP3.74□□□□□ -1.81
CLK1-203ENST00000409769 SSMEM1Q8WWF3 244 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 PATE1Q8WXA2 126 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 DYRK2Q92630 601 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 SPDL1Q96EA4 605 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 WDR34Q96EX3 536 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 GMPPAQ96IJ6 420 aaPredicted RBP3.74□□□□□ -1.81
CLK1-203ENST00000409769 ZNF382Q96SR6 550 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 SEPHS2Q99611 448 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 NRTNQ99748 197 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 EGFL8Q99944 293 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 NTMT1Q9BV86 223 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 ATG10Q9H0Y0 220 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 NOL11Q9H8H0 719 aaKnown RBP3.74□□□□□ -1.81
CLK1-203ENST00000409769 UCK1Q9HA47 277 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 KCNK13Q9HB14 408 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 SLC40A1Q9NP59 571 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 IMP3Q9NV31 184 aaKnown RBP3.74□□□□□ -1.81
CLK1-203ENST00000409769 FGFR1OP2Q9NVK5 253 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 HAO2Q9NYQ3 351 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 TMEM181Q9P2C4 612 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 CIDEBQ9UHD4 219 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 KCNK7Q9Y2U2 307 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 MAGED1Q9Y5V3 778 aaPredicted RBP3.74□□□□□ -1.81
CLK1-203ENST00000409769 HEBP2Q9Y5Z4 205 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 CSNK1G3Q9Y6M4 447 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 CROCCQ5TZA2 2017 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 A0A0C4DFX4 3053 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 A0A087WW49 117 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 MSGN1A6NI15 193 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 PDZK1P1A8MUH7 402 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 BTN3A3O00478 584 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 YKT6O15498 198 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 DFNA5O60443 496 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 SNX3O60493 162 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 SDC3O75056 442 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 ZFAND5O76080 213 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 HSPA4LO95757 839 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 OTCP00480 354 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 IGHV2-70P01814 119 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 VIMP08670 466 aaKnown RBP3.73□□□□□ -1.81
CLK1-203ENST00000409769 CTSEP14091 401 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 TSPAN8P19075 237 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 CD22P20273 847 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 SHMT2P34897 504 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 ARRB1P49407 418 aaPredicted RBP3.73□□□□□ -1.81
CLK1-203ENST00000409769 RPL14P50914 215 aaKnown RBP3.73□□□□□ -1.81
CLK1-203ENST00000409769 ALDH3A2P51648 485 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 FOXA1P55317 472 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 PKNOX1P55347 436 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 MAZP56270 477 aaKnown RBP3.73□□□□□ -1.81
CLK1-203ENST00000409769 ERVPABLB-1P60509 514 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 SNTB1Q13884 538 aaKnown RBP3.73□□□□□ -1.81
CLK1-203ENST00000409769 IL11RAQ14626 422 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 LPAL2Q16609 132 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 DEFB133Q30KQ1 61 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 HLA-BQ31612 363 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 GTDC1Q4AE62 458 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 C14orf28Q4W4Y0 310 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 SYT14P1Q58G82 188 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 CAPN13Q6MZZ7 669 aaPredicted RBP3.73□□□□□ -1.81
CLK1-203ENST00000409769 IL27RAQ6UWB1 636 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 TMEM26Q6ZUK4 368 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 TAF8Q7Z7C8 310 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 SYVN1Q86TM6 617 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 THOC6Q86W42 341 aaKnown RBP3.73□□□□□ -1.81
CLK1-203ENST00000409769 CRLF3Q8IUI8 442 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 KIRREL3Q8IZU9 778 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 ARL14Q8N4G2 192 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 CHCHD4Q8N4Q1 142 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 TEX9Q8N6V9 391 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 CCNYL1Q8N7R7 359 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 OR4F6Q8NGB9 312 aa3.73□□□□□ -1.81
CLK1-203ENST00000409769 OR2A1Q8NGT9 310 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms