RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 KTI12Q96EK9 354 aaPredicted RBP14.33□□□□□ -0.12
HMGA1-204ENST00000401473 POLR2J2Q9GZM3 115 aaKnown RBP14.33□□□□□ -0.12
HMGA1-204ENST00000401473 POLR2J3Q9H1A7 115 aaKnown RBP14.33□□□□□ -0.12
HMGA1-204ENST00000401473 FAM32AQ9Y421 112 aaKnown RBP14.33□□□□□ -0.12
HMGA1-204ENST00000401473 ELOA3DA6NLF2 546 aaPredicted RBP14.32□□□□□ -0.12
HMGA1-204ENST00000401473 EIF1AYO14602 144 aaKnown RBP14.32□□□□□ -0.12
HMGA1-204ENST00000401473 TNFSF11O14788 317 aa14.32□□□□□ -0.12
HMGA1-204ENST00000401473 TPOP07202 933 aa14.32□□□□□ -0.12
HMGA1-204ENST00000401473 ABOP16442 354 aa14.32□□□□□ -0.12
HMGA1-204ENST00000401473 GCKP35557 465 aa14.32□□□□□ -0.12
HMGA1-204ENST00000401473 MAP2K6P52564 334 aa14.32□□□□□ -0.12
HMGA1-204ENST00000401473 ST3GAL3Q11203 375 aa14.32□□□□□ -0.12
HMGA1-204ENST00000401473 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.32□□□□□ -0.123e-6■□□□□ 10.5
HMGA1-204ENST00000401473 ELOA3BQ3SY89 546 aa14.32□□□□□ -0.12
HMGA1-204ENST00000401473 WLSQ5T9L3 541 aa14.32□□□□□ -0.12
HMGA1-204ENST00000401473 C3P1Q6ZMU1 363 aa14.32□□□□□ -0.12
HMGA1-204ENST00000401473 Q6ZPB1 254 aaPredicted RBP14.32□□□□□ -0.12
HMGA1-204ENST00000401473 CD163Q86VB7 1156 aa14.32□□□□□ -0.12
HMGA1-204ENST00000401473 OFCC1Q8IZS5 231 aa14.32□□□□□ -0.12
HMGA1-204ENST00000401473 ELOA3Q8NG57 546 aa14.32□□□□□ -0.12
HMGA1-204ENST00000401473 TMEM255BQ8WV15 326 aa14.32□□□□□ -0.12
HMGA1-204ENST00000401473 POP5Q969H6 163 aaKnown RBP14.32□□□□□ -0.12
HMGA1-204ENST00000401473 ZNF845Q96IR2 970 aaPredicted RBP14.32□□□□□ -0.12
HMGA1-204ENST00000401473 KLHL15Q96M94 604 aa14.32□□□□□ -0.12
HMGA1-204ENST00000401473 DOCK7Q96N67 2140 aa14.32□□□□□ -0.12
HMGA1-204ENST00000401473 OR5B2Q96R09 309 aa14.32□□□□□ -0.12
HMGA1-204ENST00000401473 PIP5K1AQ99755 562 aa14.32□□□□□ -0.12
HMGA1-204ENST00000401473 FNDC11Q9BVV2 318 aa14.32□□□□□ -0.12
HMGA1-204ENST00000401473 COQ10BQ9H8M1 238 aa14.32□□□□□ -0.12
HMGA1-204ENST00000401473 TINAGQ9UJW2 476 aa14.32□□□□□ -0.12
HMGA1-204ENST00000401473 CAMK2AQ9UQM7 478 aa14.32□□□□□ -0.12
HMGA1-204ENST00000401473 INTS1Q8N201 2190 aaKnown RBP14.32□□□□□ -0.12
HMGA1-204ENST00000401473 SPTBN1Q01082 2364 aaKnown RBP14.32□□□□□ -0.12
HMGA1-204ENST00000401473 ARHGAP21Q5T5U3 1957 aa14.32□□□□□ -0.12
HMGA1-204ENST00000401473 A8MVM7 634 aa14.31□□□□□ -0.12
HMGA1-204ENST00000401473 BCKDKO14874 412 aa14.31□□□□□ -0.12
HMGA1-204ENST00000401473 ENTPD5O75356 428 aa14.31□□□□□ -0.12
HMGA1-204ENST00000401473 THRBP10828 461 aa14.31□□□□□ -0.12
HMGA1-204ENST00000401473 ITGA2P17301 1181 aa14.31□□□□□ -0.12
HMGA1-204ENST00000401473 MYBPHQ13203 477 aa14.31□□□□□ -0.12
HMGA1-204ENST00000401473 EIF2S3LQ2VIR3 472 aaKnown RBP14.31□□□□□ -0.12
HMGA1-204ENST00000401473 ZNF585AQ6P3V2 769 aa14.31□□□□□ -0.12
HMGA1-204ENST00000401473 ESPNLQ6ZVH7 1005 aa14.31□□□□□ -0.12
HMGA1-204ENST00000401473 PIK3C3Q8NEB9 887 aa14.31□□□□□ -0.12
HMGA1-204ENST00000401473 OR52J3Q8NH60 311 aa14.31□□□□□ -0.12
HMGA1-204ENST00000401473 SLC7A13Q8TCU3 470 aa14.31□□□□□ -0.12
HMGA1-204ENST00000401473 DUS3LQ96G46 650 aaKnown RBP14.31□□□□□ -0.12
HMGA1-204ENST00000401473 DHRS1Q96LJ7 313 aa14.31□□□□□ -0.12
HMGA1-204ENST00000401473 TUBA1CQ9BQE3 449 aa14.31□□□□□ -0.12
HMGA1-204ENST00000401473 MEPEQ9NQ76 525 aaPredicted RBP14.31□□□□□ -0.12
HMGA1-204ENST00000401473 SELENONQ9NZV5 590 aa14.31□□□□□ -0.12
HMGA1-204ENST00000401473 STOML1Q9UBI4 398 aa14.31□□□□□ -0.12
HMGA1-204ENST00000401473 TESMINQ9Y4I5 508 aa14.31□□□□□ -0.12
HMGA1-204ENST00000401473 PHF3Q92576 2039 aaKnown RBP14.31□□□□□ -0.12
HMGA1-204ENST00000401473 LRRK2Q5S007 2527 aa14.31□□□□□ -0.12
HMGA1-204ENST00000401473 TFPIP10646 304 aa14.31□□□□□ -0.12
HMGA1-204ENST00000401473 IMPDH2P12268 514 aa14.31□□□□□ -0.12
HMGA1-204ENST00000401473 PPP1R8Q12972 351 aaKnown RBP14.31□□□□□ -0.12
HMGA1-204ENST00000401473 RTL6Q6ICC9 239 aa14.31□□□□□ -0.12
HMGA1-204ENST00000401473 TBPL2Q6SJ96 375 aa14.31□□□□□ -0.12
HMGA1-204ENST00000401473 ADGRE4PQ86SQ3 457 aa14.31□□□□□ -0.12
HMGA1-204ENST00000401473 RPRMLQ8N4K4 120 aa14.31□□□□□ -0.12
HMGA1-204ENST00000401473 OR10D3Q8NH80 312 aa14.31□□□□□ -0.12
HMGA1-204ENST00000401473 SLC25A43Q8WUT9 341 aaPredicted RBP14.31□□□□□ -0.12
HMGA1-204ENST00000401473 OSTF1Q92882 214 aa14.31□□□□□ -0.12
HMGA1-204ENST00000401473 TAAR8Q969N4 342 aa14.31□□□□□ -0.12
HMGA1-204ENST00000401473 RSRC1Q96IZ7 334 aaKnown RBP14.31□□□□□ -0.12
HMGA1-204ENST00000401473 MPP4Q96JB8 637 aa14.31□□□□□ -0.12
HMGA1-204ENST00000401473 PTDSS2Q9BVG9 487 aa14.31□□□□□ -0.12
HMGA1-204ENST00000401473 A0A087WUU8 490 aa14.3□□□□□ -0.12
HMGA1-204ENST00000401473 A0A1W2PRQ8 180 aa14.3□□□□□ -0.12
HMGA1-204ENST00000401473 FKBP6O75344 327 aa14.3□□□□□ -0.12
HMGA1-204ENST00000401473 KLK2P20151 261 aa14.3□□□□□ -0.12
HMGA1-204ENST00000401473 FKBP2P26885 142 aaKnown RBP14.3□□□□□ -0.12
HMGA1-204ENST00000401473 SLC7A1P30825 629 aa14.3□□□□□ -0.12
HMGA1-204ENST00000401473 RRM2P31350 389 aa14.3□□□□□ -0.12
HMGA1-204ENST00000401473 RPS5P46782 204 aaKnown RBP14.3□□□□□ -0.12
HMGA1-204ENST00000401473 EIF1AXP47813 144 aaKnown RBP14.3□□□□□ -0.12
HMGA1-204ENST00000401473 DIO1P49895 249 aa14.3□□□□□ -0.12
HMGA1-204ENST00000401473 CARD18P57730 90 aa14.3□□□□□ -0.12
HMGA1-204ENST00000401473 DGCR6Q14129 220 aa14.3□□□□□ -0.12
HMGA1-204ENST00000401473 TMPPEQ6ZT21 453 aa14.3□□□□□ -0.12
HMGA1-204ENST00000401473 CYP4Z1Q86W10 505 aa14.3□□□□□ -0.12
HMGA1-204ENST00000401473 PM20D2Q8IYS1 436 aa14.3□□□□□ -0.12
HMGA1-204ENST00000401473 STK35Q8TDR2 534 aa14.3□□□□□ -0.12
HMGA1-204ENST00000401473 PYDC1Q8WXC3 89 aa14.3□□□□□ -0.12
HMGA1-204ENST00000401473 DDIT4LQ96D03 193 aa14.3□□□□□ -0.12
HMGA1-204ENST00000401473 ZNF347Q96SE7 839 aa14.3□□□□□ -0.12
HMGA1-204ENST00000401473 FUZQ9BT04 418 aa14.3□□□□□ -0.12
HMGA1-204ENST00000401473 SRXN1Q9BYN0 137 aa14.3□□□□□ -0.12
HMGA1-204ENST00000401473 POTEKPQ9BYX7 375 aa14.3□□□□□ -0.12
HMGA1-204ENST00000401473 VNN3Q9NY84 501 aa14.3□□□□□ -0.12
HMGA1-204ENST00000401473 OSGIN2Q9Y236 505 aa14.3□□□□□ -0.12
HMGA1-204ENST00000401473 TRBV4-1A0A0J9YWV2 114 aa14.29□□□□□ -0.12
HMGA1-204ENST00000401473 AHRRA9YTQ3 701 aa14.29□□□□□ -0.12
HMGA1-204ENST00000401473 LRRN3E7EW58 273 aa14.29□□□□□ -0.12
HMGA1-204ENST00000401473 PRRG2O14669 202 aa14.29□□□□□ -0.12
HMGA1-204ENST00000401473 CXCL13O43927 109 aa14.29□□□□□ -0.12
HMGA1-204ENST00000401473 H1F0P07305 194 aaKnown RBP14.29□□□□□ -0.12
HMGA1-204ENST00000401473 CLK1P49759 484 aaKnown RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms