RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 SMPD3Q9NY59 655 aaPredicted RBP18.5■□□□□ 0.55
CHKB-201ENST00000406938 TMEM5Q9Y2B1 443 aa18.5■□□□□ 0.55
CHKB-201ENST00000406938 POFUT2Q9Y2G5 429 aa18.5■□□□□ 0.55
CHKB-201ENST00000406938 OR2M5A3KFT3 312 aa18.49■□□□□ 0.55
CHKB-201ENST00000406938 A8MVM7 634 aa18.49■□□□□ 0.55
CHKB-201ENST00000406938 KLF4O43474 513 aa18.49■□□□□ 0.55
CHKB-201ENST00000406938 CELA3AP09093 270 aa18.49■□□□□ 0.55
CHKB-201ENST00000406938 MAKP20794 623 aa18.49■□□□□ 0.55
CHKB-201ENST00000406938 FPR3P25089 353 aa18.49■□□□□ 0.55
CHKB-201ENST00000406938 ELK4P28324 431 aa18.49■□□□□ 0.55
CHKB-201ENST00000406938 PPIAP62937 165 aaKnown RBP18.49■□□□□ 0.55
CHKB-201ENST00000406938 ALDH6A1Q02252 535 aaKnown RBP18.49■□□□□ 0.55
CHKB-201ENST00000406938 SELENBP1Q13228 472 aa18.49■□□□□ 0.55
CHKB-201ENST00000406938 LINC00303Q3SY05 128 aa18.49■□□□□ 0.55
CHKB-201ENST00000406938 GLYR1Q49A26 553 aaPredicted RBP18.49■□□□□ 0.55
CHKB-201ENST00000406938 KLHL17Q6TDP4 642 aa18.49■□□□□ 0.55
CHKB-201ENST00000406938 SLC22A16Q86VW1 577 aa18.49■□□□□ 0.55
CHKB-201ENST00000406938 ATP6V1C2Q8NEY4 427 aa18.49■□□□□ 0.55
CHKB-201ENST00000406938 GNPDA2Q8TDQ7 276 aa18.49■□□□□ 0.55
CHKB-201ENST00000406938 RELTQ969Z4 430 aa18.49■□□□□ 0.55
CHKB-201ENST00000406938 KTI12Q96EK9 354 aaPredicted RBP18.49■□□□□ 0.55
CHKB-201ENST00000406938 MFRPQ9BY79 579 aa18.49■□□□□ 0.55
CHKB-201ENST00000406938 TMEM185BQ9H7F4 350 aa18.49■□□□□ 0.55
CHKB-201ENST00000406938 SERINC1Q9NRX5 453 aa18.49■□□□□ 0.55
CHKB-201ENST00000406938 MRPS18CQ9Y3D5 142 aaKnown RBP18.49■□□□□ 0.55
CHKB-201ENST00000406938 ORC6Q9Y5N6 252 aa18.49■□□□□ 0.55
CHKB-201ENST00000406938 CACNA1GO43497 2377 aa18.49■□□□□ 0.55
CHKB-201ENST00000406938 H3BML4 177 aa18.49■□□□□ 0.55
CHKB-201ENST00000406938 ACOT7O00154 380 aa18.49■□□□□ 0.55
CHKB-201ENST00000406938 CDC42EP2O14613 210 aa18.49■□□□□ 0.55
CHKB-201ENST00000406938 ZNF208O43345 1280 aa18.49■□□□□ 0.55
CHKB-201ENST00000406938 NPIPB7O75200 414 aa18.49■□□□□ 0.55
CHKB-201ENST00000406938 SNAP29O95721 258 aa18.49■□□□□ 0.55
CHKB-201ENST00000406938 HPNP05981 417 aa18.49■□□□□ 0.55
CHKB-201ENST00000406938 PEPDP12955 493 aa18.49■□□□□ 0.55
CHKB-201ENST00000406938 GSSP48637 474 aa18.49■□□□□ 0.55
CHKB-201ENST00000406938 B3GALT5-AS1P59052 145 aa18.49■□□□□ 0.55
CHKB-201ENST00000406938 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.49■□□□□ 0.55
CHKB-201ENST00000406938 WIPI1Q5MNZ9 446 aaPredicted RBP18.49■□□□□ 0.55
CHKB-201ENST00000406938 ASB18Q6ZVZ8 466 aa18.49■□□□□ 0.55
CHKB-201ENST00000406938 CDK20Q8IZL9 346 aa18.49■□□□□ 0.55
CHKB-201ENST00000406938 DNAJC9Q8WXX5 260 aa18.49■□□□□ 0.55
CHKB-201ENST00000406938 ZNF184Q99676 751 aaPredicted RBP18.49■□□□□ 0.55
CHKB-201ENST00000406938 ARHGAP9Q9BRR9 750 aa18.49■□□□□ 0.55
CHKB-201ENST00000406938 UCK2Q9BZX2 261 aa18.49■□□□□ 0.55
CHKB-201ENST00000406938 ZMIZ1Q9ULJ6 1067 aa18.49■□□□□ 0.55
CHKB-201ENST00000406938 NCKAP5O14513 1909 aa18.49■□□□□ 0.55
CHKB-201ENST00000406938 ZZEF1O43149 2961 aa18.48■□□□□ 0.55
CHKB-201ENST00000406938 H0YJX3 145 aa18.48■□□□□ 0.55
CHKB-201ENST00000406938 IGF2P01344 180 aa18.48■□□□□ 0.55
CHKB-201ENST00000406938 RPS5P46782 204 aaKnown RBP18.48■□□□□ 0.55
CHKB-201ENST00000406938 MAP2K6P52564 334 aa18.48■□□□□ 0.55
CHKB-201ENST00000406938 RAD23AP54725 363 aa18.48■□□□□ 0.55
CHKB-201ENST00000406938 TSPAN31Q12999 210 aa18.48■□□□□ 0.55
CHKB-201ENST00000406938 ZIK1Q3SY52 487 aaPredicted RBP18.48■□□□□ 0.55
CHKB-201ENST00000406938 SYT14P1Q58G82 188 aa18.48■□□□□ 0.55
CHKB-201ENST00000406938 RNFT1Q5M7Z0 435 aa18.48■□□□□ 0.55
CHKB-201ENST00000406938 C1QL3Q5VWW1 255 aa18.48■□□□□ 0.55
CHKB-201ENST00000406938 FAM109AQ8N4B1 249 aa18.48■□□□□ 0.55
CHKB-201ENST00000406938 STK35Q8TDR2 534 aa18.48■□□□□ 0.55
CHKB-201ENST00000406938 DDIT4LQ96D03 193 aa18.48■□□□□ 0.55
CHKB-201ENST00000406938 SGTBQ96EQ0 304 aa18.48■□□□□ 0.55
CHKB-201ENST00000406938 DNAJA3Q96EY1 480 aa18.48■□□□□ 0.55
CHKB-201ENST00000406938 TOR3AQ9H497 397 aa18.48■□□□□ 0.55
CHKB-201ENST00000406938 PRORYQ9H606 182 aa18.48■□□□□ 0.55
CHKB-201ENST00000406938 QPCTLQ9NXS2 382 aa18.48■□□□□ 0.55
CHKB-201ENST00000406938 B3GNT3Q9Y2A9 372 aa18.48■□□□□ 0.55
CHKB-201ENST00000406938 SPIN1Q9Y657 262 aaPredicted RBP18.48■□□□□ 0.55
CHKB-201ENST00000406938 TRAV36DV7A0A075B6V5 113 aa18.47■□□□□ 0.55
CHKB-201ENST00000406938 LRRN3E7EW58 273 aa18.47■□□□□ 0.55
CHKB-201ENST00000406938 SAGP10523 405 aaPredicted RBP18.47■□□□□ 0.55
CHKB-201ENST00000406938 ZNF24P17028 368 aa18.47■□□□□ 0.55
CHKB-201ENST00000406938 FUT1P19526 365 aa18.47■□□□□ 0.55
CHKB-201ENST00000406938 GSTM3P21266 225 aa18.47■□□□□ 0.55
CHKB-201ENST00000406938 RFX4Q33E94 735 aa18.47■□□□□ 0.55
CHKB-201ENST00000406938 C1orf140Q5VVS0 124 aa18.47■□□□□ 0.55
CHKB-201ENST00000406938 C5orf46Q6UWT4 87 aa18.47■□□□□ 0.55
CHKB-201ENST00000406938 CD300LDQ6UXZ3 194 aa18.47■□□□□ 0.55
CHKB-201ENST00000406938 TMPRSS11FQ6ZWK6 438 aa18.47■□□□□ 0.55
CHKB-201ENST00000406938 SLC46A3Q7Z3Q1 461 aa18.47■□□□□ 0.55
CHKB-201ENST00000406938 PARP8Q8N3A8 854 aa18.47■□□□□ 0.55
CHKB-201ENST00000406938 C9orf43Q8TAL5 461 aaPredicted RBP18.47■□□□□ 0.55
CHKB-201ENST00000406938 SFXN2Q96NB2 322 aa18.47■□□□□ 0.55
CHKB-201ENST00000406938 RDH12Q96NR8 316 aa18.47■□□□□ 0.55
CHKB-201ENST00000406938 MBOAT4Q96T53 435 aa18.47■□□□□ 0.55
CHKB-201ENST00000406938 PTDSS2Q9BVG9 487 aa18.47■□□□□ 0.55
CHKB-201ENST00000406938 REV1Q9UBZ9 1251 aa18.47■□□□□ 0.55
CHKB-201ENST00000406938 EFCAB9A8MZ26 197 aa18.46■□□□□ 0.55
CHKB-201ENST00000406938 SOX14O95416 240 aa18.46■□□□□ 0.55
CHKB-201ENST00000406938 CH25HO95992 272 aa18.46■□□□□ 0.55
CHKB-201ENST00000406938 TFPIP10646 304 aa18.46■□□□□ 0.55
CHKB-201ENST00000406938 CDH2P19022 906 aaPredicted RBP18.46■□□□□ 0.55
CHKB-201ENST00000406938 ZNF74Q16587 644 aa18.46■□□□□ 0.55
CHKB-201ENST00000406938 C10orf53Q8N6V4 93 aa18.46■□□□□ 0.55
CHKB-201ENST00000406938 SLC25A43Q8WUT9 341 aaPredicted RBP18.46■□□□□ 0.55
CHKB-201ENST00000406938 TAAR8Q969N4 342 aa18.46■□□□□ 0.55
CHKB-201ENST00000406938 ARL5BQ96KC2 179 aa18.46■□□□□ 0.55
CHKB-201ENST00000406938 MOGAT1Q96PD6 335 aa18.46■□□□□ 0.55
CHKB-201ENST00000406938 RIBC2Q9H4K1 309 aa18.46■□□□□ 0.55
CHKB-201ENST00000406938 ZNF71Q9NQZ8 489 aaPredicted RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms