RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 MTHFD2LQ9H903 347 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P20-201ENST00000402555 VIPAS39Q9H9C1 493 aa5.13□□□□□ -1.59
HMGB1P20-201ENST00000402555 NPHS2Q9NP85 383 aa5.13□□□□□ -1.59
HMGB1P20-201ENST00000402555 TIGARQ9NQ88 270 aa5.13□□□□□ -1.59
HMGB1P20-201ENST00000402555 PLSCR4Q9NRQ2 329 aa5.13□□□□□ -1.59
HMGB1P20-201ENST00000402555 ELOVL5Q9NYP7 299 aa5.13□□□□□ -1.59
HMGB1P20-201ENST00000402555 SLC25A37Q9NYZ2 338 aa5.13□□□□□ -1.59
HMGB1P20-201ENST00000402555 CCDC167Q9P0B6 97 aa5.13□□□□□ -1.59
HMGB1P20-201ENST00000402555 KLHL13Q9P2N7 655 aa5.13□□□□□ -1.59
HMGB1P20-201ENST00000402555 P2RX2Q9UBL9 471 aa5.13□□□□□ -1.59
HMGB1P20-201ENST00000402555 NDRG3Q9UGV2 375 aa5.13□□□□□ -1.59
HMGB1P20-201ENST00000402555 ST6GALNAC2Q9UJ37 374 aa5.13□□□□□ -1.59
HMGB1P20-201ENST00000402555 DCTN4Q9UJW0 460 aa5.13□□□□□ -1.59
HMGB1P20-201ENST00000402555 ING1Q9UK53 422 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P20-201ENST00000402555 SLC35A3Q9Y2D2 325 aa5.13□□□□□ -1.59
HMGB1P20-201ENST00000402555 CHST2Q9Y4C5 530 aa5.13□□□□□ -1.59
HMGB1P20-201ENST00000402555 NIPBLQ6KC79 2804 aaeCLIP5.12□□□□□ -1.59
HMGB1P20-201ENST00000402555 ZANQ9Y493 2812 aa5.12□□□□□ -1.59
HMGB1P20-201ENST00000402555 A0A096LPI6 279 aa5.12□□□□□ -1.59
HMGB1P20-201ENST00000402555 TMED7-TICAM2A0A0A6YYA0 188 aa5.12□□□□□ -1.59
HMGB1P20-201ENST00000402555 ZC3H12DA2A288 527 aaKnown RBP5.12□□□□□ -1.59
HMGB1P20-201ENST00000402555 CDHR4A6H8M9 788 aa5.12□□□□□ -1.59
HMGB1P20-201ENST00000402555 CFAP73A6NFT4 308 aa5.12□□□□□ -1.59
HMGB1P20-201ENST00000402555 ZNF814B7Z6K7 855 aa5.12□□□□□ -1.59
HMGB1P20-201ENST00000402555 SULT2B1O00204 365 aa5.12□□□□□ -1.59
HMGB1P20-201ENST00000402555 CLIC1O00299 241 aa5.12□□□□□ -1.59
HMGB1P20-201ENST00000402555 FRS3O43559 492 aa5.12□□□□□ -1.59
HMGB1P20-201ENST00000402555 RAMP1O60894 148 aa5.12□□□□□ -1.59
HMGB1P20-201ENST00000402555 DEAF1O75398 565 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P20-201ENST00000402555 ATE1O95260 518 aa5.12□□□□□ -1.59
HMGB1P20-201ENST00000402555 DBIP07108 87 aaKnown RBP5.12□□□□□ -1.59
HMGB1P20-201ENST00000402555 YES1P07947 543 aa5.12□□□□□ -1.59
HMGB1P20-201ENST00000402555 PABPC4LP0CB38 370 aaKnown RBP5.12□□□□□ -1.59
HMGB1P20-201ENST00000402555 NCF2P19878 526 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P20-201ENST00000402555 CRYGSP22914 178 aa5.12□□□□□ -1.59
HMGB1P20-201ENST00000402555 DNASE1P24855 282 aa5.12□□□□□ -1.59
HMGB1P20-201ENST00000402555 LOXP28300 417 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P20-201ENST00000402555 TACR3P29371 465 aa5.12□□□□□ -1.59
HMGB1P20-201ENST00000402555 APOBEC1P41238 236 aaKnown RBP5.12□□□□□ -1.59
HMGB1P20-201ENST00000402555 MRPL19P49406 292 aaKnown RBP5.12□□□□□ -1.59
HMGB1P20-201ENST00000402555 CRISP3P54108 245 aa5.12□□□□□ -1.59
HMGB1P20-201ENST00000402555 OR2B6P58173 313 aa5.12□□□□□ -1.59
HMGB1P20-201ENST00000402555 RAC3P60763 192 aa5.12□□□□□ -1.59
HMGB1P20-201ENST00000402555 HOXC5Q00444 222 aa5.12□□□□□ -1.59
HMGB1P20-201ENST00000402555 RASGEF1BQ0VAM2 473 aa5.12□□□□□ -1.59
HMGB1P20-201ENST00000402555 EPS8Q12929 822 aa5.12□□□□□ -1.59
HMGB1P20-201ENST00000402555 BNIP2Q12982 314 aa5.12□□□□□ -1.59
HMGB1P20-201ENST00000402555 RNPS1Q15287 305 aaKnown RBP5.12□□□□□ -1.59
HMGB1P20-201ENST00000402555 RGNQ15493 299 aa5.12□□□□□ -1.59
HMGB1P20-201ENST00000402555 SWI5Q1ZZU3 235 aa5.12□□□□□ -1.59
HMGB1P20-201ENST00000402555 PAMR1Q6UXH9 720 aa5.12□□□□□ -1.59
HMGB1P20-201ENST00000402555 TFAP2EQ6VUC0 442 aa5.12□□□□□ -1.59
HMGB1P20-201ENST00000402555 TMPPEQ6ZT21 453 aa5.12□□□□□ -1.59
HMGB1P20-201ENST00000402555 GRINAQ7Z429 371 aa5.12□□□□□ -1.59
HMGB1P20-201ENST00000402555 STK32CQ86UX6 486 aa5.12□□□□□ -1.59
HMGB1P20-201ENST00000402555 CXorf67Q86X51 503 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P20-201ENST00000402555 TREML1Q86YW5 311 aa5.12□□□□□ -1.59
HMGB1P20-201ENST00000402555 CMIPQ8IY22 773 aa5.12□□□□□ -1.59
HMGB1P20-201ENST00000402555 PEX5LQ8IYB4 626 aa5.12□□□□□ -1.59
HMGB1P20-201ENST00000402555 CADM2Q8N3J6 435 aa5.12□□□□□ -1.59
HMGB1P20-201ENST00000402555 NFKBIDQ8NI38 313 aa5.12□□□□□ -1.59
HMGB1P20-201ENST00000402555 WFDC12Q8WWY7 111 aa5.12□□□□□ -1.59
HMGB1P20-201ENST00000402555 OIT3Q8WWZ8 545 aa5.12□□□□□ -1.59
HMGB1P20-201ENST00000402555 SPDL1Q96EA4 605 aa5.12□□□□□ -1.59
HMGB1P20-201ENST00000402555 MAGEB18Q96M61 343 aa5.12□□□□□ -1.59
HMGB1P20-201ENST00000402555 PSD2Q9BQI7 771 aa5.12□□□□□ -1.59
HMGB1P20-201ENST00000402555 RSPO3Q9BXY4 272 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P20-201ENST00000402555 ACTR6Q9GZN1 396 aa5.12□□□□□ -1.59
HMGB1P20-201ENST00000402555 SLC52A3Q9NQ40 469 aa5.12□□□□□ -1.59
HMGB1P20-201ENST00000402555 EXOSC3Q9NQT5 275 aaKnown RBP5.12□□□□□ -1.59
HMGB1P20-201ENST00000402555 SERINC1Q9NRX5 453 aa5.12□□□□□ -1.59
HMGB1P20-201ENST00000402555 GLRX2Q9NS18 164 aa5.12□□□□□ -1.59
HMGB1P20-201ENST00000402555 ZNF446Q9NWS9 450 aa5.12□□□□□ -1.59
HMGB1P20-201ENST00000402555 VAPAQ9P0L0 249 aa5.12□□□□□ -1.59
HMGB1P20-201ENST00000402555 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P20-201ENST00000402555 CHRNA9Q9UGM1 479 aa5.12□□□□□ -1.59
HMGB1P20-201ENST00000402555 PRSS50Q9UI38 385 aa5.12□□□□□ -1.59
HMGB1P20-201ENST00000402555 OSGIN1Q9UJX0 560 aa5.12□□□□□ -1.59
HMGB1P20-201ENST00000402555 ZNF443Q9Y2A4 671 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P20-201ENST00000402555 TMED7Q9Y3B3 224 aa5.12□□□□□ -1.59
HMGB1P20-201ENST00000402555 DSPPQ9NZW4 1301 aa5.12□□□□□ -1.59
HMGB1P20-201ENST00000402555 ALPK2Q86TB3 2170 aa5.12□□□□□ -1.59
HMGB1P20-201ENST00000402555 CSPG4Q6UVK1 2322 aa5.12□□□□□ -1.59
HMGB1P20-201ENST00000402555 NAV3Q8IVL0 2385 aa5.12□□□□□ -1.59
HMGB1P20-201ENST00000402555 DSCAMO60469 2012 aa5.11□□□□□ -1.59
HMGB1P20-201ENST00000402555 TRBV5-3A0A0A0MS03 114 aa5.11□□□□□ -1.59
HMGB1P20-201ENST00000402555 A0A0G2JND7 137 aa5.11□□□□□ -1.59
HMGB1P20-201ENST00000402555 A0A0G2JPF8 293 aa5.11□□□□□ -1.59
HMGB1P20-201ENST00000402555 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P20-201ENST00000402555 ZNF716A6NP11 495 aa5.11□□□□□ -1.59
HMGB1P20-201ENST00000402555 HNRNPCL2B2RXH8 293 aa5.11□□□□□ -1.59
HMGB1P20-201ENST00000402555 HNRNPCL3B7ZW38 293 aa5.11□□□□□ -1.59
HMGB1P20-201ENST00000402555 KLF4O43474 513 aa5.11□□□□□ -1.59
HMGB1P20-201ENST00000402555 CYTIPO60759 359 aa5.11□□□□□ -1.59
HMGB1P20-201ENST00000402555 HNRNPCL1O60812 293 aaKnown RBP5.11□□□□□ -1.59
HMGB1P20-201ENST00000402555 EDF1O60869 148 aaKnown RBP5.11□□□□□ -1.59
HMGB1P20-201ENST00000402555 GCM2O75603 506 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P20-201ENST00000402555 PLAUP00749 431 aa5.11□□□□□ -1.59
HMGB1P20-201ENST00000402555 ADAP00813 363 aa5.11□□□□□ -1.59
HMGB1P20-201ENST00000402555 IGHV3-9P01782 118 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms