RNA–Protein interactions for RNA: ENST00000405954.1

DUSP28-202, Transcript of dual specificity phosphatase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP28, Length 3,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-202ENST00000405954 MARCH2Q9P0N8 246 aa13.03□□□□□ -0.32
DUSP28-202ENST00000405954 MRPS23Q9Y3D9 190 aaKnown RBP13.03□□□□□ -0.32
DUSP28-202ENST00000405954 CARNS1A5YM72 827 aa13.03□□□□□ -0.32
DUSP28-202ENST00000405954 SFTA3P0C7M3 94 aa13.03□□□□□ -0.32
DUSP28-202ENST00000405954 ADH6P28332 368 aa13.03□□□□□ -0.32
DUSP28-202ENST00000405954 DDTP30046 118 aa13.03□□□□□ -0.32
DUSP28-202ENST00000405954 SPAM1P38567 509 aa13.03□□□□□ -0.32
DUSP28-202ENST00000405954 KLF9Q13886 244 aaPredicted RBP13.03□□□□□ -0.32
DUSP28-202ENST00000405954 IHHQ14623 411 aa13.03□□□□□ -0.32
DUSP28-202ENST00000405954 YOD1Q5VVQ6 348 aaPredicted RBP13.03□□□□□ -0.32
DUSP28-202ENST00000405954 FRRS1Q6ZNA5 592 aa13.03□□□□□ -0.32
DUSP28-202ENST00000405954 NR2C2APQ86WQ0 139 aa13.03□□□□□ -0.32
DUSP28-202ENST00000405954 GPC2Q8N158 579 aa13.03□□□□□ -0.32
DUSP28-202ENST00000405954 PARP12Q9H0J9 701 aaKnown RBP13.03□□□□□ -0.32
DUSP28-202ENST00000405954 KLHL28Q9NXS3 571 aa13.03□□□□□ -0.32
DUSP28-202ENST00000405954 VSX1Q9NZR4 365 aaPredicted RBP13.03□□□□□ -0.32
DUSP28-202ENST00000405954 SH2B3Q9UQQ2 575 aa13.03□□□□□ -0.32
DUSP28-202ENST00000405954 C17orf113A0A1B0GUU1 675 aa13.03□□□□□ -0.32
DUSP28-202ENST00000405954 C5orf52A6NGY3 159 aa13.03□□□□□ -0.32
DUSP28-202ENST00000405954 ACOT7O00154 380 aa13.03□□□□□ -0.32
DUSP28-202ENST00000405954 PPP1R2P9O14990 202 aa13.03□□□□□ -0.32
DUSP28-202ENST00000405954 SCN2BO60939 215 aa13.03□□□□□ -0.32
DUSP28-202ENST00000405954 SLC2A10O95528 541 aa13.03□□□□□ -0.32
DUSP28-202ENST00000405954 SERPINA5P05154 406 aa13.03□□□□□ -0.32
DUSP28-202ENST00000405954 IRF4Q15306 451 aa13.03□□□□□ -0.32
DUSP28-202ENST00000405954 ENPP7Q6UWV6 458 aa13.03□□□□□ -0.32
DUSP28-202ENST00000405954 LRRC70Q7Z2Q7 622 aa13.03□□□□□ -0.32
DUSP28-202ENST00000405954 ADCK2Q7Z695 626 aa13.03□□□□□ -0.32
DUSP28-202ENST00000405954 LINC01465Q8N7H1 131 aa13.03□□□□□ -0.32
DUSP28-202ENST00000405954 OR51S1Q8NGJ8 323 aa13.03□□□□□ -0.32
DUSP28-202ENST00000405954 OR51Q1Q8NH59 317 aa13.03□□□□□ -0.32
DUSP28-202ENST00000405954 VEGFDO43915 354 aa13.02□□□□□ -0.32
DUSP28-202ENST00000405954 FBXO24O75426 580 aa13.02□□□□□ -0.32
DUSP28-202ENST00000405954 MED6O75586 246 aa13.02□□□□□ -0.32
DUSP28-202ENST00000405954 DCNP07585 359 aaKnown RBP13.02□□□□□ -0.32
DUSP28-202ENST00000405954 SAGP10523 405 aaPredicted RBP13.02□□□□□ -0.32
DUSP28-202ENST00000405954 CPN1P15169 458 aa13.02□□□□□ -0.32
DUSP28-202ENST00000405954 ZNF44P15621 663 aa13.02□□□□□ -0.32
DUSP28-202ENST00000405954 MST1P26927 711 aa13.02□□□□□ -0.32
DUSP28-202ENST00000405954 MPIP34949 423 aa13.02□□□□□ -0.32
DUSP28-202ENST00000405954 RNF144AP50876 292 aaPredicted RBP13.02□□□□□ -0.32
DUSP28-202ENST00000405954 ADAM8P78325 824 aa13.02□□□□□ -0.32
DUSP28-202ENST00000405954 BATFQ16520 125 aa13.02□□□□□ -0.32
DUSP28-202ENST00000405954 TP53I3Q53FA7 332 aa13.02□□□□□ -0.32
DUSP28-202ENST00000405954 TMEM255AQ5JRV8 349 aa13.02□□□□□ -0.32
DUSP28-202ENST00000405954 PRSS55Q6UWB4 352 aaPredicted RBP13.02□□□□□ -0.32
DUSP28-202ENST00000405954 PPTC7Q8NI37 304 aa13.02□□□□□ -0.32
DUSP28-202ENST00000405954 C14orf144Q96I85 54 aa13.02□□□□□ -0.32
DUSP28-202ENST00000405954 GAL3ST4Q96RP7 486 aa13.02□□□□□ -0.32
DUSP28-202ENST00000405954 SMG9Q9H0W8 520 aaKnown RBP13.02□□□□□ -0.32
DUSP28-202ENST00000405954 ZFYVE1Q9HBF4 777 aa13.02□□□□□ -0.32
DUSP28-202ENST00000405954 RHOFQ9HBH0 211 aa13.02□□□□□ -0.32
DUSP28-202ENST00000405954 FGF20Q9NP95 211 aaPredicted RBP13.02□□□□□ -0.32
DUSP28-202ENST00000405954 EPHA6Q9UF33 1036 aa13.02□□□□□ -0.32
DUSP28-202ENST00000405954 NPTNQ9Y639 398 aa13.02□□□□□ -0.32
DUSP28-202ENST00000405954 URGCP-MRPS24S4R325 110 aa13.02□□□□□ -0.32
DUSP28-202ENST00000405954 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.02□□□□□ -0.33
DUSP28-202ENST00000405954 GXYLT2A0PJZ3 443 aa13.02□□□□□ -0.33
DUSP28-202ENST00000405954 FAM86C2PA6NEL3 165 aa13.02□□□□□ -0.33
DUSP28-202ENST00000405954 ANTXRLA6NF34 631 aa13.02□□□□□ -0.33
DUSP28-202ENST00000405954 GCM2O75603 506 aaPredicted RBP13.02□□□□□ -0.33
DUSP28-202ENST00000405954 STXBP1P61764 594 aaKnown RBP13.02□□□□□ -0.33
DUSP28-202ENST00000405954 ZNF616Q08AN1 781 aa13.02□□□□□ -0.33
DUSP28-202ENST00000405954 ZNF177Q13360 481 aaPredicted RBP13.02□□□□□ -0.33
DUSP28-202ENST00000405954 SERINC3Q13530 473 aa13.02□□□□□ -0.33
DUSP28-202ENST00000405954 MS4A13Q5J8X5 152 aa13.02□□□□□ -0.33
DUSP28-202ENST00000405954 HIST2H3AQ71DI3 136 aa13.02□□□□□ -0.33
DUSP28-202ENST00000405954 GAREM2Q75VX8 874 aa13.02□□□□□ -0.33
DUSP28-202ENST00000405954 NXPE1Q8N323 547 aa13.02□□□□□ -0.33
DUSP28-202ENST00000405954 FUBP3Q96I24 572 aaKnown RBP eCLIP13.02□□□□□ -0.33
DUSP28-202ENST00000405954 PPP1R16AQ96I34 528 aa13.02□□□□□ -0.33
DUSP28-202ENST00000405954 UBL7Q96S82 380 aaPredicted RBP13.02□□□□□ -0.33
DUSP28-202ENST00000405954 ALX4Q9H161 411 aaPredicted RBP13.02□□□□□ -0.33
DUSP28-202ENST00000405954 TESQ9UGI8 421 aaKnown RBP13.02□□□□□ -0.33
DUSP28-202ENST00000405954 GNG8Q9UK08 70 aa13.02□□□□□ -0.33
DUSP28-202ENST00000405954 TRBV2A0A0J9YWF9 115 aa13.01□□□□□ -0.33
DUSP28-202ENST00000405954 RFPL4AA6NLU0 287 aa13.01□□□□□ -0.33
DUSP28-202ENST00000405954 RFPL4AL1F8VTS6 287 aa13.01□□□□□ -0.33
DUSP28-202ENST00000405954 GABARAPH6UMI1 98 aa13.01□□□□□ -0.33
DUSP28-202ENST00000405954 FFAR1O14842 300 aa13.01□□□□□ -0.33
DUSP28-202ENST00000405954 KCNAB3O43448 404 aa13.01□□□□□ -0.33
DUSP28-202ENST00000405954 MBTPS2O43462 519 aa13.01□□□□□ -0.33
DUSP28-202ENST00000405954 IL3P08700 152 aa13.01□□□□□ -0.33
DUSP28-202ENST00000405954 IDSP22304 550 aa13.01□□□□□ -0.33
DUSP28-202ENST00000405954 ACTR1AP61163 376 aa13.01□□□□□ -0.33
DUSP28-202ENST00000405954 ACVR1Q04771 509 aa13.01□□□□□ -0.33
DUSP28-202ENST00000405954 RELQ04864 619 aaPredicted RBP13.01□□□□□ -0.33
DUSP28-202ENST00000405954 CBFBQ13951 182 aa13.01□□□□□ -0.33
DUSP28-202ENST00000405954 SURF2Q15527 256 aaPredicted RBP13.01□□□□□ -0.33
DUSP28-202ENST00000405954 OR8G1Q15617 311 aa13.01□□□□□ -0.33
DUSP28-202ENST00000405954 CCL14Q16627 93 aa13.01□□□□□ -0.33
DUSP28-202ENST00000405954 TRAPPC5Q8IUR0 188 aa13.01□□□□□ -0.33
DUSP28-202ENST00000405954 POMGNT2Q8NAT1 580 aa13.01□□□□□ -0.33
DUSP28-202ENST00000405954 CYB561A3Q8NBI2 242 aa13.01□□□□□ -0.33
DUSP28-202ENST00000405954 OR2G2Q8NGZ5 317 aa13.01□□□□□ -0.33
DUSP28-202ENST00000405954 MS4A4AQ96JQ5 239 aa13.01□□□□□ -0.33
DUSP28-202ENST00000405954 NPDC1Q9NQX5 325 aaPredicted RBP13.01□□□□□ -0.33
DUSP28-202ENST00000405954 FAM86C1Q9NVL1 165 aa13.01□□□□□ -0.33
DUSP28-202ENST00000405954 PRSS21Q9Y6M0 314 aa13.01□□□□□ -0.33
DUSP28-202ENST00000405954 BRCA1P38398 1863 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms