RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 C8orf82Q6P1X6 216 aaPredicted RBP17.13■□□□□ 0.33
RTN4-207ENST00000402434 ERICH5Q6P6B1 374 aa17.13■□□□□ 0.33
RTN4-207ENST00000402434 ZNF474Q6S9Z5 364 aaPredicted RBP17.13■□□□□ 0.33
RTN4-207ENST00000402434 HACD2Q6Y1H2 254 aa17.13■□□□□ 0.33
RTN4-207ENST00000402434 ARPINQ7Z6K5 226 aa17.13■□□□□ 0.33
RTN4-207ENST00000402434 KIF18BQ86Y91 864 aa17.13■□□□□ 0.33
RTN4-207ENST00000402434 OR6K3Q8NGY3 331 aa17.13■□□□□ 0.33
RTN4-207ENST00000402434 C3orf49Q96BT1 292 aa17.13■□□□□ 0.33
RTN4-207ENST00000402434 KLHL28Q9NXS3 571 aa17.13■□□□□ 0.33
RTN4-207ENST00000402434 GALNT8Q9NY28 637 aa17.13■□□□□ 0.33
RTN4-207ENST00000402434 TMEM181Q9P2C4 612 aa17.13■□□□□ 0.33
RTN4-207ENST00000402434 ING1Q9UK53 422 aaPredicted RBP17.13■□□□□ 0.33
RTN4-207ENST00000402434 AP3M1Q9Y2T2 418 aa17.13■□□□□ 0.33
RTN4-207ENST00000402434 SMAD9O15198 467 aaKnown RBP17.12■□□□□ 0.33
RTN4-207ENST00000402434 CYTIPO60759 359 aa17.12■□□□□ 0.33
RTN4-207ENST00000402434 SMNDC1O75940 238 aaKnown RBP eCLIP17.12■□□□□ 0.332e-15■■■□□ 16
RTN4-207ENST00000402434 LGI1O95970 557 aa17.12■□□□□ 0.33
RTN4-207ENST00000402434 KCNJ5P48544 419 aa17.12■□□□□ 0.33
RTN4-207ENST00000402434 CTBP2P56545 445 aa17.12■□□□□ 0.33
RTN4-207ENST00000402434 H3F3AP84243 136 aa17.12■□□□□ 0.33
RTN4-207ENST00000402434 ATG4DQ86TL0 474 aaPredicted RBP17.12■□□□□ 0.33
RTN4-207ENST00000402434 SLC15A3Q8IY34 581 aa17.12■□□□□ 0.33
RTN4-207ENST00000402434 SMYD1Q8NB12 490 aa17.12■□□□□ 0.33
RTN4-207ENST00000402434 GPR32P1Q8NGA4 272 aa17.12■□□□□ 0.33
RTN4-207ENST00000402434 TAMM41Q96BW9 452 aa17.12■□□□□ 0.33
RTN4-207ENST00000402434 C14orf79Q96F83 325 aa17.12■□□□□ 0.33
RTN4-207ENST00000402434 HOPXQ9BPY8 73 aaPredicted RBP17.12■□□□□ 0.33
RTN4-207ENST00000402434 WFDC6Q9BQY6 131 aa17.12■□□□□ 0.33
RTN4-207ENST00000402434 POTEKPQ9BYX7 375 aa17.12■□□□□ 0.33
RTN4-207ENST00000402434 BCO1Q9HAY6 547 aa17.12■□□□□ 0.33
RTN4-207ENST00000402434 CMTM6Q9NX76 183 aa17.12■□□□□ 0.33
RTN4-207ENST00000402434 KLHL13Q9P2N7 655 aa17.12■□□□□ 0.33
RTN4-207ENST00000402434 KCNN3Q9UGI6 736 aa17.12■□□□□ 0.33
RTN4-207ENST00000402434 ZC3H12DA2A288 527 aaKnown RBP17.12■□□□□ 0.33
RTN4-207ENST00000402434 NPIPB7O75200 414 aa17.12■□□□□ 0.33
RTN4-207ENST00000402434 OPN1SWP03999 348 aa17.12■□□□□ 0.33
RTN4-207ENST00000402434 FESP07332 822 aa17.12■□□□□ 0.33
RTN4-207ENST00000402434 HTR2AP28223 471 aa17.12■□□□□ 0.33
RTN4-207ENST00000402434 AGTR1P30556 359 aa17.12■□□□□ 0.33
RTN4-207ENST00000402434 CPA2P48052 419 aa17.12■□□□□ 0.33
RTN4-207ENST00000402434 C6orf89Q6UWU4 347 aa17.12■□□□□ 0.33
RTN4-207ENST00000402434 ANKS4BQ8N8V4 417 aa17.12■□□□□ 0.33
RTN4-207ENST00000402434 ZNF610Q8N9Z0 462 aa17.12■□□□□ 0.33
RTN4-207ENST00000402434 CCT8L2Q96SF2 557 aa17.12■□□□□ 0.33
RTN4-207ENST00000402434 TRIM2Q9C040 744 aa17.12■□□□□ 0.33
RTN4-207ENST00000402434 OPN3Q9H1Y3 402 aaPredicted RBP17.12■□□□□ 0.33
RTN4-207ENST00000402434 C12orf10Q9HB07 376 aa17.12■□□□□ 0.33
RTN4-207ENST00000402434 KLHL9Q9P2J3 617 aa17.12■□□□□ 0.33
RTN4-207ENST00000402434 TESQ9UGI8 421 aaKnown RBP17.12■□□□□ 0.33
RTN4-207ENST00000402434 SLC13A4Q9UKG4 626 aa17.12■□□□□ 0.33
RTN4-207ENST00000402434 PROCRQ9UNN8 238 aa17.12■□□□□ 0.33
RTN4-207ENST00000402434 USP22Q9UPT9 525 aa17.12■□□□□ 0.33
RTN4-207ENST00000402434 APCP25054 2843 aa17.11■□□□□ 0.33
RTN4-207ENST00000402434 IGHV3-15A0A0B4J1V0 119 aa17.11■□□□□ 0.33
RTN4-207ENST00000402434 CCT8L1PA6NM43 557 aa17.11■□□□□ 0.33
RTN4-207ENST00000402434 A8MVM7 634 aa17.11■□□□□ 0.33
RTN4-207ENST00000402434 FAM220BPB1ANY3 271 aa17.11■□□□□ 0.33
RTN4-207ENST00000402434 TMEM229AB2RXF0 380 aa17.11■□□□□ 0.33
RTN4-207ENST00000402434 TPST2O60704 377 aa17.11■□□□□ 0.33
RTN4-207ENST00000402434 YES1P07947 543 aa17.11■□□□□ 0.33
RTN4-207ENST00000402434 IMPDH2P12268 514 aa17.11■□□□□ 0.33
RTN4-207ENST00000402434 KLK2P20151 261 aa17.11■□□□□ 0.33
RTN4-207ENST00000402434 CD247P20963 164 aa17.11■□□□□ 0.33
RTN4-207ENST00000402434 RGS8P57771 180 aaPredicted RBP17.11■□□□□ 0.33
RTN4-207ENST00000402434 PDK3Q15120 406 aa17.11■□□□□ 0.33
RTN4-207ENST00000402434 NRF1Q16656 503 aa17.11■□□□□ 0.33
RTN4-207ENST00000402434 GDF7Q7Z4P5 450 aa17.11■□□□□ 0.33
RTN4-207ENST00000402434 TUSC5Q8IXB3 177 aa17.11■□□□□ 0.33
RTN4-207ENST00000402434 OR2T12Q8NG77 320 aa17.11■□□□□ 0.33
RTN4-207ENST00000402434 OR52E4Q8NGH9 312 aa17.11■□□□□ 0.33
RTN4-207ENST00000402434 RASSF5Q8WWW0 418 aa17.11■□□□□ 0.33
RTN4-207ENST00000402434 LRRC37BQ96QE4 947 aa17.11■□□□□ 0.33
RTN4-207ENST00000402434 PSD2Q9BQI7 771 aa17.11■□□□□ 0.33
RTN4-207ENST00000402434 ZNF559Q9BR84 538 aa17.11■□□□□ 0.33
RTN4-207ENST00000402434 TACO1Q9BSH4 297 aaKnown RBP17.11■□□□□ 0.33
RTN4-207ENST00000402434 FBN2P35556 2912 aa17.1■□□□□ 0.33
RTN4-207ENST00000402434 A0A1B0GWA3 101 aa17.1■□□□□ 0.33
RTN4-207ENST00000402434 EIF1BO60739 113 aaKnown RBP17.1■□□□□ 0.33
RTN4-207ENST00000402434 FMO6PO60774 539 aa17.1■□□□□ 0.33
RTN4-207ENST00000402434 SSTR2P30874 369 aa17.1■□□□□ 0.33
RTN4-207ENST00000402434 KIR2DL3P43628 341 aa17.1■□□□□ 0.33
RTN4-207ENST00000402434 SLC35A1P78382 337 aa17.1■□□□□ 0.33
RTN4-207ENST00000402434 RASGEF1BQ0VAM2 473 aa17.1■□□□□ 0.33
RTN4-207ENST00000402434 BNIP2Q12982 314 aa17.1■□□□□ 0.33
RTN4-207ENST00000402434 SNTB1Q13884 538 aaKnown RBP17.1■□□□□ 0.33
RTN4-207ENST00000402434 TMEM201Q5SNT2 666 aa17.1■□□□□ 0.33
RTN4-207ENST00000402434 FAM91A1Q658Y4 838 aa17.1■□□□□ 0.33
RTN4-207ENST00000402434 ABLIM2Q6H8Q1 611 aa17.1■□□□□ 0.33
RTN4-207ENST00000402434 LSRQ86X29 649 aaPredicted RBP17.1■□□□□ 0.33
RTN4-207ENST00000402434 STK35Q8TDR2 534 aa17.1■□□□□ 0.33
RTN4-207ENST00000402434 DNAJA4Q8WW22 397 aaPredicted RBP17.1■□□□□ 0.33
RTN4-207ENST00000402434 ZHX1-C8orf76Q96EF9 292 aa17.1■□□□□ 0.33
RTN4-207ENST00000402434 ARHGDIGQ99819 225 aa17.1■□□□□ 0.33
RTN4-207ENST00000402434 PRR14Q9BWN1 585 aa17.1■□□□□ 0.33
RTN4-207ENST00000402434 ELOVL5Q9NYP7 299 aa17.1■□□□□ 0.33
RTN4-207ENST00000402434 RPS6KB2Q9UBS0 482 aa17.1■□□□□ 0.33
RTN4-207ENST00000402434 FREM1Q5H8C1 2179 aa17.09■□□□□ 0.33
RTN4-207ENST00000402434 IGKV3D-15A0A087WSY6 115 aa17.09■□□□□ 0.33
RTN4-207ENST00000402434 ELOVL7A1L3X0 281 aa17.09■□□□□ 0.33
RTN4-207ENST00000402434 ZNF724A8MTY0 619 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms